Strain Fitness in Shewanella amazonensis SB2B around Sama_2453

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,956,373	+		Sama_2452	0.56	-1.5
2,956,373	+		Sama_2452	0.56	-0.9
2,956,373	+		Sama_2452	0.56	-1.3
2,956,373	+		Sama_2452	0.56	-0.0
2,956,374	-		Sama_2452	0.56	-1.5
2,956,374	-		Sama_2452	0.56	-0.9
2,956,374	-		Sama_2452	0.56	+1.8
2,956,397	+		Sama_2452	0.58	+0.4
2,956,397	+		Sama_2452	0.58	+0.0
2,956,400	+		Sama_2452	0.58	-1.4
2,956,400	+		Sama_2452	0.58	+0.8
2,956,400	+		Sama_2452	0.58	+0.8
2,956,400	+		Sama_2452	0.58	-2.0
2,956,430	+		Sama_2452	0.59	-1.9
2,956,430	+		Sama_2452	0.59	-0.5
2,956,430	+		Sama_2452	0.59	-1.1
2,956,430	+		Sama_2452	0.59	-1.3
2,956,430	+		Sama_2452	0.59	-0.5
2,956,431	-		Sama_2452	0.59	-1.1
2,956,432	+		Sama_2452	0.59	+0.0
2,956,469	+		Sama_2452	0.61	+0.4
2,956,469	+		Sama_2452	0.61	-0.3
2,956,470	-		Sama_2452	0.61	-0.5
2,956,547	+		Sama_2452	0.65	+0.9
2,956,581	+		Sama_2452	0.66	-0.5
2,956,582	-		Sama_2452	0.67	+0.2
2,956,582	-		Sama_2452	0.67	-0.2
2,956,582	-		Sama_2452	0.67	-1.2
2,956,582	-		Sama_2452	0.67	-0.3
2,956,582	-		Sama_2452	0.67	-0.3
2,956,582	-		Sama_2452	0.67	+0.0
2,956,584	-		Sama_2452	0.67	-1.3
2,956,584	-		Sama_2452	0.67	-0.2
2,956,584	-		Sama_2452	0.67	-0.2
2,956,584	-		Sama_2452	0.67	-0.8
2,956,592	+		Sama_2452	0.67	-0.5
2,956,593	-		Sama_2452	0.67	-0.5
2,956,615	+		Sama_2452	0.68	+0.5
2,956,615	+		Sama_2452	0.68	-1.4
2,956,615	+		Sama_2452	0.68	-2.0
2,956,616	-		Sama_2452	0.68	-1.4
2,956,616	-		Sama_2452	0.68	-1.2
2,956,616	-		Sama_2452	0.68	-1.1
2,956,685	+		Sama_2452	0.71	-1.0
2,956,685	+		Sama_2452	0.71	-0.8
2,956,685	+		Sama_2452	0.71	-1.3
2,956,686	-		Sama_2452	0.72	-0.8
2,956,686	-		Sama_2452	0.72	-1.7
2,956,686	-		Sama_2452	0.72	+1.4
2,956,784	+		Sama_2452	0.76	-0.5
2,956,784	+		Sama_2452	0.76	-1.3
2,956,991	+		Sama_2452	0.86	-0.3
2,956,992	-		Sama_2452	0.86	-0.6
2,956,992	-		Sama_2452	0.86	+0.2
2,957,069	+				+0.4
2,957,070	-				-1.1
2,957,070	-				+0.7
2,957,070	-				+1.2
2,957,070	-				-0.4
2,957,165	-				-1.5
2,957,275	-				+0.5
2,957,275	-				-0.3
2,957,345	+				-0.8
2,957,345	+				+1.2
2,957,357	+				+0.6
2,957,369	+				-0.2
2,957,405	+				-0.3
2,957,432	+				+0.8
2,957,433	-				-1.6
2,957,433	-				-0.3
2,957,544	+		Sama_2453	0.11	-1.9
2,957,679	+		Sama_2453	0.16	-0.6
2,957,679	+		Sama_2453	0.16	-1.3
2,957,679	+		Sama_2453	0.16	+0.1
2,957,679	+		Sama_2453	0.16	-0.3
2,957,680	-		Sama_2453	0.16	-0.6
2,957,680	-		Sama_2453	0.16	-0.3
2,957,680	-		Sama_2453	0.16	-0.3
2,957,680	-		Sama_2453	0.16	+0.0
2,957,680	-		Sama_2453	0.16	-1.9
2,957,680	-		Sama_2453	0.16	-0.3
2,957,680	-		Sama_2453	0.16	+0.2
2,957,680	-		Sama_2453	0.16	+0.3
2,957,716	+		Sama_2453	0.18	-1.6
2,957,716	+		Sama_2453	0.18	-1.7
2,957,736	-		Sama_2453	0.18	+0.5
2,957,736	-		Sama_2453	0.18	+0.5
2,957,777	+		Sama_2453	0.20	-0.8
2,957,854	+		Sama_2453	0.23	+2.1
2,957,854	+		Sama_2453	0.23	-3.0
2,957,855	-		Sama_2453	0.23	-0.6
2,957,855	-		Sama_2453	0.23	-1.8
2,957,925	+		Sama_2453	0.26	-1.4
2,957,926	-		Sama_2453	0.26	+0.9
2,957,926	-		Sama_2453	0.26	-0.3
2,957,942	-		Sama_2453	0.27	+0.8
2,957,992	+		Sama_2453	0.29	+0.0
2,957,993	-		Sama_2453	0.29	-1.8
2,957,993	-		Sama_2453	0.29	+0.5
2,957,993	-		Sama_2453	0.29	+0.4
2,958,062	+		Sama_2453	0.31	+1.0
2,958,062	+		Sama_2453	0.31	+0.8
2,958,095	+		Sama_2453	0.33	-1.3
2,958,095	+		Sama_2453	0.33	+0.5
2,958,095	+		Sama_2453	0.33	-1.5
2,958,095	+		Sama_2453	0.33	+0.4
2,958,095	+		Sama_2453	0.33	-0.5
2,958,095	+		Sama_2453	0.33	+1.1
2,958,095	+		Sama_2453	0.33	-1.2
2,958,095	+		Sama_2453	0.33	-2.7
2,958,095	+		Sama_2453	0.33	-1.1
2,958,095	+		Sama_2453	0.33	-1.3
2,958,095	+		Sama_2453	0.33	-0.3
2,958,095	+		Sama_2453	0.33	+0.1
2,958,095	+		Sama_2453	0.33	+0.0
2,958,096	-		Sama_2453	0.33	-0.7
2,958,096	-		Sama_2453	0.33	-1.2
2,958,096	-		Sama_2453	0.33	+1.4
2,958,096	-		Sama_2453	0.33	-2.1
2,958,096	-		Sama_2453	0.33	-1.3
2,958,096	-		Sama_2453	0.33	-0.3
2,958,096	-		Sama_2453	0.33	-2.3
2,958,096	-		Sama_2453	0.33	-0.8
2,958,096	-		Sama_2453	0.33	-0.6
2,958,096	-		Sama_2453	0.33	-1.5
2,958,096	-		Sama_2453	0.33	-0.9
2,958,096	-		Sama_2453	0.33	-1.2
2,958,096	-		Sama_2453	0.33	-0.3
2,958,096	-		Sama_2453	0.33	+0.5
2,958,096	-		Sama_2453	0.33	-1.3
2,958,096	-		Sama_2453	0.33	-1.4
2,958,096	-		Sama_2453	0.33	+0.4
2,958,096	-		Sama_2453	0.33	-1.6
2,958,096	-		Sama_2453	0.33	+0.2
2,958,097	+		Sama_2453	0.33	+1.8
2,958,097	+		Sama_2453	0.33	+1.0
2,958,097	+		Sama_2453	0.33	-0.8
2,958,098	-		Sama_2453	0.33	-0.1
2,958,098	-		Sama_2453	0.33	-1.3
2,958,103	+		Sama_2453	0.33	-1.5
2,958,106	+		Sama_2453	0.33	-0.5
2,958,106	+		Sama_2453	0.33	-0.9
2,958,106	+		Sama_2453	0.33	+0.2
2,958,107	-		Sama_2453	0.33	+1.2
2,958,107	-		Sama_2453	0.33	+1.6
2,958,107	-		Sama_2453	0.33	+0.8
2,958,107	-		Sama_2453	0.33	+1.7
2,958,206	+		Sama_2453	0.37	-0.2
2,958,206	+		Sama_2453	0.37	-0.9
2,958,206	+		Sama_2453	0.37	+1.7
2,958,206	+		Sama_2453	0.37	+0.0
2,958,206	+		Sama_2453	0.37	+0.0
2,958,206	+		Sama_2453	0.37	-1.0
2,958,207	-		Sama_2453	0.37	-0.5
2,958,207	-		Sama_2453	0.37	-0.6
2,958,226	+		Sama_2453	0.38	-1.2
2,958,226	+		Sama_2453	0.38	+0.2
2,958,226	+		Sama_2453	0.38	-0.2
2,958,226	+		Sama_2453	0.38	-1.6
2,958,227	-		Sama_2453	0.38	+0.9
2,958,227	-		Sama_2453	0.38	-0.3
2,958,227	-		Sama_2453	0.38	-0.8
2,958,227	-		Sama_2453	0.38	-0.9
2,958,290	-		Sama_2453	0.40	+0.4
2,958,290	-		Sama_2453	0.40	-1.8
2,958,327	-		Sama_2453	0.42	+0.0
2,958,438	+		Sama_2453	0.46	-0.3
2,958,530	-		Sama_2453	0.50	+2.0
2,958,530	-		Sama_2453	0.50	+0.9
2,958,530	-		Sama_2453	0.50	-0.1
2,958,634	+		Sama_2453	0.54	-0.2
2,958,635	-		Sama_2453	0.54	+0.2
2,958,694	+		Sama_2453	0.56	-2.4
2,958,694	+		Sama_2453	0.56	+0.8
2,958,695	-		Sama_2453	0.56	+1.8
2,958,695	-		Sama_2453	0.56	-0.2
2,958,695	-		Sama_2453	0.56	-1.6
2,958,805	+		Sama_2453	0.61	-0.9
2,958,805	+		Sama_2453	0.61	-2.3
2,958,865	+		Sama_2453	0.63	-0.6
2,958,866	-		Sama_2453	0.63	+0.3
2,958,912	+		Sama_2453	0.65	-1.1
2,958,912	+		Sama_2453	0.65	+1.2
2,958,912	+		Sama_2453	0.65	-0.8
2,958,912	+		Sama_2453	0.65	+1.2
2,958,912	+		Sama_2453	0.65	-0.5
2,958,912	+		Sama_2453	0.65	+0.2
2,958,912	+		Sama_2453	0.65	+0.2
2,958,912	+		Sama_2453	0.65	+0.2
2,958,913	-		Sama_2453	0.65	-0.9
2,958,913	-		Sama_2453	0.65	+1.1
2,958,913	-		Sama_2453	0.65	-0.8
2,958,913	-		Sama_2453	0.65	+6.6
2,958,940	+		Sama_2453	0.66	-2.2
2,958,941	-		Sama_2453	0.66	-1.6
2,959,030	+		Sama_2453	0.70	-0.3
2,959,030	+		Sama_2453	0.70	-1.7
2,959,031	-		Sama_2453	0.70	+1.5
2,959,130	+		Sama_2453	0.74	-0.9
2,959,172	+		Sama_2453	0.75	-1.4
2,959,173	-		Sama_2453	0.75	-2.9
2,959,173	-		Sama_2453	0.75	-1.3
2,959,241	+		Sama_2453	0.78	-1.3
2,959,241	+		Sama_2453	0.78	-0.3
2,959,318	-		Sama_2453	0.81	-0.5
2,959,444	+		Sama_2453	0.86	-0.5
2,959,444	+		Sama_2453	0.86	-1.6
2,959,480	+		Sama_2453	0.87	-1.1
2,959,489	+		Sama_2453	0.88	+0.5
2,959,489	+		Sama_2453	0.88	-2.3
2,959,489	+		Sama_2453	0.88	-0.6
2,959,490	-		Sama_2453	0.88	+0.5
2,959,490	-		Sama_2453	0.88	-1.8
2,959,490	-		Sama_2453	0.88	-0.3
2,959,513	+		Sama_2453	0.89	-1.1
2,959,514	-		Sama_2453	0.89	-1.3
2,959,514	-		Sama_2453	0.89	-1.6
2,959,532	-		Sama_2453	0.90	-1.5
2,959,532	-		Sama_2453	0.90	-0.3
2,959,532	-		Sama_2453	0.90	-1.5
2,959,638	+				+1.2
2,959,683	-				-0.4
2,959,683	-				+0.3
2,959,697	+				+0.5
2,959,697	+				+0.4
2,959,698	-				+1.0
2,959,698	-				+9.5
2,959,723	+				-1.2
2,959,723	+				+0.2
2,959,723	+				+0.6
2,959,723	+				-1.5
2,959,724	-				-0.3
2,959,724	-				+0.6
2,959,724	-				+0.4
2,959,724	-				-0.3
2,959,724	-				+0.3
2,959,888	-				-0.9
2,960,042	+				+2.1
2,960,043	-				-0.3
2,960,124	+		Sama_2454	0.13	+1.8
2,960,125	-		Sama_2454	0.13	+0.2
2,960,125	-		Sama_2454	0.13	+0.0
2,960,125	-		Sama_2454	0.13	+0.9
2,960,156	+		Sama_2454	0.14	+0.2
2,960,157	-		Sama_2454	0.14	-2.1
2,960,157	-		Sama_2454	0.14	+0.2
2,960,172	-		Sama_2454	0.15	+1.2
2,960,183	+		Sama_2454	0.15	+2.1
2,960,183	+		Sama_2454	0.15	+0.5
2,960,184	-		Sama_2454	0.15	+0.7
2,960,197	-		Sama_2454	0.16	-2.2
2,960,198	+		Sama_2454	0.16	-1.7
2,960,198	+		Sama_2454	0.16	-0.5
2,960,198	+		Sama_2454	0.16	-0.8
2,960,198	+		Sama_2454	0.16	-1.8
2,960,198	+		Sama_2454	0.16	+0.3
2,960,198	+		Sama_2454	0.16	-0.6
2,960,199	-		Sama_2454	0.16	+0.7
2,960,199	-		Sama_2454	0.16	+1.7
2,960,199	-		Sama_2454	0.16	+0.0
2,960,199	-		Sama_2454	0.16	+1.7
2,960,220	+		Sama_2454	0.17	+0.3
2,960,221	-		Sama_2454	0.17	-0.3
2,960,486	-		Sama_2454	0.29	-0.2
2,960,490	+		Sama_2454	0.29	-0.6
2,960,490	+		Sama_2454	0.29	-1.2
2,960,491	-		Sama_2454	0.29	-0.3
2,960,629	+		Sama_2454	0.35	+1.2
2,960,629	+		Sama_2454	0.35	-2.0
2,960,630	-		Sama_2454	0.35	+0.6
2,960,632	+		Sama_2454	0.35	-1.1
2,960,632	+		Sama_2454	0.35	-0.7
2,960,632	+		Sama_2454	0.35	-0.8
2,960,632	+		Sama_2454	0.35	-1.0
2,960,632	+		Sama_2454	0.35	-0.3
2,960,633	-		Sama_2454	0.35	-0.1
2,960,633	-		Sama_2454	0.35	-0.9
2,960,633	-		Sama_2454	0.35	-1.1
2,960,633	-		Sama_2454	0.35	-0.6
2,960,634	+		Sama_2454	0.35	+0.8
2,960,639	-		Sama_2454	0.36	-2.1
2,960,737	+		Sama_2454	0.40	+0.8
2,960,737	+		Sama_2454	0.40	+0.5
2,960,747	+		Sama_2454	0.41	-0.8
2,960,747	+		Sama_2454	0.41	-1.0
2,960,747	+		Sama_2454	0.41	-1.1
2,960,748	-		Sama_2454	0.41	-0.2
2,960,748	-		Sama_2454	0.41	+1.5
2,960,748	-		Sama_2454	0.41	+0.9
2,960,757	+		Sama_2454	0.41	-0.5