Strain Fitness in Shewanella amazonensis SB2B around Sama_2432

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,925,905	-		Sama_2431	0.81	+0.5
2,926,243	-				+0.8
2,926,243	-				+2.3
2,926,243	-				-0.7
2,926,244	+				-0.2
2,926,244	+				-0.6
2,926,245	-				-1.3
2,926,313	+				-0.5
2,926,313	+				-1.2
2,926,314	-				+0.6
2,926,314	-				-0.6
2,926,341	+				-0.3
2,926,376	+				-0.7
2,926,377	-				+0.4
2,926,377	-				+0.5
2,926,418	-				-1.0
2,926,421	+				-1.7
2,926,422	-				+0.4
2,926,422	-				-1.0
2,926,422	-				-1.8
2,926,422	-				-0.1
2,926,443	+				+0.8
2,926,443	+				+2.8
2,926,444	-				+0.3
2,926,444	-				-0.4
2,926,444	-				-0.3
2,926,444	-				+0.1
2,926,541	+	motB	Sama_2432	0.13	-0.9
2,926,596	+	motB	Sama_2432	0.19	-1.7
2,926,655	-	motB	Sama_2432	0.25	-0.4
2,926,655	-	motB	Sama_2432	0.25	-1.3
2,926,701	-	motB	Sama_2432	0.30	-0.9
2,926,701	-	motB	Sama_2432	0.30	-1.7
2,926,723	-	motB	Sama_2432	0.33	-2.0
2,926,723	-	motB	Sama_2432	0.33	-2.2
2,926,723	-	motB	Sama_2432	0.33	-0.2
2,926,814	+	motB	Sama_2432	0.42	-0.3
2,926,814	+	motB	Sama_2432	0.42	+0.5
2,926,815	-	motB	Sama_2432	0.42	-0.5
2,926,908	-	motB	Sama_2432	0.52	+1.6
2,926,908	-	motB	Sama_2432	0.52	-1.0
2,926,908	-	motB	Sama_2432	0.52	-0.5
2,926,908	-	motB	Sama_2432	0.52	-2.5
2,926,908	-	motB	Sama_2432	0.52	-1.7
2,927,156	+	motB	Sama_2432	0.79	+0.8
2,927,174	+	motB	Sama_2432	0.81	+0.0
2,927,174	+	motB	Sama_2432	0.81	-0.7
2,927,175	-	motB	Sama_2432	0.81	+0.8
2,927,175	-	motB	Sama_2432	0.81	-1.1
2,927,175	-	motB	Sama_2432	0.81	+0.5
2,927,175	-	motB	Sama_2432	0.81	+0.0
2,927,194	+	motB	Sama_2432	0.83	+1.3
2,927,195	-	motB	Sama_2432	0.83	-1.0
2,927,195	-	motB	Sama_2432	0.83	+0.3
2,927,195	-	motB	Sama_2432	0.83	-1.3
2,927,202	-	motB	Sama_2432	0.84	-0.5
2,927,202	-	motB	Sama_2432	0.84	+0.0
2,927,202	-	motB	Sama_2432	0.84	-0.2
2,927,354	+				-0.5
2,927,380	+				-0.5
2,927,475	+		Sama_2433	0.15	+0.8
2,927,481	+		Sama_2433	0.16	+0.8
2,927,505	+		Sama_2433	0.19	-0.3
2,927,505	+		Sama_2433	0.19	+0.0
2,927,505	+		Sama_2433	0.19	+0.5
2,927,521	-		Sama_2433	0.21	-0.3
2,927,556	+		Sama_2433	0.26	+0.2
2,927,556	+		Sama_2433	0.26	+2.8
2,927,557	-		Sama_2433	0.26	-1.1
2,927,557	-		Sama_2433	0.26	+0.5
2,927,565	-		Sama_2433	0.27	-0.8
2,927,565	-		Sama_2433	0.27	+0.8
2,927,576	-		Sama_2433	0.28	-0.9
2,927,655	+		Sama_2433	0.39	+0.4
2,927,703	+		Sama_2433	0.45	-1.0
2,927,703	+		Sama_2433	0.45	-1.5
2,927,703	+		Sama_2433	0.45	-1.8
2,927,704	-		Sama_2433	0.45	-0.6
2,927,704	-		Sama_2433	0.45	+0.2
2,927,707	+		Sama_2433	0.45	+1.2
2,927,707	+		Sama_2433	0.45	+0.0
2,927,707	+		Sama_2433	0.45	-0.3
2,927,707	+		Sama_2433	0.45	-1.1
2,927,708	-		Sama_2433	0.45	+0.2
2,927,708	-		Sama_2433	0.45	+0.8
2,927,708	-		Sama_2433	0.45	+0.2
2,927,708	-		Sama_2433	0.45	+0.2
2,927,708	-		Sama_2433	0.45	-2.3
2,927,708	-		Sama_2433	0.45	-0.3
2,927,708	-		Sama_2433	0.45	-0.8
2,927,708	-		Sama_2433	0.45	-1.9
2,927,743	-		Sama_2433	0.50	+0.8
2,927,814	+		Sama_2433	0.59	-0.6
2,927,929	-		Sama_2433	0.74	-0.3
2,927,929	-		Sama_2433	0.74	-0.5
2,928,013	+		Sama_2433	0.85	-3.6
2,928,014	-		Sama_2433	0.85	+0.4
2,928,019	-		Sama_2433	0.86	+1.2
2,928,137	+				+0.8
2,928,138	-				-0.0
2,928,142	-				+0.5
2,928,209	+				-1.2
2,928,210	-				-0.6
2,928,210	-				-1.8
2,928,210	-				+0.0
2,928,212	+				+1.2
2,928,213	-				+0.2
2,928,224	+				-0.4
2,928,224	+				+1.2
2,928,224	+				-1.4
2,928,225	-				-1.9
2,928,225	-				-1.0
2,928,225	-				-0.2
2,928,226	+				+1.2
2,928,227	-				-1.3
2,928,238	+				-0.6
2,928,238	+				-1.0
2,928,238	+				+0.5
2,928,238	+				-1.3
2,928,238	+				-0.9
2,928,238	+				+1.2
2,928,238	+				-1.0
2,928,239	-				+0.0
2,928,239	-				-2.1
2,928,239	-				-0.6
2,928,239	-				-2.0
2,928,239	-				-0.8
2,928,239	-				+0.0
2,928,239	-				+1.8
2,928,239	-				-0.4
2,928,239	-				-0.0
2,928,239	-				-0.2
2,928,258	+				+0.8
2,928,268	+				+0.2
2,928,269	-				-0.5
2,928,350	+				-0.8
2,928,350	+				-0.1
2,928,351	-				+0.7