Strain Fitness in Shewanella amazonensis SB2B around Sama_2268

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,733,625	+		Sama_2267	0.18	+0.7
2,733,626	-		Sama_2267	0.18	+0.2
2,733,648	+		Sama_2267	0.20	-0.2
2,733,649	-		Sama_2267	0.20	+0.5
2,733,662	+		Sama_2267	0.21	+0.5
2,733,663	-		Sama_2267	0.21	-0.9
2,733,711	+		Sama_2267	0.25	-0.3
2,733,728	+		Sama_2267	0.27	+0.7
2,733,728	+		Sama_2267	0.27	-0.5
2,733,728	+		Sama_2267	0.27	+0.4
2,733,729	-		Sama_2267	0.27	+0.5
2,733,764	-		Sama_2267	0.30	-0.8
2,733,782	+		Sama_2267	0.32	+0.2
2,733,796	-		Sama_2267	0.33	-1.4
2,733,796	-		Sama_2267	0.33	-0.5
2,733,817	-		Sama_2267	0.35	+2.6
2,733,817	-		Sama_2267	0.35	-0.9
2,733,847	-		Sama_2267	0.38	+0.8
2,733,853	-		Sama_2267	0.38	+2.5
2,733,921	-		Sama_2267	0.44	-1.2
2,733,921	-		Sama_2267	0.44	+0.7
2,733,928	+		Sama_2267	0.45	+1.2
2,733,929	-		Sama_2267	0.45	+0.8
2,733,960	+		Sama_2267	0.48	+1.8
2,733,987	+		Sama_2267	0.50	+0.2
2,733,998	+		Sama_2267	0.51	-0.3
2,733,998	+		Sama_2267	0.51	-0.2
2,734,020	-		Sama_2267	0.53	+0.5
2,734,132	-		Sama_2267	0.64	+0.7
2,734,138	+		Sama_2267	0.64	-0.5
2,734,138	+		Sama_2267	0.64	+0.2
2,734,195	-		Sama_2267	0.69	-0.5
2,734,199	+		Sama_2267	0.70	+0.5
2,734,199	+		Sama_2267	0.70	+0.4
2,734,199	+		Sama_2267	0.70	+0.0
2,734,199	+		Sama_2267	0.70	+1.2
2,734,200	-		Sama_2267	0.70	+1.0
2,734,200	-		Sama_2267	0.70	-1.4
2,734,200	-		Sama_2267	0.70	+0.4
2,734,200	-		Sama_2267	0.70	+0.5
2,734,200	-		Sama_2267	0.70	-0.2
2,734,201	+		Sama_2267	0.70	+2.2
2,734,202	-		Sama_2267	0.70	-0.3
2,734,226	+		Sama_2267	0.72	+0.2
2,734,226	+		Sama_2267	0.72	+1.2
2,734,276	-		Sama_2267	0.77	+1.4
2,734,319	+		Sama_2267	0.81	-0.2
2,734,336	-		Sama_2267	0.82	+0.2
2,734,379	-		Sama_2267	0.86	+0.6
2,734,379	-		Sama_2267	0.86	-0.3
2,734,516	+				+0.1
2,734,516	+				-1.0
2,734,517	-				+0.1
2,734,517	-				+1.2
2,734,517	-				-2.8
2,734,517	-				+0.5
2,734,517	-				+0.2
2,734,533	+				+1.2
2,734,533	+				-0.3
2,734,533	+				+0.7
2,734,534	-				-0.5
2,734,534	-				-0.2
2,734,534	-				+0.4
2,734,535	+				-0.8
2,734,535	+				-2.0
2,734,536	-				-1.3
2,734,536	-				-0.0
2,734,536	-				-1.8
2,734,536	-				+0.6
2,734,536	-				-0.2
2,734,536	-				-0.4
2,734,536	-				+1.4
2,734,556	-				-0.9
2,734,609	+				-1.3
2,734,610	-				-1.1
2,734,620	+				+0.5
2,734,621	-				-1.0
2,734,621	-				-1.9
2,734,622	+				-1.4
2,734,623	-				-0.3
2,734,623	-				-1.2
2,734,623	-				-1.6
2,734,660	+				-0.2
2,734,673	+				+1.2
2,734,674	-				-1.4
2,734,696	+		Sama_2268	0.11	+0.5
2,734,697	-		Sama_2268	0.11	+2.2
2,734,697	-		Sama_2268	0.11	-0.6
2,734,700	+		Sama_2268	0.12	+0.2
2,734,701	-		Sama_2268	0.12	-1.3
2,734,842	-		Sama_2268	0.29	+0.5
2,734,842	-		Sama_2268	0.29	-0.9
2,734,844	-		Sama_2268	0.29	-0.2
2,734,884	-		Sama_2268	0.34	+0.2
2,734,884	-		Sama_2268	0.34	-0.5
2,734,884	-		Sama_2268	0.34	+1.2
2,734,911	-		Sama_2268	0.37	-0.6
2,734,932	-		Sama_2268	0.40	-0.2
2,734,932	-		Sama_2268	0.40	-0.2
2,734,932	-		Sama_2268	0.40	-1.8
2,735,015	-		Sama_2268	0.50	-1.1
2,735,125	-		Sama_2268	0.63	-1.0
2,735,125	-		Sama_2268	0.63	+0.5
2,735,157	-		Sama_2268	0.67	-0.5
2,735,166	-		Sama_2268	0.68	+0.2
2,735,187	-		Sama_2268	0.70	+0.2
2,735,187	-		Sama_2268	0.70	-0.5
2,735,190	+		Sama_2268	0.71	+1.2
2,735,190	+		Sama_2268	0.71	+0.8
2,735,191	-		Sama_2268	0.71	-1.3
2,735,191	-		Sama_2268	0.71	-0.5
2,735,191	-		Sama_2268	0.71	-0.2
2,735,191	-		Sama_2268	0.71	-0.3
2,735,191	-		Sama_2268	0.71	-0.3
2,735,192	+		Sama_2268	0.71	+0.0
2,735,193	-		Sama_2268	0.71	+0.8
2,735,193	-		Sama_2268	0.71	-0.3
2,735,193	-		Sama_2268	0.71	+1.2
2,735,210	+		Sama_2268	0.73	+0.0
2,735,211	-		Sama_2268	0.73	+0.5
2,735,211	-		Sama_2268	0.73	-1.4
2,735,211	-		Sama_2268	0.73	+0.0
2,735,211	-		Sama_2268	0.73	+0.2
2,735,215	-		Sama_2268	0.74	-0.8
2,735,215	-		Sama_2268	0.74	+0.5
2,735,215	-		Sama_2268	0.74	-0.9
2,735,267	+		Sama_2268	0.80	-0.2
2,735,279	-		Sama_2268	0.81	+1.8
2,735,279	-		Sama_2268	0.81	-0.2
2,735,378	-				-0.3
2,735,380	-				-1.3
2,735,427	-				+0.0
2,735,434	-				-2.2
2,735,467	+				+1.8
2,735,489	-				-1.6
2,735,510	+				+2.5
2,735,510	+				-1.0
2,735,520	+				-1.0
2,735,520	+				-1.3
2,735,521	-				+1.2
2,735,521	-				+0.3
2,735,533	+				+2.0
2,735,533	+				+0.7
2,735,534	-				-0.0
2,735,534	-				+0.4
2,735,536	-				-0.8
2,735,555	+				+1.1
2,735,555	+				+0.5
2,735,556	-				-1.0
2,735,556	-				+0.7
2,735,556	-				+0.3
2,735,556	-				+2.2
2,735,566	+				+0.0
2,735,578	+				+0.5
2,735,579	-				-0.4
2,735,579	-				-0.8
2,735,598	+				-1.2
2,735,598	+				-1.1
2,735,598	+				+1.5
2,735,599	-				-0.6
2,735,599	-				+0.8
2,735,599	-				+2.4
2,735,599	-				-0.1
2,735,599	-				-1.6
2,735,599	-				-0.5
2,735,599	-				+0.5
2,735,602	+				-0.2
2,735,602	+				+0.4
2,735,603	-				+3.3
2,735,603	-				+1.6
2,735,603	-				+0.4
2,735,603	-				+1.8
2,735,654	+				+0.7
2,735,684	+				-1.2
2,735,689	-				-0.9
2,735,689	-				-0.6
2,735,782	+				+0.8
2,735,782	+				+0.2
2,735,783	-				+1.2
2,735,789	+				-1.5
2,735,789	+				+0.3
2,735,789	+				-1.7
2,735,790	-				+0.2
2,735,790	-				+1.2
2,735,790	-				+0.7
2,735,790	-				+0.4
2,735,969	-		Sama_2269	0.17	+0.3
2,736,008	+		Sama_2269	0.19	-0.3
2,736,009	-		Sama_2269	0.19	+0.7
2,736,009	-		Sama_2269	0.19	-0.3
2,736,029	+		Sama_2269	0.20	+1.8
2,736,030	-		Sama_2269	0.20	+0.5
2,736,030	-		Sama_2269	0.20	+0.5
2,736,030	-		Sama_2269	0.20	+0.2
2,736,030	-		Sama_2269	0.20	-0.2
2,736,030	-		Sama_2269	0.20	+0.5
2,736,030	-		Sama_2269	0.20	-0.2
2,736,031	+		Sama_2269	0.20	-0.8
2,736,031	+		Sama_2269	0.20	+1.3
2,736,032	-		Sama_2269	0.20	-0.2
2,736,032	-		Sama_2269	0.20	-0.6
2,736,032	-		Sama_2269	0.20	+2.1
2,736,126	+		Sama_2269	0.25	-1.2
2,736,127	-		Sama_2269	0.25	-0.5
2,736,143	-		Sama_2269	0.26	-0.4
2,736,161	-		Sama_2269	0.27	+0.9
2,736,161	-		Sama_2269	0.27	-0.8
2,736,164	-		Sama_2269	0.27	+0.1
2,736,164	-		Sama_2269	0.27	-0.1
2,736,164	-		Sama_2269	0.27	-0.6
2,736,228	+		Sama_2269	0.31	-2.1
2,736,228	+		Sama_2269	0.31	+1.0
2,736,232	-		Sama_2269	0.31	-0.9
2,736,385	+		Sama_2269	0.39	+0.5
2,736,385	+		Sama_2269	0.39	+3.1
2,736,416	-		Sama_2269	0.41	+0.5