Strain Fitness in Shewanella amazonensis SB2B around Sama_2295

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,759,101	+	fliI	Sama_2294	0.24	+0.5
2,759,101	+	fliI	Sama_2294	0.24	+0.8
2,759,101	+	fliI	Sama_2294	0.24	+0.5
2,759,101	+	fliI	Sama_2294	0.24	-0.2
2,759,101	+	fliI	Sama_2294	0.24	+0.1
2,759,101	+	fliI	Sama_2294	0.24	-0.3
2,759,101	+	fliI	Sama_2294	0.24	+0.3
2,759,101	+	fliI	Sama_2294	0.24	+1.8
2,759,102	-	fliI	Sama_2294	0.24	-1.9
2,759,102	-	fliI	Sama_2294	0.24	-0.3
2,759,102	-	fliI	Sama_2294	0.24	-1.0
2,759,170	+	fliI	Sama_2294	0.29	+1.6
2,759,171	-	fliI	Sama_2294	0.29	+0.7
2,759,171	-	fliI	Sama_2294	0.29	-0.5
2,759,171	-	fliI	Sama_2294	0.29	+0.3
2,759,264	+	fliI	Sama_2294	0.36	-0.4
2,759,338	-	fliI	Sama_2294	0.42	-0.6
2,759,338	-	fliI	Sama_2294	0.42	-0.3
2,759,343	+	fliI	Sama_2294	0.42	-0.3
2,759,344	-	fliI	Sama_2294	0.42	+1.6
2,759,344	-	fliI	Sama_2294	0.42	-1.6
2,759,358	+	fliI	Sama_2294	0.43	+0.5
2,759,358	+	fliI	Sama_2294	0.43	-0.8
2,759,358	+	fliI	Sama_2294	0.43	-0.6
2,759,358	+	fliI	Sama_2294	0.43	-0.9
2,759,359	-	fliI	Sama_2294	0.43	-1.3
2,759,359	-	fliI	Sama_2294	0.43	-0.4
2,759,359	-	fliI	Sama_2294	0.43	-0.5
2,759,359	-	fliI	Sama_2294	0.43	-0.9
2,759,378	+	fliI	Sama_2294	0.45	-0.7
2,759,395	-	fliI	Sama_2294	0.46	-1.0
2,759,497	-	fliI	Sama_2294	0.54	-2.2
2,759,592	+	fliI	Sama_2294	0.61	-1.3
2,759,753	-	fliI	Sama_2294	0.73	-0.7
2,759,803	+	fliI	Sama_2294	0.77	-0.6
2,759,804	-	fliI	Sama_2294	0.77	-0.6
2,759,804	-	fliI	Sama_2294	0.77	+0.8
2,759,878	+	fliI	Sama_2294	0.82	-2.2
2,759,879	-	fliI	Sama_2294	0.82	+0.5
2,759,879	-	fliI	Sama_2294	0.82	+0.8
2,759,879	-	fliI	Sama_2294	0.82	-1.3
2,759,879	-	fliI	Sama_2294	0.82	+1.3
2,759,879	-	fliI	Sama_2294	0.82	-1.5
2,759,900	+	fliI	Sama_2294	0.84	-1.7
2,759,901	-	fliI	Sama_2294	0.84	-1.8
2,759,901	-	fliI	Sama_2294	0.84	+0.0
2,759,901	-	fliI	Sama_2294	0.84	+1.3
2,759,937	+	fliI	Sama_2294	0.87	+0.0
2,760,088	-				-1.3
2,760,112	+				-0.2
2,760,113	-				-0.3
2,760,113	-				+0.4
2,760,113	-				-0.5
2,760,197	+	fliH	Sama_2295	0.12	-0.3
2,760,197	+	fliH	Sama_2295	0.12	-0.2
2,760,197	+	fliH	Sama_2295	0.12	-0.3
2,760,198	-	fliH	Sama_2295	0.12	-0.6
2,760,249	-	fliH	Sama_2295	0.18	-0.6
2,760,249	-	fliH	Sama_2295	0.18	-1.6
2,760,278	-	fliH	Sama_2295	0.21	-1.2
2,760,356	-	fliH	Sama_2295	0.30	-2.0
2,760,378	+	fliH	Sama_2295	0.32	-0.2
2,760,378	+	fliH	Sama_2295	0.32	+0.0
2,760,379	-	fliH	Sama_2295	0.32	-0.7
2,760,379	-	fliH	Sama_2295	0.32	-1.8
2,760,480	-	fliH	Sama_2295	0.44	-0.2
2,760,480	-	fliH	Sama_2295	0.44	-1.1
2,760,713	+	fliH	Sama_2295	0.69	-0.6
2,760,714	-	fliH	Sama_2295	0.70	-0.5
2,760,801	-	fliH	Sama_2295	0.79	-2.0
2,760,801	-	fliH	Sama_2295	0.79	-0.9
2,760,959	+				-2.4
2,761,155	+	fliG	Sama_2296	0.16	+1.3
2,761,283	-	fliG	Sama_2296	0.28	-0.7
2,761,373	+	fliG	Sama_2296	0.37	+1.8
2,761,374	-	fliG	Sama_2296	0.37	-1.8
2,761,374	-	fliG	Sama_2296	0.37	+0.1
2,761,490	-	fliG	Sama_2296	0.48	-0.2
2,761,490	-	fliG	Sama_2296	0.48	-1.0
2,761,490	-	fliG	Sama_2296	0.48	+1.1
2,761,584	-	fliG	Sama_2296	0.57	+0.3
2,761,915	-	fliG	Sama_2296	0.89	+1.3