Strain Fitness in Shewanella amazonensis SB2B around Sama_2184

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,641,266	-		Sama_2182	0.77	+0.2
2,641,267	+		Sama_2182	0.77	-0.0
2,641,267	+		Sama_2182	0.77	-0.2
2,641,267	+		Sama_2182	0.77	-1.5
2,641,267	+		Sama_2182	0.77	-1.4
2,641,267	+		Sama_2182	0.77	+0.6
2,641,267	+		Sama_2182	0.77	-0.9
2,641,268	-		Sama_2182	0.78	+1.8
2,641,271	+		Sama_2182	0.78	-0.2
2,641,272	-		Sama_2182	0.78	-0.9
2,641,272	-		Sama_2182	0.78	-0.4
2,641,272	-		Sama_2182	0.78	+0.7
2,641,282	+		Sama_2182	0.78	+0.9
2,641,282	+		Sama_2182	0.78	-0.6
2,641,283	-		Sama_2182	0.78	+1.8
2,641,417	-		Sama_2182	0.82	-1.1
2,641,428	+		Sama_2182	0.82	-0.7
2,641,428	+		Sama_2182	0.82	+0.4
2,641,429	-		Sama_2182	0.83	+0.8
2,641,429	-		Sama_2182	0.83	+1.3
2,641,429	-		Sama_2182	0.83	-0.7
2,641,429	-		Sama_2182	0.83	-1.5
2,641,494	+		Sama_2182	0.85	+1.0
2,641,494	+		Sama_2182	0.85	+0.8
2,641,494	+		Sama_2182	0.85	+0.2
2,641,494	+		Sama_2182	0.85	+0.0
2,641,495	-		Sama_2182	0.85	+1.4
2,641,495	-		Sama_2182	0.85	-0.7
2,641,524	+		Sama_2182	0.85	+0.1
2,641,524	+		Sama_2182	0.85	+1.3
2,641,524	+		Sama_2182	0.85	-0.8
2,641,525	-		Sama_2182	0.86	+0.4
2,641,525	-		Sama_2182	0.86	-0.6
2,641,531	+		Sama_2182	0.86	-0.7
2,641,549	-		Sama_2182	0.86	-1.1
2,641,578	+		Sama_2182	0.87	-0.0
2,641,578	+		Sama_2182	0.87	-0.4
2,641,595	+		Sama_2182	0.88	-1.5
2,641,595	+		Sama_2182	0.88	+0.2
2,641,595	+		Sama_2182	0.88	-1.0
2,641,681	+				-0.9
2,641,681	+				-0.2
2,641,681	+				+0.6
2,641,681	+				-0.9
2,641,681	+				+1.2
2,641,706	+				-0.0
2,641,706	+				-1.6
2,641,707	-				+0.4
2,641,707	-				+2.0
2,641,740	-				+1.2
2,641,740	-				-0.9
2,641,954	-				-1.4
2,641,954	-				-1.0
2,641,956	+				-0.8
2,641,965	-				+1.2
2,641,990	-				+0.8
2,642,000	-				+0.1
2,642,000	-				-0.1
2,642,016	+				-1.8
2,642,016	+				+0.2
2,642,017	-				+1.2
2,642,017	-				-0.7
2,642,034	+				+0.2
2,642,034	+				-1.1
2,642,034	+				+1.0
2,642,034	+				+2.5
2,642,034	+				-0.5
2,642,034	+				+2.8
2,642,034	+				+0.4
2,642,034	+				-0.6
2,642,035	-				+0.2
2,642,035	-				-0.8
2,642,035	-				-0.6
2,642,035	-				-0.0
2,642,035	-				-0.7
2,642,035	-				+0.3
2,642,035	-				-0.2
2,642,035	-				+0.1
2,642,037	+				-2.2
2,642,056	-		Sama_2183	0.18	-0.0
2,642,056	-		Sama_2183	0.18	+1.4
2,642,217	+				-0.6
2,642,223	-				+0.4
2,642,230	+				-1.1
2,642,230	+				-1.3
2,642,230	+				+0.7
2,642,236	+				-0.2
2,642,236	+				-1.2
2,642,236	+				+1.2
2,642,236	+				+0.1
2,642,236	+				-0.5
2,642,236	+				-1.9
2,642,237	-				+0.4
2,642,237	-				+0.0
2,642,279	+				+0.1
2,642,318	-		Sama_2184	0.14	+0.8
2,642,404	+		Sama_2184	0.36	-0.0
2,642,404	+		Sama_2184	0.36	+0.2
2,642,404	+		Sama_2184	0.36	+0.5
2,642,405	-		Sama_2184	0.36	-2.5
2,642,405	-		Sama_2184	0.36	-0.0
2,642,405	-		Sama_2184	0.36	-0.8
2,642,408	+		Sama_2184	0.37	-0.4
2,642,435	+		Sama_2184	0.44	-1.1
2,642,453	+		Sama_2184	0.48	-1.5
2,642,454	-		Sama_2184	0.48	-1.1
2,642,460	+		Sama_2184	0.50	-1.6
2,642,461	-		Sama_2184	0.50	+0.3
2,642,461	-		Sama_2184	0.50	+0.6
2,642,523	+		Sama_2184	0.66	-0.9
2,642,524	-		Sama_2184	0.66	-0.2
2,642,551	+		Sama_2184	0.73	-1.5
2,642,551	+		Sama_2184	0.73	-0.6
2,642,607	+		Sama_2184	0.88	-0.0
2,642,695	+				-0.5
2,642,844	+				+0.4
2,642,990	+				-0.3
2,642,991	-				+0.8
2,643,188	+				-0.2
2,643,188	+				-0.6
2,643,226	+				-1.6
2,643,272	+				-0.7
2,643,321	+				+1.6
2,643,325	+				-0.6
2,643,325	+				-2.1
2,643,325	+				-1.3
2,643,325	+				-0.5
2,643,326	-				-0.7
2,643,326	-				-0.2
2,643,329	+				+1.3
2,643,330	-				+1.0
2,643,360	+				-1.0
2,643,394	-				+0.2
2,643,394	-				-1.2
2,643,394	-				+0.8