Strain Fitness in Shewanella amazonensis SB2B around Sama_1994

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,424,665	+				+0.9
2,424,665	+				+0.6
2,424,665	+				-1.0
2,424,665	+				+0.5
2,424,666	-				-0.6
2,424,709	+				-2.1
2,424,710	-				-1.6
2,424,711	+				+0.9
2,424,711	+				+0.2
2,424,712	-				+3.6
2,424,712	-				+0.0
2,424,911	+		Sama_1994	0.19	-0.9
2,424,911	+		Sama_1994	0.19	-1.0
2,424,914	+		Sama_1994	0.20	-0.8
2,424,956	-		Sama_1994	0.29	+0.0
2,424,956	-		Sama_1994	0.29	-1.8
2,424,967	+		Sama_1994	0.31	+0.1
2,424,967	+		Sama_1994	0.31	-0.7
2,424,967	+		Sama_1994	0.31	-1.6
2,424,968	-		Sama_1994	0.31	+0.3
2,424,968	-		Sama_1994	0.31	-1.7
2,424,972	+		Sama_1994	0.32	-1.0
2,424,972	+		Sama_1994	0.32	-1.1
2,424,972	+		Sama_1994	0.32	-0.7
2,424,973	-		Sama_1994	0.32	-0.3
2,424,973	-		Sama_1994	0.32	+1.0
2,424,973	-		Sama_1994	0.32	+0.6
2,425,157	+		Sama_1994	0.71	-0.2
2,425,264	+				-1.2
2,425,264	+				+3.2
2,425,265	-				-0.4
2,425,265	-				-0.9
2,425,265	-				+0.4
2,425,265	-				-1.1
2,425,265	-				-1.4
2,425,265	-				-0.7
2,425,265	-				-0.2
2,425,271	-				+0.3
2,425,271	-				-1.2
2,425,271	-				-0.1
2,425,288	-				-1.3
2,425,377	-				+1.0
2,425,394	-				-0.7
2,425,394	-				+0.6
2,425,578	-		Sama_1995	0.30	-1.6
2,425,578	-		Sama_1995	0.30	-0.4
2,425,578	-		Sama_1995	0.30	+0.4
2,425,578	-		Sama_1995	0.30	+0.6
2,425,612	+		Sama_1995	0.34	-0.7
2,425,672	+		Sama_1995	0.41	-1.1
2,425,673	-		Sama_1995	0.41	+0.6
2,425,673	-		Sama_1995	0.41	+1.0
2,425,673	-		Sama_1995	0.41	+0.2
2,425,676	-		Sama_1995	0.41	-0.8
2,425,676	-		Sama_1995	0.41	-1.3
2,425,676	-		Sama_1995	0.41	+0.9
2,425,815	+		Sama_1995	0.58	-0.6
2,425,815	+		Sama_1995	0.58	+1.6
2,425,816	-		Sama_1995	0.58	+0.3
2,425,816	-		Sama_1995	0.58	-2.4
2,425,829	-		Sama_1995	0.59	-0.2
2,425,857	+		Sama_1995	0.63	-0.4
2,425,858	-		Sama_1995	0.63	-0.4
2,425,858	-		Sama_1995	0.63	+0.0
2,425,941	-		Sama_1995	0.72	-0.7
2,425,962	+		Sama_1995	0.75	+0.1
2,425,962	+		Sama_1995	0.75	+0.4
2,425,963	-		Sama_1995	0.75	-0.2
2,425,963	-		Sama_1995	0.75	+0.0
2,425,963	-		Sama_1995	0.75	+0.4
2,426,032	-		Sama_1995	0.83	+0.3
2,426,032	-		Sama_1995	0.83	+1.3
2,426,039	-		Sama_1995	0.84	+1.3
2,426,165	+				+0.2
2,426,165	+				+1.0
2,426,165	+				+1.0
2,426,165	+				+0.3
2,426,166	-				-2.0
2,426,166	-				-1.1
2,426,166	-				+0.4
2,426,166	-				-1.1
2,426,166	-				-1.7
2,426,196	+				+0.8
2,426,223	+				+1.4
2,426,251	-				+2.0
2,426,251	-				+1.2
2,426,251	-				-1.1
2,426,251	-				-1.1
2,426,253	+				-0.6
2,426,258	+				+1.0
2,426,259	-				-2.6
2,426,267	+				-0.6