Strain Fitness in Shewanella amazonensis SB2B around Sama_1806

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,197,339	+		Sama_1805	0.62	+0.5
2,197,339	+		Sama_1805	0.62	+0.4
2,197,340	-		Sama_1805	0.62	+2.0
2,197,340	-		Sama_1805	0.62	+0.8
2,197,340	-		Sama_1805	0.62	+1.9
2,197,340	-		Sama_1805	0.62	+0.2
2,197,343	-		Sama_1805	0.62	-0.3
2,197,343	-		Sama_1805	0.62	+0.5
2,197,349	-		Sama_1805	0.63	-0.5
2,197,565	+		Sama_1805	0.81	+0.2
2,197,566	-		Sama_1805	0.81	+0.4
2,197,566	-		Sama_1805	0.81	+1.1
2,197,567	+		Sama_1805	0.81	+0.5
2,197,567	+		Sama_1805	0.81	+1.8
2,197,568	-		Sama_1805	0.81	-0.2
2,197,568	-		Sama_1805	0.81	+2.1
2,197,594	+		Sama_1805	0.84	-0.4
2,197,654	-		Sama_1805	0.89	+0.2
2,197,680	-				+2.5
2,197,680	-				-0.2
2,197,682	-				-0.5
2,197,682	-				+0.5
2,197,707	-				-0.1
2,197,786	-				-1.3
2,197,786	-				+1.7
2,197,786	-				-0.1
2,197,798	-				+2.0
2,197,834	-				+2.0
2,197,834	-				-0.6
2,197,854	-				+0.2
2,197,868	+				+1.9
2,197,939	-				+0.2
2,197,939	-				-0.9
2,197,970	-				-0.1
2,198,101	-		Sama_R0069	0.43	+0.7
2,198,101	-		Sama_R0069	0.43	-1.3
2,198,101	-		Sama_R0069	0.43	-0.1
2,198,101	-		Sama_R0069	0.43	+1.5
2,198,103	-		Sama_R0069	0.46	+2.5
2,198,185	+				+0.9
2,198,186	-				+0.2
2,198,194	-				-1.2
2,198,791	-		Sama_1806	0.34	+2.4
2,199,084	+		Sama_1806	0.54	+1.5
2,199,772	-				+2.2
2,199,792	-				+1.8
2,199,859	+				+2.7
2,199,961	-				+0.3
2,199,967	+				-1.6
2,199,968	-				-0.0
2,199,968	-				-0.5
2,200,156	+		Sama_1807	0.22	-0.6
2,200,224	+		Sama_1807	0.30	+0.8
2,200,264	-		Sama_1807	0.35	-0.4
2,200,276	+		Sama_1807	0.36	-0.5
2,200,278	+		Sama_1807	0.36	+0.2
2,200,278	+		Sama_1807	0.36	+1.4
2,200,278	+		Sama_1807	0.36	+0.1
2,200,278	+		Sama_1807	0.36	-0.5
2,200,279	-		Sama_1807	0.36	-0.6
2,200,279	-		Sama_1807	0.36	-1.8
2,200,279	-		Sama_1807	0.36	+0.5
2,200,279	-		Sama_1807	0.36	+1.2
2,200,334	+		Sama_1807	0.43	-0.1
2,200,335	-		Sama_1807	0.43	+1.7
2,200,346	+		Sama_1807	0.44	-1.2
2,200,347	-		Sama_1807	0.44	-0.3
2,200,435	-		Sama_1807	0.54	+0.9
2,200,454	+		Sama_1807	0.57	+0.5
2,200,455	-		Sama_1807	0.57	+1.5
2,200,490	+		Sama_1807	0.61	-0.1
2,200,491	-		Sama_1807	0.61	-0.6
2,200,542	+		Sama_1807	0.67	-1.1
2,200,542	+		Sama_1807	0.67	-1.6
2,200,543	-		Sama_1807	0.67	-0.1
2,200,543	-		Sama_1807	0.67	-0.8
2,200,593	-		Sama_1807	0.73	-0.5
2,200,598	+		Sama_1807	0.73	-0.6
2,200,615	-		Sama_1807	0.75	-0.7
2,200,615	-		Sama_1807	0.75	-0.9
2,200,637	-		Sama_1807	0.78	-1.2