Strain Fitness in Shewanella amazonensis SB2B around Sama_R0078

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,293,587	+				-0.1
2,293,588	-				-0.1
2,293,640	+		Sama_1878	0.12	+1.3
2,293,683	+		Sama_1878	0.17	-1.6
2,293,683	+		Sama_1878	0.17	-1.7
2,293,683	+		Sama_1878	0.17	-0.8
2,293,684	-		Sama_1878	0.17	+0.6
2,293,712	-		Sama_1878	0.20	-1.9
2,293,712	-		Sama_1878	0.20	-0.4
2,293,739	+		Sama_1878	0.23	-1.9
2,293,748	-		Sama_1878	0.25	-2.9
2,293,748	-		Sama_1878	0.25	-0.9
2,293,802	+		Sama_1878	0.31	-0.5
2,293,802	+		Sama_1878	0.31	+1.5
2,293,811	+		Sama_1878	0.32	-0.9
2,293,846	+		Sama_1878	0.36	-1.6
2,293,846	+		Sama_1878	0.36	-1.1
2,293,860	-		Sama_1878	0.38	-0.5
2,293,896	-		Sama_1878	0.42	-0.5
2,293,898	+		Sama_1878	0.42	-0.4
2,293,898	+		Sama_1878	0.42	+0.5
2,293,898	+		Sama_1878	0.42	+0.2
2,293,898	+		Sama_1878	0.42	-0.5
2,293,899	-		Sama_1878	0.42	-1.7
2,293,899	-		Sama_1878	0.42	-0.5
2,293,899	-		Sama_1878	0.42	+0.7
2,293,899	-		Sama_1878	0.42	+2.5
2,293,902	+		Sama_1878	0.43	-1.2
2,293,902	+		Sama_1878	0.43	-1.7
2,293,902	+		Sama_1878	0.43	-1.2
2,293,902	+		Sama_1878	0.43	-1.3
2,293,902	+		Sama_1878	0.43	-0.7
2,293,903	-		Sama_1878	0.43	-2.7
2,293,929	+		Sama_1878	0.46	-1.4
2,293,967	+		Sama_1878	0.51	+0.4
2,293,967	+		Sama_1878	0.51	-1.6
2,293,968	-		Sama_1878	0.51	-1.7
2,293,968	-		Sama_1878	0.51	-1.9
2,294,011	+		Sama_1878	0.56	+0.5
2,294,011	+		Sama_1878	0.56	-0.3
2,294,012	-		Sama_1878	0.56	-1.1
2,294,012	-		Sama_1878	0.56	-1.2
2,294,021	-		Sama_1878	0.57	-1.0
2,294,138	+		Sama_1878	0.71	-1.2
2,294,138	+		Sama_1878	0.71	-1.6
2,294,139	-		Sama_1878	0.71	-1.2
2,294,264	+		Sama_1878	0.86	+0.5
2,294,264	+		Sama_1878	0.86	-2.2
2,294,264	+		Sama_1878	0.86	+0.7
2,294,264	+		Sama_1878	0.86	-1.3
2,294,268	+		Sama_1878	0.86	+2.5
2,294,270	+		Sama_1878	0.87	-1.2
2,294,283	+		Sama_1878	0.88	-1.2
2,294,303	+				-1.7
2,294,303	+				-2.4
2,294,303	+				+0.5
2,294,303	+				-1.5
2,294,303	+				-1.5
2,294,303	+				-0.8
2,294,342	+				-0.2
2,294,342	+				-0.5
2,294,402	+				-1.2
2,294,402	+				-0.3
2,294,503	-				+1.5
2,294,503	-				-0.1
2,294,507	-				-0.1
2,294,507	-				-0.2
2,294,507	-				-0.3
2,294,659	-				-1.1
2,294,659	-				-0.3
2,294,661	-				-0.2
2,294,661	-				+0.5
2,294,865	-		Sama_1879	0.11	-1.1
2,294,970	-		Sama_1879	0.19	-1.1
2,294,970	-		Sama_1879	0.19	-0.3
2,295,008	-		Sama_1879	0.22	+1.8
2,295,008	-		Sama_1879	0.22	-0.7
2,295,090	+		Sama_1879	0.28	+1.3
2,295,091	-		Sama_1879	0.28	+0.0
2,295,094	+		Sama_1879	0.28	-0.8
2,295,250	+		Sama_1879	0.40	-1.1
2,295,251	-		Sama_1879	0.40	-0.7
2,295,256	-		Sama_1879	0.41	+2.5
2,295,286	+		Sama_1879	0.43	+1.5
2,295,286	+		Sama_1879	0.43	+2.5
2,295,378	+		Sama_1879	0.50	-1.1
2,295,463	+		Sama_1879	0.56	-0.7
2,295,464	-		Sama_1879	0.56	-0.5
2,295,465	+		Sama_1879	0.56	-1.0
2,295,466	-		Sama_1879	0.57	-1.8
2,295,553	-		Sama_1879	0.63	+0.5
2,295,553	-		Sama_1879	0.63	-0.1