Strain Fitness in Shewanella amazonensis SB2B around Sama_2449

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,948,814	-		Sama_2448	0.72	-1.5
2,948,814	-		Sama_2448	0.72	-0.6
2,948,815	+		Sama_2448	0.72	+2.1
2,948,815	+		Sama_2448	0.72	+0.8
2,948,815	+		Sama_2448	0.72	+0.4
2,948,815	+		Sama_2448	0.72	-0.3
2,948,815	+		Sama_2448	0.72	-0.9
2,948,815	+		Sama_2448	0.72	-1.5
2,948,815	+		Sama_2448	0.72	-0.2
2,948,815	+		Sama_2448	0.72	+0.2
2,948,816	-		Sama_2448	0.72	-1.5
2,948,816	-		Sama_2448	0.72	-0.9
2,948,816	-		Sama_2448	0.72	+2.2
2,948,816	-		Sama_2448	0.72	-0.2
2,948,816	-		Sama_2448	0.72	+0.5
2,948,816	-		Sama_2448	0.72	+1.6
2,948,816	-		Sama_2448	0.72	+0.2
2,948,816	-		Sama_2448	0.72	-3.0
2,948,816	-		Sama_2448	0.72	-0.8
2,948,816	-		Sama_2448	0.72	-1.6
2,948,816	-		Sama_2448	0.72	-1.1
2,948,816	-		Sama_2448	0.72	-1.0
2,948,816	-		Sama_2448	0.72	-1.8
2,948,820	+		Sama_2448	0.72	-1.7
2,948,820	+		Sama_2448	0.72	-0.9
2,948,820	+		Sama_2448	0.72	-1.3
2,948,820	+		Sama_2448	0.72	-1.5
2,948,820	+		Sama_2448	0.72	-0.8
2,948,820	+		Sama_2448	0.72	+0.5
2,948,820	+		Sama_2448	0.72	-0.8
2,948,821	-		Sama_2448	0.72	-1.9
2,948,821	-		Sama_2448	0.72	-1.1
2,948,821	-		Sama_2448	0.72	-0.2
2,948,821	-		Sama_2448	0.72	+0.0
2,948,821	-		Sama_2448	0.72	+2.1
2,948,821	-		Sama_2448	0.72	-0.9
2,948,821	-		Sama_2448	0.72	-1.2
2,948,839	+		Sama_2448	0.73	+1.8
2,948,839	+		Sama_2448	0.73	-0.3
2,948,839	+		Sama_2448	0.73	-1.8
2,948,840	-		Sama_2448	0.73	+1.2
2,948,840	-		Sama_2448	0.73	-1.5
2,948,840	-		Sama_2448	0.73	-1.3
2,948,840	-		Sama_2448	0.73	+0.6
2,948,850	-		Sama_2448	0.73	+0.5
2,948,860	+		Sama_2448	0.73	-2.2
2,948,861	-		Sama_2448	0.73	-0.8
2,948,861	-		Sama_2448	0.73	+0.2
2,948,868	+		Sama_2448	0.74	-1.3
2,948,868	+		Sama_2448	0.74	-1.9
2,948,868	+		Sama_2448	0.74	-1.3
2,948,868	+		Sama_2448	0.74	-1.1
2,948,869	-		Sama_2448	0.74	-1.0
2,948,869	-		Sama_2448	0.74	+1.2
2,948,869	-		Sama_2448	0.74	-1.0
2,948,869	-		Sama_2448	0.74	-0.1
2,948,915	+		Sama_2448	0.75	+0.8
2,948,915	+		Sama_2448	0.75	-0.3
2,948,916	-		Sama_2448	0.75	+0.2
2,948,971	+		Sama_2448	0.77	-1.4
2,948,971	+		Sama_2448	0.77	-1.3
2,948,972	-		Sama_2448	0.77	-0.9
2,948,972	-		Sama_2448	0.77	+1.5
2,948,972	-		Sama_2448	0.77	+1.7
2,948,975	+		Sama_2448	0.77	-1.1
2,948,975	+		Sama_2448	0.77	-1.3
2,948,975	+		Sama_2448	0.77	+0.3
2,948,975	+		Sama_2448	0.77	-2.2
2,948,975	+		Sama_2448	0.77	-0.9
2,948,975	+		Sama_2448	0.77	+0.2
2,948,975	+		Sama_2448	0.77	+0.2
2,948,975	+		Sama_2448	0.77	-1.4
2,948,976	-		Sama_2448	0.77	-0.4
2,948,976	-		Sama_2448	0.77	-0.3
2,948,976	-		Sama_2448	0.77	+0.8
2,948,976	-		Sama_2448	0.77	+0.4
2,948,976	-		Sama_2448	0.77	-1.2
2,948,976	-		Sama_2448	0.77	-1.1
2,948,976	-		Sama_2448	0.77	-2.1
2,948,976	-		Sama_2448	0.77	-1.0
2,948,976	-		Sama_2448	0.77	-0.5
2,948,976	-		Sama_2448	0.77	+0.8
2,948,976	-		Sama_2448	0.77	-1.2
2,948,976	-		Sama_2448	0.77	+0.2
2,948,976	-		Sama_2448	0.77	+1.1
2,949,005	+		Sama_2448	0.78	+0.8
2,949,005	+		Sama_2448	0.78	-0.9
2,949,005	+		Sama_2448	0.78	-1.5
2,949,005	+		Sama_2448	0.78	+0.0
2,949,006	-		Sama_2448	0.78	-0.5
2,949,093	+		Sama_2448	0.81	+0.2
2,949,166	-		Sama_2448	0.83	-2.3
2,949,182	+		Sama_2448	0.84	-0.2
2,949,182	+		Sama_2448	0.84	-2.1
2,949,182	+		Sama_2448	0.84	-1.6
2,949,182	+		Sama_2448	0.84	-2.1
2,949,182	+		Sama_2448	0.84	-1.5
2,949,182	+		Sama_2448	0.84	-1.4
2,949,183	-		Sama_2448	0.84	-0.8
2,949,183	-		Sama_2448	0.84	-0.5
2,949,183	-		Sama_2448	0.84	+0.2
2,949,183	-		Sama_2448	0.84	+0.2
2,949,183	-		Sama_2448	0.84	+1.8
2,949,183	-		Sama_2448	0.84	-1.3
2,949,183	-		Sama_2448	0.84	-1.4
2,949,183	-		Sama_2448	0.84	-0.6
2,949,186	+		Sama_2448	0.84	+0.0
2,949,186	+		Sama_2448	0.84	-1.7
2,949,186	+		Sama_2448	0.84	+0.4
2,949,186	+		Sama_2448	0.84	+0.5
2,949,187	-		Sama_2448	0.84	-0.1
2,949,187	-		Sama_2448	0.84	-0.6
2,949,224	+		Sama_2448	0.85	-0.8
2,949,224	+		Sama_2448	0.85	+0.5
2,949,224	+		Sama_2448	0.85	-1.2
2,949,225	-		Sama_2448	0.85	-1.4
2,949,225	-		Sama_2448	0.85	-0.0
2,949,225	-		Sama_2448	0.85	-0.9
2,949,225	-		Sama_2448	0.85	-1.5
2,949,255	-		Sama_2448	0.86	-0.6
2,949,291	+		Sama_2448	0.87	-0.8
2,949,291	+		Sama_2448	0.87	-2.7
2,949,291	+		Sama_2448	0.87	+1.2
2,949,291	+		Sama_2448	0.87	-1.4
2,949,291	+		Sama_2448	0.87	+1.1
2,949,292	-		Sama_2448	0.87	-1.6
2,949,292	-		Sama_2448	0.87	-1.2
2,949,292	-		Sama_2448	0.87	-0.3
2,949,292	-		Sama_2448	0.87	-1.8
2,949,292	-		Sama_2448	0.87	-1.2
2,949,297	+		Sama_2448	0.87	-1.5
2,949,298	-		Sama_2448	0.87	+8.1
2,949,298	-		Sama_2448	0.87	+0.9
2,949,298	-		Sama_2448	0.87	+1.8
2,949,393	-				+0.8
2,949,403	+				+0.3
2,949,403	+				+0.1
2,949,404	-				+0.5
2,949,404	-				+0.6
2,949,404	-				+0.0
2,949,404	-				-2.0
2,949,493	+				-1.4
2,949,493	+				+0.8
2,949,493	+				-0.5
2,949,493	+				+2.2
2,949,493	+				-1.5
2,949,494	-				-1.0
2,949,494	-				+0.5
2,949,494	-				+0.1
2,949,494	-				-0.2
2,949,620	-				+1.8
2,949,625	+				-0.9
2,949,625	+				-1.6
2,949,639	+				-0.8
2,949,697	+				+0.8
2,949,697	+				+1.8
2,949,698	-				-0.1
2,949,698	-				+1.2
2,949,715	+				+0.2
2,949,745	+				-2.3
2,949,745	+				-1.7
2,949,746	-				+0.8
2,949,756	+				-0.2
2,949,756	+				+0.1
2,949,768	+				-0.3
2,949,769	-				+0.5
2,949,782	+				+0.5
2,949,782	+				-0.9
2,949,782	+				-0.6
2,949,783	-				+1.5
2,949,798	+				-1.8
2,949,798	+				-0.2
2,949,798	+				+0.5
2,949,799	-				+0.0
2,949,799	-				-0.6
2,949,799	-				-1.5
2,949,799	-				+1.7
2,949,799	-				-1.0
2,949,799	-				-1.2
2,949,809	+				+0.1
2,949,834	+				-1.2
2,949,834	+				-0.2
2,949,835	-				-0.4
2,949,835	-				+0.5
2,949,835	-				-0.5
2,949,860	-				+0.0
2,949,927	+				-0.6
2,949,927	+				-0.5
2,949,928	-				+2.2
2,949,928	-				-0.5
2,949,937	+				+0.0
2,949,937	+				-2.5
2,949,938	-				-1.0
2,949,938	-				+0.2
2,950,180	+		Sama_2449	0.24	-2.5
2,950,181	-		Sama_2449	0.24	+0.0
2,950,286	+		Sama_2449	0.30	-0.2
2,950,286	+		Sama_2449	0.30	-1.4
2,950,287	-		Sama_2449	0.30	+0.8
2,950,287	-		Sama_2449	0.30	+0.7
2,950,287	-		Sama_2449	0.30	+0.2
2,950,438	+		Sama_2449	0.40	-0.6
2,950,508	+		Sama_2449	0.44	-0.6
2,950,508	+		Sama_2449	0.44	+0.0
2,950,508	+		Sama_2449	0.44	-1.1
2,950,509	-		Sama_2449	0.44	-1.6
2,950,509	-		Sama_2449	0.44	-0.7
2,950,530	+		Sama_2449	0.46	-0.0
2,950,531	-		Sama_2449	0.46	+0.3
2,950,583	-		Sama_2449	0.49	+0.8
2,950,656	+		Sama_2449	0.53	+1.1
2,950,656	+		Sama_2449	0.53	-0.5
2,950,657	-		Sama_2449	0.53	-0.3
2,950,743	-		Sama_2449	0.59	-1.6
2,950,743	-		Sama_2449	0.59	+0.5
2,950,743	-		Sama_2449	0.59	-1.7
2,950,743	-		Sama_2449	0.59	+0.5
2,950,755	+		Sama_2449	0.59	-2.3
2,950,774	-		Sama_2449	0.61	+0.8
2,950,834	+		Sama_2449	0.64	+0.1
2,950,841	-		Sama_2449	0.65	-0.3
2,950,864	+		Sama_2449	0.66	+0.7
2,950,864	+		Sama_2449	0.66	-1.6
2,950,864	+		Sama_2449	0.66	-1.1
2,950,865	-		Sama_2449	0.66	-2.2
2,950,865	-		Sama_2449	0.66	+0.7
2,950,865	-		Sama_2449	0.66	-0.7
2,950,888	+		Sama_2449	0.68	+0.2
2,951,049	+		Sama_2449	0.78	-1.0
2,951,049	+		Sama_2449	0.78	-1.0
2,951,049	+		Sama_2449	0.78	+0.5
2,951,049	+		Sama_2449	0.78	-1.3
2,951,049	+		Sama_2449	0.78	+0.5
2,951,049	+		Sama_2449	0.78	+1.2
2,951,050	-		Sama_2449	0.78	+0.2
2,951,050	-		Sama_2449	0.78	-0.2
2,951,050	-		Sama_2449	0.78	+0.0
2,951,050	-		Sama_2449	0.78	-0.3
2,951,094	+		Sama_2449	0.80	+0.2
2,951,095	-		Sama_2449	0.80	+0.9
2,951,102	+		Sama_2449	0.81	+0.5
2,951,141	+		Sama_2449	0.83	-2.3
2,951,141	+		Sama_2449	0.83	-0.5
2,951,141	+		Sama_2449	0.83	-0.6
2,951,142	-		Sama_2449	0.83	+1.5
2,951,142	-		Sama_2449	0.83	-0.9
2,951,142	-		Sama_2449	0.83	+1.1
2,951,142	-		Sama_2449	0.83	+0.4
2,951,142	-		Sama_2449	0.83	-0.3
2,951,142	-		Sama_2449	0.83	-1.8
2,951,153	-		Sama_2449	0.84	-1.7
2,951,153	-		Sama_2449	0.84	-0.2
2,951,153	-		Sama_2449	0.84	+0.5
2,951,229	+		Sama_2449	0.89	-0.9
2,951,270	-				-1.3
2,951,357	+				-1.3
2,951,358	-				-0.8
2,951,358	-				-0.5
2,951,425	-				-1.3
2,951,425	-				-2.8
2,951,528	+				+0.9
2,951,528	+				+0.8
2,951,528	+				-1.0
2,951,529	-				+2.2
2,951,529	-				+0.2
2,951,529	-				-0.9
2,951,529	-				-0.2
2,951,529	-				-1.0
2,951,531	+				-0.6
2,951,532	-				+2.4
2,951,532	-				+0.8
2,951,532	-				+0.7
2,951,532	-				-0.2
2,951,532	-				-0.6
2,951,532	-				-1.1
2,951,532	-				+0.0
2,951,590	+		Sama_2450	0.13	-1.2
2,951,590	+		Sama_2450	0.13	+1.2
2,951,590	+		Sama_2450	0.13	-0.8
2,951,590	+		Sama_2450	0.13	+0.2
2,951,590	+		Sama_2450	0.13	-1.3
2,951,591	-		Sama_2450	0.13	+1.2
2,951,591	-		Sama_2450	0.13	+0.5
2,951,641	-		Sama_2450	0.17	+0.5
2,951,669	+		Sama_2450	0.19	-1.8
2,951,670	-		Sama_2450	0.19	-1.1
2,951,670	-		Sama_2450	0.19	+0.0
2,951,702	-		Sama_2450	0.22	+0.1
2,951,702	-		Sama_2450	0.22	+1.8
2,951,790	+		Sama_2450	0.29	-0.8
2,951,791	-		Sama_2450	0.29	-0.3
2,951,872	+		Sama_2450	0.35	-1.3
2,951,872	+		Sama_2450	0.35	+0.8
2,951,872	+		Sama_2450	0.35	-1.4
2,951,882	-		Sama_2450	0.36	-0.2
2,951,898	+		Sama_2450	0.37	-1.2
2,951,899	-		Sama_2450	0.38	+0.4
2,951,899	-		Sama_2450	0.38	-1.6
2,951,899	-		Sama_2450	0.38	-1.2
2,951,934	+		Sama_2450	0.40	-1.2
2,951,935	-		Sama_2450	0.40	+0.2
2,951,935	-		Sama_2450	0.40	+0.5
2,952,057	+		Sama_2450	0.50	+2.2
2,952,057	+		Sama_2450	0.50	-1.3
2,952,057	+		Sama_2450	0.50	-0.3
2,952,057	+		Sama_2450	0.50	+1.2
2,952,057	+		Sama_2450	0.50	-0.2
2,952,057	+		Sama_2450	0.50	+0.9
2,952,057	+		Sama_2450	0.50	+2.8
2,952,057	+		Sama_2450	0.50	+0.7
2,952,057	+		Sama_2450	0.50	+0.8
2,952,057	+		Sama_2450	0.50	+1.8
2,952,058	-		Sama_2450	0.50	-0.8
2,952,058	-		Sama_2450	0.50	-1.4
2,952,058	-		Sama_2450	0.50	-0.3
2,952,058	-		Sama_2450	0.50	+2.0
2,952,058	-		Sama_2450	0.50	-0.8
2,952,221	-		Sama_2450	0.63	+1.2
2,952,261	+		Sama_2450	0.66	-0.2
2,952,262	-		Sama_2450	0.66	+0.6
2,952,262	-		Sama_2450	0.66	-1.3
2,952,303	+		Sama_2450	0.69	+0.2
2,952,303	+		Sama_2450	0.69	-2.8
2,952,303	+		Sama_2450	0.69	-0.6
2,952,303	+		Sama_2450	0.69	-1.6
2,952,303	+		Sama_2450	0.69	+0.8
2,952,303	+		Sama_2450	0.69	+1.2
2,952,304	-		Sama_2450	0.69	+0.2
2,952,304	-		Sama_2450	0.69	+1.5
2,952,304	-		Sama_2450	0.69	-1.3
2,952,304	-		Sama_2450	0.69	+1.5
2,952,304	-		Sama_2450	0.69	-0.5
2,952,326	-		Sama_2450	0.71	-1.6
2,952,329	-		Sama_2450	0.71	-0.3
2,952,329	-		Sama_2450	0.71	+0.8
2,952,329	-		Sama_2450	0.71	-0.3
2,952,329	-		Sama_2450	0.71	-2.2
2,952,329	-		Sama_2450	0.71	-0.4
2,952,329	-		Sama_2450	0.71	+0.4