Strain Fitness in Shewanella amazonensis SB2B around Sama_2148
Experiment: Fusidic 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,593,964 | + | -0.9 | |||
2,593,964 | + | +2.7 | |||
2,593,965 | - | -1.0 | |||
2,593,965 | - | -2.0 | |||
2,593,965 | - | +0.4 | |||
2,593,965 | - | -0.5 | |||
2,593,965 | - | -1.1 | |||
2,593,965 | - | -0.3 | |||
2,593,965 | - | +1.0 | |||
2,593,965 | - | -0.9 | |||
2,593,965 | - | -2.2 | |||
2,593,996 | + | -1.2 | |||
2,594,008 | - | +0.1 | |||
2,594,035 | - | -1.9 | |||
2,594,064 | + | +0.7 | |||
2,594,290 | - | Sama_2147 | 0.47 | -0.5 | |
2,594,306 | - | Sama_2147 | 0.50 | +0.1 | |
2,594,338 | - | Sama_2147 | 0.57 | +1.5 | |
2,594,349 | - | Sama_2147 | 0.59 | -1.1 | |
2,594,349 | - | Sama_2147 | 0.59 | +1.1 | |
2,594,417 | - | Sama_2147 | 0.73 | +0.0 | |
2,594,499 | - | Sama_2147 | 0.90 | -1.3 | |
2,594,534 | - | -0.3 |
Or see this region's nucleotide sequence