Strain Fitness in Shewanella amazonensis SB2B around Sama_2467

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,972,566	-				+0.7
2,972,597	+				+0.0
2,972,662	-				+1.2
2,972,662	-				-1.0
2,972,670	-				-2.3
2,972,698	-				+0.2
2,972,698	-				-0.3
2,972,698	-				+0.2
2,972,769	-		Sama_2466	0.21	+1.8
2,972,790	-		Sama_2466	0.25	-0.3
2,972,844	-		Sama_2466	0.35	-0.3
2,972,844	-		Sama_2466	0.35	-1.2
2,972,848	-		Sama_2466	0.35	+1.2
2,972,848	-		Sama_2466	0.35	+0.4
2,972,848	-		Sama_2466	0.35	+0.0
2,972,848	-		Sama_2466	0.35	-1.1
2,972,848	-		Sama_2466	0.35	-0.2
2,972,848	-		Sama_2466	0.35	-2.0
2,972,848	-		Sama_2466	0.35	-0.9
2,972,848	-		Sama_2466	0.35	+0.0
2,972,848	-		Sama_2466	0.35	-1.9
2,972,848	-		Sama_2466	0.35	+1.2
2,972,848	-		Sama_2466	0.35	-0.3
2,973,060	-		Sama_2466	0.73	+0.7
2,973,060	-		Sama_2466	0.73	+1.2
2,973,060	-		Sama_2466	0.73	-1.0
2,973,060	-		Sama_2466	0.73	+0.8
2,973,063	-		Sama_2466	0.73	-1.7
2,973,063	-		Sama_2466	0.73	+1.0
2,973,063	-		Sama_2466	0.73	+0.5
2,973,063	-		Sama_2466	0.73	-0.5
2,973,063	-		Sama_2466	0.73	-0.8
2,973,063	-		Sama_2466	0.73	-1.1
2,973,063	-		Sama_2466	0.73	+0.5
2,973,063	-		Sama_2466	0.73	+0.5
2,973,063	-		Sama_2466	0.73	-1.0
2,973,127	-		Sama_2466	0.85	-1.4
2,973,213	-				-0.9
2,973,292	-				-0.7
2,973,297	-				+1.8
2,973,304	-				-0.9
2,973,484	+		Sama_2467	0.23	-1.5
2,973,537	+		Sama_2467	0.33	-0.6
2,973,549	+		Sama_2467	0.35	+0.1
2,973,549	+		Sama_2467	0.35	-1.4
2,973,550	-		Sama_2467	0.36	+0.2
2,973,550	-		Sama_2467	0.36	-0.4
2,973,550	-		Sama_2467	0.36	-0.8
2,973,550	-		Sama_2467	0.36	+0.8
2,973,550	-		Sama_2467	0.36	-0.4
2,973,601	+		Sama_2467	0.46	+0.5
2,973,601	+		Sama_2467	0.46	-0.9
2,973,602	-		Sama_2467	0.46	-0.4
2,973,653	+		Sama_2467	0.56	-1.4
2,973,654	-		Sama_2467	0.56	-0.7
2,973,681	+		Sama_2467	0.61	-1.8
2,973,691	+		Sama_2467	0.63	-0.4
2,973,692	-		Sama_2467	0.64	+0.0
2,973,692	-		Sama_2467	0.64	-0.5
2,973,790	+		Sama_2467	0.83	+0.2
2,973,851	-				-0.9
2,973,851	-				-0.4
2,973,877	+				-0.4
2,973,878	-				-1.0
2,973,878	-				+0.0
2,973,886	+				-0.5
2,973,886	+				-1.5
2,973,887	-				-0.9
2,973,941	-				+0.2
2,973,968	+				+0.6
2,973,968	+				-0.4
2,974,006	+				-1.0
2,974,007	-				-0.5
2,974,007	-				+1.8
2,974,031	-				-1.6
2,974,031	-				+0.0
2,974,085	+				-0.9
2,974,086	-				+0.7
2,974,086	-				+0.7
2,974,086	-				-1.6
2,974,086	-				-0.6
2,974,087	+				-0.5
2,974,087	+				-1.7
2,974,088	-				-1.0
2,974,099	+				-0.3
2,974,099	+				-1.5
2,974,099	+				+0.2
2,974,099	+				-0.1
2,974,100	-				-0.6
2,974,100	-				+0.1
2,974,114	-				+0.5
2,974,114	-				+1.0
2,974,116	+				+1.5
2,974,117	-				+0.6
2,974,183	+		Sama_2468	0.14	+0.7
2,974,183	+		Sama_2468	0.14	-2.7
2,974,183	+		Sama_2468	0.14	-1.0
2,974,184	-		Sama_2468	0.14	+0.0
2,974,184	-		Sama_2468	0.14	-1.0
2,974,184	-		Sama_2468	0.14	+0.1
2,974,184	-		Sama_2468	0.14	+0.9
2,974,184	-		Sama_2468	0.14	+0.7
2,974,187	-		Sama_2468	0.15	-0.3
2,974,320	+		Sama_2468	0.39	+0.2
2,974,320	+		Sama_2468	0.39	+0.7
2,974,320	+		Sama_2468	0.39	+0.5
2,974,321	-		Sama_2468	0.39	+2.8
2,974,321	-		Sama_2468	0.39	-0.4
2,974,321	-		Sama_2468	0.39	+0.5
2,974,321	-		Sama_2468	0.39	-0.5
2,974,347	+		Sama_2468	0.44	+0.8
2,974,347	+		Sama_2468	0.44	+0.2
2,974,347	+		Sama_2468	0.44	+0.6
2,974,347	+		Sama_2468	0.44	-2.0
2,974,348	-		Sama_2468	0.45	-1.1
2,974,348	-		Sama_2468	0.45	-0.2
2,974,348	-		Sama_2468	0.45	-0.3
2,974,348	-		Sama_2468	0.45	+0.6
2,974,362	-		Sama_2468	0.47	+0.0
2,974,431	+		Sama_2468	0.60	-0.3
2,974,431	+		Sama_2468	0.60	+1.4
2,974,432	-		Sama_2468	0.60	-0.8
2,974,432	-		Sama_2468	0.60	-1.8
2,974,432	-		Sama_2468	0.60	+0.0
2,974,432	-		Sama_2468	0.60	+0.0
2,974,432	-		Sama_2468	0.60	+0.4
2,974,432	-		Sama_2468	0.60	+0.2
2,974,436	+		Sama_2468	0.61	+0.2
2,974,436	+		Sama_2468	0.61	-0.6
2,974,437	-		Sama_2468	0.61	-1.9
2,974,437	-		Sama_2468	0.61	-1.2
2,974,437	-		Sama_2468	0.61	-0.3
2,974,444	+		Sama_2468	0.62	-0.6
2,974,448	-		Sama_2468	0.63	+0.1
2,974,448	-		Sama_2468	0.63	+0.2
2,974,448	-		Sama_2468	0.63	+0.5
2,974,448	-		Sama_2468	0.63	-1.8
2,974,455	+		Sama_2468	0.64	-2.3
2,974,455	+		Sama_2468	0.64	+2.8
2,974,456	-		Sama_2468	0.65	-1.0
2,974,456	-		Sama_2468	0.65	-0.3
2,974,465	+		Sama_2468	0.66	-1.4
2,974,466	-		Sama_2468	0.66	-0.7
2,974,466	-		Sama_2468	0.66	+0.2
2,974,525	-		Sama_2468	0.77	-2.0
2,974,535	-		Sama_2468	0.79	+1.4
2,974,587	+		Sama_2468	0.89	-0.2
2,974,588	-		Sama_2468	0.89	-0.9
2,974,594	+				-0.2
2,974,594	+				+1.4
2,974,594	+				-1.2
2,974,595	-				-1.1
2,974,650	+				+1.2
2,974,704	-				+1.5
2,974,730	+				-0.2
2,974,734	-				-1.0
2,974,740	-				-0.7
2,974,740	-				+0.1
2,974,745	+				-2.6
2,974,745	+				+0.9
2,974,745	+				-2.4
2,974,745	+				-2.0
2,974,746	-				-1.6
2,974,827	+		Sama_2469	0.15	+0.8
2,974,827	+		Sama_2469	0.15	-0.5
2,974,828	-		Sama_2469	0.15	-1.3
2,974,828	-		Sama_2469	0.15	-1.2
2,974,828	-		Sama_2469	0.15	-1.4
2,974,841	-		Sama_2469	0.17	+0.8
2,974,841	-		Sama_2469	0.17	-1.7
2,974,868	-		Sama_2469	0.22	+1.8
2,974,876	-		Sama_2469	0.24	-1.7
2,974,876	-		Sama_2469	0.24	-0.4