Strain Fitness in Shewanella amazonensis SB2B around Sama_2151

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,596,634	-				-0.1
2,596,634	-				+0.4
2,596,671	+				+2.1
2,596,672	-				-1.5
2,596,672	-				+0.5
2,596,675	+				+2.9
2,596,903	+	truA	Sama_2150	0.24	+7.4
2,596,903	+	truA	Sama_2150	0.24	+7.5
2,596,904	-	truA	Sama_2150	0.24	+6.7
2,596,920	+	truA	Sama_2150	0.26	+4.8
2,596,920	+	truA	Sama_2150	0.26	+5.9
2,596,920	+	truA	Sama_2150	0.26	+6.4
2,596,920	+	truA	Sama_2150	0.26	+7.8
2,596,921	-	truA	Sama_2150	0.26	+6.6
2,596,921	-	truA	Sama_2150	0.26	+4.7
2,596,960	-	truA	Sama_2150	0.31	+6.8
2,596,960	-	truA	Sama_2150	0.31	+5.6
2,596,960	-	truA	Sama_2150	0.31	+3.8
2,596,960	-	truA	Sama_2150	0.31	+5.3
2,596,961	+	truA	Sama_2150	0.31	+6.1
2,596,961	+	truA	Sama_2150	0.31	+7.5
2,596,961	+	truA	Sama_2150	0.31	+7.5
2,596,961	+	truA	Sama_2150	0.31	+7.0
2,596,961	+	truA	Sama_2150	0.31	+8.3
2,596,961	+	truA	Sama_2150	0.31	+8.0
2,596,961	+	truA	Sama_2150	0.31	+4.3
2,596,961	+	truA	Sama_2150	0.31	+2.5
2,596,961	+	truA	Sama_2150	0.31	+7.0
2,596,961	+	truA	Sama_2150	0.31	+3.0
2,596,961	+	truA	Sama_2150	0.31	+7.7
2,596,962	-	truA	Sama_2150	0.32	+4.1
2,596,962	-	truA	Sama_2150	0.32	+6.5
2,596,962	-	truA	Sama_2150	0.32	+1.1
2,596,962	-	truA	Sama_2150	0.32	+6.3
2,596,962	-	truA	Sama_2150	0.32	+5.6
2,596,962	-	truA	Sama_2150	0.32	+6.2
2,596,962	-	truA	Sama_2150	0.32	+3.8
2,596,962	-	truA	Sama_2150	0.32	+6.4
2,596,962	-	truA	Sama_2150	0.32	+7.1
2,596,989	+	truA	Sama_2150	0.35	+7.6
2,596,990	-	truA	Sama_2150	0.35	+5.6
2,596,990	-	truA	Sama_2150	0.35	+6.1
2,596,990	-	truA	Sama_2150	0.35	+4.0
2,596,990	-	truA	Sama_2150	0.35	+6.3
2,596,990	-	truA	Sama_2150	0.35	+5.2
2,596,990	-	truA	Sama_2150	0.35	+5.2
2,596,990	-	truA	Sama_2150	0.35	+5.3
2,596,990	-	truA	Sama_2150	0.35	+6.2
2,596,993	+	truA	Sama_2150	0.35	+7.8
2,596,994	-	truA	Sama_2150	0.36	+2.5
2,596,994	-	truA	Sama_2150	0.36	+4.4
2,596,994	-	truA	Sama_2150	0.36	+5.8
2,597,010	+	truA	Sama_2150	0.38	+7.3
2,597,060	-	truA	Sama_2150	0.44	+5.5
2,597,060	-	truA	Sama_2150	0.44	+3.8
2,597,060	-	truA	Sama_2150	0.44	+1.7
2,597,111	+	truA	Sama_2150	0.51	+5.8
2,597,163	+	truA	Sama_2150	0.57	+9.7
2,597,164	-	truA	Sama_2150	0.57	+4.3
2,597,307	+	truA	Sama_2150	0.75	+8.4
2,597,339	-	truA	Sama_2150	0.80	+6.6
2,597,503	+				+8.1
2,597,504	-				+3.6
2,597,541	+				+3.7
2,597,542	-				-0.7
2,597,544	+				+4.0
2,597,545	-				-0.1
2,597,545	-				+1.4
2,597,599	-				-0.1
2,597,620	-				-0.7
2,597,620	-				+1.1
2,597,620	-				-2.0
2,597,620	-				+1.1
2,597,624	+				-0.4
2,597,624	+				+0.4
2,597,625	-				-0.5
2,597,730	+				-1.5
2,597,730	+				+0.9
2,597,731	-				-0.7
2,597,731	-				-1.2
2,597,825	+				+0.7
2,597,825	+				+1.6
2,597,825	+				+0.1
2,597,826	-				+0.6
2,597,826	-				-0.6
2,597,828	-				-1.1
2,597,828	-				-1.3
2,597,834	-				-1.2
2,597,899	+				+0.7
2,597,900	-		Sama_2151	0.10	-1.3
2,597,924	-		Sama_2151	0.11	+1.1
2,597,939	+		Sama_2151	0.11	+0.2
2,597,940	-		Sama_2151	0.11	+0.7
2,597,940	-		Sama_2151	0.11	+0.9
2,598,140	-		Sama_2151	0.19	+1.7
2,598,157	+		Sama_2151	0.19	-1.3
2,598,157	+		Sama_2151	0.19	-1.1
2,598,158	-		Sama_2151	0.19	-0.5
2,598,158	-		Sama_2151	0.19	-0.5
2,598,158	-		Sama_2151	0.19	+0.7
2,598,158	-		Sama_2151	0.19	-2.0
2,598,187	+		Sama_2151	0.20	-1.6
2,598,187	+		Sama_2151	0.20	-1.0
2,598,188	-		Sama_2151	0.20	+0.1
2,598,188	-		Sama_2151	0.20	+0.4
2,598,296	-		Sama_2151	0.24	+0.4
2,598,296	-		Sama_2151	0.24	+0.4
2,598,383	-		Sama_2151	0.27	-0.2
2,598,458	-		Sama_2151	0.30	+1.1
2,598,458	-		Sama_2151	0.30	+0.1
2,598,458	-		Sama_2151	0.30	+0.7
2,598,458	-		Sama_2151	0.30	-1.2
2,598,458	-		Sama_2151	0.30	-1.7
2,598,458	-		Sama_2151	0.30	+0.4
2,598,460	+		Sama_2151	0.30	+0.9
2,598,461	-		Sama_2151	0.30	-0.5
2,598,461	-		Sama_2151	0.30	+0.7
2,598,989	-		Sama_2151	0.49	+0.7
2,598,989	-		Sama_2151	0.49	+0.1
2,599,065	-		Sama_2151	0.51	+0.4
2,599,111	+		Sama_2151	0.53	+2.7
2,599,111	+		Sama_2151	0.53	+0.4
2,599,112	-		Sama_2151	0.53	-0.3
2,599,359	-		Sama_2151	0.62	-0.1
2,599,580	+		Sama_2151	0.70	+0.4
2,599,594	+		Sama_2151	0.70	+0.1
2,599,594	+		Sama_2151	0.70	-0.3
2,599,594	+		Sama_2151	0.70	-0.3
2,599,595	-		Sama_2151	0.70	-0.6
2,599,595	-		Sama_2151	0.70	+0.1
2,599,595	-		Sama_2151	0.70	-1.1
2,599,595	-		Sama_2151	0.70	-1.2
2,599,625	-		Sama_2151	0.71	+0.5
2,599,630	+		Sama_2151	0.71	-1.2
2,599,631	-		Sama_2151	0.72	-0.0
2,599,631	-		Sama_2151	0.72	-1.9
2,599,631	-		Sama_2151	0.72	-2.0
2,599,631	-		Sama_2151	0.72	+1.7
2,599,631	-		Sama_2151	0.72	-1.7
2,599,631	-		Sama_2151	0.72	+1.4
2,599,631	-		Sama_2151	0.72	+2.9
2,599,717	+		Sama_2151	0.75	+0.7
2,599,838	+		Sama_2151	0.79	-0.5
2,599,866	-		Sama_2151	0.80	+0.1
2,599,866	-		Sama_2151	0.80	-0.6
2,599,866	-		Sama_2151	0.80	-0.5
2,599,866	-		Sama_2151	0.80	-0.0
2,599,866	-		Sama_2151	0.80	-0.4
2,599,866	-		Sama_2151	0.80	+1.1
2,599,910	+		Sama_2151	0.81	-1.1
2,599,910	+		Sama_2151	0.81	-0.6
2,599,911	-		Sama_2151	0.81	-0.3
2,599,911	-		Sama_2151	0.81	+0.7
2,599,946	-		Sama_2151	0.83	+0.9
2,599,991	-		Sama_2151	0.84	-0.4
2,600,102	+		Sama_2151	0.88	-1.6
2,600,102	+		Sama_2151	0.88	-1.2
2,600,102	+		Sama_2151	0.88	-1.9
2,600,102	+		Sama_2151	0.88	-0.5
2,600,102	+		Sama_2151	0.88	-0.3
2,600,103	-		Sama_2151	0.88	-0.7
2,600,103	-		Sama_2151	0.88	-1.0
2,600,103	-		Sama_2151	0.88	+0.1
2,600,103	-		Sama_2151	0.88	-0.4
2,600,126	+		Sama_2151	0.89	-0.9
2,600,146	+		Sama_2151	0.90	-0.3
2,600,147	-		Sama_2151	0.90	-1.0
2,600,151	+				+2.0
2,600,151	+				-1.7
2,600,151	+				+0.1
2,600,152	-				-0.9
2,600,152	-				+0.4
2,600,152	-				-1.3
2,600,152	-				-0.5
2,600,152	-				-0.9
2,600,187	+				+1.1
2,600,188	-				-1.3
2,600,209	-				+0.5
2,600,273	-				-1.7
2,600,275	+				-0.2
2,600,276	-				+0.1
2,600,276	-				-0.5
2,600,276	-				-0.5
2,600,283	+				-1.1
2,600,283	+				+0.7
2,600,284	-				-1.3
2,600,284	-				+1.7
2,600,412	+				-1.0
2,600,437	-				-0.3
2,600,492	-				-1.4
2,600,508	-				+0.4
2,600,612	-				-0.6