Strain Fitness in Shewanella amazonensis SB2B around Sama_1897

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,313,518	-				+0.2
2,313,529	+				-0.5
2,313,529	+				-0.1
2,313,529	+				+0.9
2,313,530	-				+1.5
2,313,535	+				+1.5
2,313,536	-				-1.7
2,313,542	+				+0.9
2,313,562	+				-0.3
2,313,632	+				-0.1
2,313,633	-				+0.9
2,313,687	+				+0.4
2,313,717	-		Sama_1896	0.10	-1.1
2,313,751	-		Sama_1896	0.15	-0.8
2,313,787	+		Sama_1896	0.19	+0.9
2,313,875	+		Sama_1896	0.30	+0.5
2,313,876	-		Sama_1896	0.30	+0.2
2,313,876	-		Sama_1896	0.30	+0.7
2,313,886	-		Sama_1896	0.32	+1.5
2,313,886	-		Sama_1896	0.32	-0.9
2,314,002	-		Sama_1896	0.46	+0.7
2,314,007	+		Sama_1896	0.47	+0.9
2,314,007	+		Sama_1896	0.47	-0.3
2,314,008	-		Sama_1896	0.47	-0.1
2,314,010	+		Sama_1896	0.47	-1.3
2,314,011	-		Sama_1896	0.48	+0.1
2,314,011	-		Sama_1896	0.48	-0.3
2,314,011	-		Sama_1896	0.48	+1.3
2,314,011	-		Sama_1896	0.48	-1.1
2,314,105	+		Sama_1896	0.59	-0.7
2,314,139	+		Sama_1896	0.64	+0.8
2,314,139	+		Sama_1896	0.64	-1.4
2,314,212	+		Sama_1896	0.73	+1.9
2,314,240	+		Sama_1896	0.77	-1.3
2,314,252	+		Sama_1896	0.78	+0.5
2,314,333	+		Sama_1896	0.88	-0.5
2,314,333	+		Sama_1896	0.88	+0.5
2,314,333	+		Sama_1896	0.88	+0.3
2,314,334	-		Sama_1896	0.88	-1.3
2,314,391	+				-1.0
2,314,391	+				-0.3
2,314,425	+				-1.0
2,314,515	+				+0.7
2,314,713	+		Sama_1897	0.28	+0.3
2,314,727	-		Sama_1897	0.29	-0.3
2,314,747	-		Sama_1897	0.31	+0.2
2,314,747	-		Sama_1897	0.31	-1.0
2,314,870	+		Sama_1897	0.44	-1.0
2,315,000	-		Sama_1897	0.58	-1.7
2,315,022	+		Sama_1897	0.61	-0.1
2,315,023	-		Sama_1897	0.61	-1.4
2,315,023	-		Sama_1897	0.61	-1.6
2,315,103	+		Sama_1897	0.69	-1.6
2,315,138	+		Sama_1897	0.73	-1.0
2,315,139	-		Sama_1897	0.73	+0.9
2,315,139	-		Sama_1897	0.73	+0.5
2,315,139	-		Sama_1897	0.73	+0.9
2,315,139	-		Sama_1897	0.73	-0.7
2,315,142	+		Sama_1897	0.74	+0.9
2,315,142	+		Sama_1897	0.74	-1.3
2,315,142	+		Sama_1897	0.74	-1.3
2,315,142	+		Sama_1897	0.74	-1.4
2,315,399	+				+0.2
2,315,400	-				-2.3
2,315,400	-				+0.2
2,315,530	+		Sama_1898	0.14	-0.7
2,315,549	-		Sama_1898	0.16	-0.6
2,315,610	+		Sama_1898	0.22	+0.2
2,315,610	+		Sama_1898	0.22	-1.2
2,315,611	-		Sama_1898	0.22	+0.9
2,315,611	-		Sama_1898	0.22	-0.1
2,315,615	-		Sama_1898	0.22	-1.0
2,315,615	-		Sama_1898	0.22	-1.5
2,315,615	-		Sama_1898	0.22	-0.1
2,315,615	-		Sama_1898	0.22	-0.8
2,315,654	+		Sama_1898	0.26	-0.7
2,315,671	+		Sama_1898	0.28	+1.3
2,315,671	+		Sama_1898	0.28	+1.2
2,315,672	-		Sama_1898	0.28	-0.4
2,315,672	-		Sama_1898	0.28	+1.5
2,315,672	-		Sama_1898	0.28	+1.3
2,315,764	+		Sama_1898	0.37	-0.8
2,315,764	+		Sama_1898	0.37	+2.5
2,315,765	-		Sama_1898	0.37	-0.5
2,315,765	-		Sama_1898	0.37	-0.7
2,315,765	-		Sama_1898	0.37	-1.0
2,315,765	-		Sama_1898	0.37	+1.8
2,315,765	-		Sama_1898	0.37	-0.2
2,315,778	+		Sama_1898	0.38	-0.5
2,315,778	+		Sama_1898	0.38	-0.7
2,315,779	-		Sama_1898	0.38	-0.3
2,315,779	-		Sama_1898	0.38	-1.3
2,315,828	+		Sama_1898	0.43	+2.5
2,315,828	+		Sama_1898	0.43	+2.5
2,315,828	+		Sama_1898	0.43	-0.1
2,315,829	-		Sama_1898	0.43	-0.1
2,315,829	-		Sama_1898	0.43	-0.9
2,315,831	+		Sama_1898	0.43	+0.5
2,315,832	-		Sama_1898	0.43	-1.8
2,315,832	-		Sama_1898	0.43	-0.1
2,315,949	+		Sama_1898	0.55	+0.2
2,316,017	-		Sama_1898	0.61	-0.8
2,316,026	+		Sama_1898	0.62	-2.3
2,316,034	+		Sama_1898	0.63	-0.4
2,316,034	+		Sama_1898	0.63	+0.9
2,316,035	-		Sama_1898	0.63	-0.7
2,316,035	-		Sama_1898	0.63	-1.0
2,316,035	-		Sama_1898	0.63	-0.7
2,316,035	-		Sama_1898	0.63	-0.8
2,316,035	-		Sama_1898	0.63	+0.6
2,316,197	-		Sama_1898	0.79	+0.5
2,316,212	+		Sama_1898	0.80	+0.5
2,316,333	-				+0.2
2,316,333	-				-0.1