Strain Fitness in Shewanella amazonensis SB2B around Sama_2226

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,688,921	+				-1.6
2,688,922	-				-0.5
2,688,922	-				+1.6
2,688,922	-				+0.2
2,688,927	-				-1.3
2,689,034	+		Sama_2225	0.26	+1.6
2,689,164	+		Sama_2225	0.52	+1.2
2,689,164	+		Sama_2225	0.52	+0.8
2,689,164	+		Sama_2225	0.52	-2.1
2,689,165	-		Sama_2225	0.52	+0.8
2,689,311	-		Sama_2225	0.81	+0.2
2,689,379	+				+1.5
2,689,380	-				-1.6
2,689,402	+				-0.7
2,689,432	+				+1.2
2,689,501	-				-0.7
2,689,501	-				-0.8
2,689,541	+				+0.6
2,689,549	+				+0.2
2,689,631	+				+0.0
2,689,671	+				+1.0
2,689,681	+				-1.6
2,689,682	-				+1.5
2,689,682	-				+0.3
2,689,682	-				-0.5
2,689,685	-				+0.5
2,689,713	+				+1.2
2,689,713	+				+2.1
2,689,713	+				+0.3
2,689,714	-				-0.5
2,689,761	+				-1.7
2,689,761	+				-0.2
2,689,761	+				-0.7
2,689,761	+				-1.6
2,689,761	+				+2.4
2,689,761	+				-1.0
2,689,761	+				+0.1
2,689,761	+				-0.4
2,689,761	+				+0.3
2,689,761	+				-0.1
2,689,762	-				-0.5
2,689,762	-				+1.6
2,689,762	-				-0.1
2,689,901	+		Sama_2226	0.33	-2.6
2,689,902	-		Sama_2226	0.34	-1.0
2,689,902	-		Sama_2226	0.34	+0.5
2,689,977	+		Sama_2226	0.52	+1.2
2,689,977	+		Sama_2226	0.52	-0.5
2,690,034	+		Sama_2226	0.65	+0.3
2,690,034	+		Sama_2226	0.65	-0.7
2,690,073	+		Sama_2226	0.75	-1.0
2,690,074	-		Sama_2226	0.75	-1.2
2,690,074	-		Sama_2226	0.75	+0.8
2,690,074	-		Sama_2226	0.75	-1.5
2,690,075	+		Sama_2226	0.75	-0.4
2,690,075	+		Sama_2226	0.75	+0.3
2,690,154	-				-0.0
2,690,193	+				-2.4
2,690,222	+				+0.5
2,690,345	+				+0.5
2,690,345	+				-0.1
2,690,345	+				+0.3
2,690,345	+				-1.7
2,690,346	-				+0.3
2,690,349	+				+0.8
2,690,350	-				+0.3
2,690,350	-				+0.7
2,690,534	-		Sama_2227	0.16	+1.2
2,690,534	-		Sama_2227	0.16	-0.4
2,690,555	+		Sama_2227	0.18	+1.8
2,690,555	+		Sama_2227	0.18	-0.6
2,690,632	+		Sama_2227	0.26	+0.5
2,690,632	+		Sama_2227	0.26	+0.3
2,690,633	-		Sama_2227	0.26	-0.9
2,690,633	-		Sama_2227	0.26	-1.9
2,690,633	-		Sama_2227	0.26	-0.2
2,690,633	-		Sama_2227	0.26	-0.8
2,690,635	+		Sama_2227	0.26	+0.6
2,690,635	+		Sama_2227	0.26	-1.1
2,690,636	-		Sama_2227	0.26	-0.5
2,690,656	+		Sama_2227	0.28	-0.1
2,690,657	-		Sama_2227	0.28	-0.8
2,690,657	-		Sama_2227	0.28	+0.2
2,690,657	-		Sama_2227	0.28	+1.5
2,690,721	+		Sama_2227	0.35	-0.7
2,690,781	+		Sama_2227	0.41	+1.8
2,690,782	-		Sama_2227	0.41	-1.1
2,690,782	-		Sama_2227	0.41	+0.5
2,690,782	-		Sama_2227	0.41	-1.5
2,690,815	-		Sama_2227	0.44	+0.8
2,690,863	+		Sama_2227	0.49	-0.2
2,690,876	+		Sama_2227	0.50	+1.5
2,690,876	+		Sama_2227	0.50	-0.0
2,690,932	+		Sama_2227	0.56	+1.2
2,690,933	-		Sama_2227	0.56	+0.1
2,690,933	-		Sama_2227	0.56	-0.2
2,690,942	+		Sama_2227	0.57	-0.3
2,690,942	+		Sama_2227	0.57	+1.8
2,690,942	+		Sama_2227	0.57	-1.6
2,690,942	+		Sama_2227	0.57	-0.7
2,690,944	+		Sama_2227	0.57	+0.5
2,690,944	+		Sama_2227	0.57	-1.3
2,690,945	-		Sama_2227	0.57	+0.2
2,690,945	-		Sama_2227	0.57	+0.3
2,690,951	-		Sama_2227	0.58	-2.0
2,690,951	-		Sama_2227	0.58	+0.6
2,690,951	-		Sama_2227	0.58	-0.7
2,690,996	+		Sama_2227	0.62	-0.9
2,690,996	+		Sama_2227	0.62	-1.9
2,691,014	-		Sama_2227	0.64	+1.0
2,691,055	+		Sama_2227	0.68	+0.8
2,691,056	-		Sama_2227	0.68	-0.2
2,691,157	-		Sama_2227	0.78	-2.0
2,691,157	-		Sama_2227	0.78	-0.2