Strain Fitness in Shewanella amazonensis SB2B around Sama_2141

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,585,540	-		Sama_2140	0.39	+0.2
2,585,574	+		Sama_2140	0.42	-1.9
2,585,575	-		Sama_2140	0.42	+0.0
2,585,580	+		Sama_2140	0.42	-1.6
2,585,580	+		Sama_2140	0.42	+2.3
2,585,580	+		Sama_2140	0.42	+1.1
2,585,581	-		Sama_2140	0.42	+0.2
2,585,817	+		Sama_2140	0.58	+0.4
2,585,817	+		Sama_2140	0.58	-1.7
2,585,817	+		Sama_2140	0.58	+0.3
2,585,818	-		Sama_2140	0.59	+0.5
2,585,936	+		Sama_2140	0.67	+0.7
2,585,936	+		Sama_2140	0.67	-0.3
2,585,936	+		Sama_2140	0.67	+1.2
2,585,936	+		Sama_2140	0.67	+0.7
2,585,936	+		Sama_2140	0.67	+0.9
2,585,936	+		Sama_2140	0.67	-1.1
2,585,936	+		Sama_2140	0.67	-0.6
2,585,936	+		Sama_2140	0.67	-1.3
2,585,936	+		Sama_2140	0.67	+0.4
2,585,936	+		Sama_2140	0.67	+0.1
2,585,936	+		Sama_2140	0.67	-0.0
2,585,936	+		Sama_2140	0.67	-0.6
2,585,936	+		Sama_2140	0.67	+0.1
2,585,937	-		Sama_2140	0.67	+1.1
2,585,937	-		Sama_2140	0.67	+1.0
2,585,937	-		Sama_2140	0.67	-0.6
2,585,937	-		Sama_2140	0.67	+0.8
2,585,937	-		Sama_2140	0.67	+0.1
2,585,937	-		Sama_2140	0.67	-0.7
2,585,937	-		Sama_2140	0.67	-1.4
2,585,937	-		Sama_2140	0.67	-1.1
2,585,937	-		Sama_2140	0.67	-0.6
2,585,937	-		Sama_2140	0.67	-0.9
2,585,937	-		Sama_2140	0.67	+1.1
2,585,937	-		Sama_2140	0.67	-0.5
2,585,937	-		Sama_2140	0.67	-0.9
2,585,937	-		Sama_2140	0.67	+1.0
2,585,937	-		Sama_2140	0.67	+0.7
2,585,937	-		Sama_2140	0.67	-0.2
2,585,937	-		Sama_2140	0.67	+3.3
2,585,937	-		Sama_2140	0.67	-1.6
2,585,940	+		Sama_2140	0.67	-1.4
2,585,940	+		Sama_2140	0.67	-0.6
2,585,940	+		Sama_2140	0.67	+0.3
2,585,940	+		Sama_2140	0.67	-0.2
2,585,940	+		Sama_2140	0.67	-0.1
2,585,940	+		Sama_2140	0.67	-1.9
2,585,941	-		Sama_2140	0.67	-0.0
2,585,947	+		Sama_2140	0.68	-1.1
2,585,978	+		Sama_2140	0.70	-0.6
2,585,979	-		Sama_2140	0.70	+2.3
2,586,030	+		Sama_2140	0.73	+0.1
2,586,030	+		Sama_2140	0.73	-1.2
2,586,030	+		Sama_2140	0.73	-1.6
2,586,030	+		Sama_2140	0.73	+0.1
2,586,031	-		Sama_2140	0.73	-0.4
2,586,031	-		Sama_2140	0.73	+2.7
2,586,123	+		Sama_2140	0.80	-0.5
2,586,124	-		Sama_2140	0.80	-0.7
2,586,124	-		Sama_2140	0.80	+1.3
2,586,271	+				-0.5
2,586,271	+				-0.1
2,586,271	+				+0.8
2,586,272	-				-0.8
2,586,272	-				-0.1
2,586,272	-				+0.7
2,586,293	+				-0.1
2,586,361	-				-0.3
2,586,454	+				+2.7
2,586,454	+				-1.3
2,586,454	+				-0.3
2,586,454	+				-0.8
2,586,455	-				-0.1
2,586,455	-				-1.5
2,586,455	-				-1.3
2,586,455	-				+0.1
2,586,455	-				-2.1
2,586,458	+				-0.9
2,586,458	+				-0.1
2,586,459	-				+0.1
2,586,459	-				-0.6
2,586,459	-				+1.4
2,586,459	-				-1.4
2,586,459	-				-1.9
2,586,459	-				-1.2
2,586,460	+				-0.8
2,586,460	+				-2.2
2,586,460	+				+3.3
2,586,460	+				+1.7
2,586,460	+				-0.1
2,586,460	+				-1.8
2,586,460	+				+0.7
2,586,461	-				-1.2
2,586,461	-				+0.5
2,586,461	-				-1.2
2,586,461	-				-0.5
2,586,461	-				-1.5
2,586,461	-				+0.6
2,586,461	-				-0.6
2,586,496	-				+1.1
2,586,500	-				+0.4
2,586,559	+				-1.5
2,586,560	-				-0.9
2,586,560	-				+0.4
2,586,595	+		Sama_2141	0.13	+0.4
2,586,631	-		Sama_2141	0.21	+1.4
2,586,651	+		Sama_2141	0.25	-1.5
2,586,651	+		Sama_2141	0.25	-0.6
2,586,652	-		Sama_2141	0.25	-1.3
2,586,652	-		Sama_2141	0.25	-1.2
2,586,652	-		Sama_2141	0.25	-1.6
2,586,652	-		Sama_2141	0.25	-0.9
2,586,652	-		Sama_2141	0.25	+0.7
2,586,710	+		Sama_2141	0.38	-0.7
2,586,711	-		Sama_2141	0.38	-0.1
2,586,728	+		Sama_2141	0.42	-1.1
2,586,728	+		Sama_2141	0.42	+0.9
2,586,729	-		Sama_2141	0.42	-1.1
2,586,742	-		Sama_2141	0.45	-1.1
2,586,742	-		Sama_2141	0.45	+0.9
2,586,800	+		Sama_2141	0.57	-1.0
2,586,949	-		Sama_2141	0.89	-1.4
2,586,999	-				+0.9
2,586,999	-				+1.1
2,586,999	-				-0.1
2,586,999	-				+0.7
2,586,999	-				-0.9
2,587,023	+				-0.2
2,587,023	+				+0.4
2,587,023	+				-1.1
2,587,023	+				-2.3
2,587,024	-				-0.0
2,587,031	+				-2.2
2,587,037	+				-0.6
2,587,038	-				-1.1
2,587,086	+				-0.5
2,587,099	-				-0.6
2,587,100	+				+0.5
2,587,100	+				-0.1
2,587,101	-				-0.5
2,587,175	+				-0.3
2,587,213	+				+1.0
2,587,309	+		Sama_2142	0.12	+0.5
2,587,310	-		Sama_2142	0.13	-0.1
2,587,324	+		Sama_2142	0.15	-1.5
2,587,345	+		Sama_2142	0.18	-2.1
2,587,346	-		Sama_2142	0.18	-0.8
2,587,346	-		Sama_2142	0.18	+4.0
2,587,346	-		Sama_2142	0.18	+1.5
2,587,506	+		Sama_2142	0.43	-0.6
2,587,509	-		Sama_2142	0.43	+0.4
2,587,509	-		Sama_2142	0.43	+0.5
2,587,509	-		Sama_2142	0.43	+2.0
2,587,509	-		Sama_2142	0.43	-1.5
2,587,509	-		Sama_2142	0.43	+0.0
2,587,545	+		Sama_2142	0.49	+0.5
2,587,697	+		Sama_2142	0.73	-1.2
2,587,697	+		Sama_2142	0.73	+1.6
2,587,697	+		Sama_2142	0.73	-1.2
2,587,698	-		Sama_2142	0.73	-0.5
2,587,698	-		Sama_2142	0.73	+0.2
2,587,698	-		Sama_2142	0.73	+0.9
2,587,698	-		Sama_2142	0.73	-1.1
2,587,698	-		Sama_2142	0.73	-2.3
2,587,698	-		Sama_2142	0.73	+2.7
2,587,758	+		Sama_2142	0.82	+0.4
2,587,762	+		Sama_2142	0.83	+0.7
2,587,859	+				-0.5
2,587,860	-				+1.2
2,587,866	+				+0.1
2,587,873	+				-0.9
2,587,892	-				-1.5
2,587,994	-				-1.2