Strain Fitness in Shewanella amazonensis SB2B around Sama_1803

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,193,543	-		Sama_1801	0.65	-0.8
2,193,543	-		Sama_1801	0.65	-0.3
2,193,605	+		Sama_1801	0.72	+0.5
2,193,605	+		Sama_1801	0.72	-0.4
2,193,606	-		Sama_1801	0.72	+0.4
2,193,606	-		Sama_1801	0.72	+0.2
2,193,635	+		Sama_1801	0.75	+0.2
2,193,636	-		Sama_1801	0.75	+0.5
2,193,751	+		Sama_1801	0.87	-1.7
2,193,751	+		Sama_1801	0.87	+0.5
2,193,751	+		Sama_1801	0.87	-0.5
2,193,751	+		Sama_1801	0.87	-0.1
2,193,806	+				-0.6
2,193,876	+				-0.2
2,193,987	-				-1.3
2,193,987	-				+1.7
2,193,987	-				+0.5
2,193,987	-				-0.5
2,194,002	-				-0.6
2,194,016	-				-0.3
2,194,016	-				-1.8
2,194,038	+				-0.6
2,194,039	-				+0.2
2,194,039	-				+1.8
2,194,105	-		Sama_1802	0.20	-2.1
2,194,176	-		Sama_1802	0.32	+0.4
2,194,176	-		Sama_1802	0.32	+1.5
2,194,228	-		Sama_1802	0.41	-1.1
2,194,325	-		Sama_1802	0.57	+0.1
2,194,330	-		Sama_1802	0.58	-0.8
2,194,330	-		Sama_1802	0.58	+0.9
2,194,351	+		Sama_1802	0.61	+0.5
2,194,351	+		Sama_1802	0.61	+0.7
2,194,352	-		Sama_1802	0.61	-0.9
2,194,442	-		Sama_1802	0.77	-0.3
2,194,476	+		Sama_1802	0.82	-0.9
2,194,477	-		Sama_1802	0.82	-0.3
2,194,539	-				-0.3
2,194,539	-				+0.8
2,194,643	-		Sama_1803	0.14	-0.6
2,194,678	-		Sama_1803	0.18	-0.5
2,194,714	-		Sama_1803	0.22	-0.5
2,194,740	-		Sama_1803	0.25	-0.2
2,194,799	-		Sama_1803	0.32	-1.3
2,194,808	-		Sama_1803	0.33	+0.2
2,194,814	-		Sama_1803	0.33	+1.2
2,194,816	-		Sama_1803	0.34	-0.6
2,194,843	+		Sama_1803	0.37	-1.5
2,194,844	-		Sama_1803	0.37	-2.1
2,194,844	-		Sama_1803	0.37	-0.1
2,195,013	-		Sama_1803	0.56	+0.2
2,195,013	-		Sama_1803	0.56	+1.5
2,195,014	+		Sama_1803	0.56	-0.3
2,195,015	-		Sama_1803	0.56	-0.1
2,195,028	-		Sama_1803	0.58	-1.1
2,195,121	-		Sama_1803	0.68	-0.2
2,195,144	+		Sama_1803	0.71	-0.3
2,195,175	-		Sama_1803	0.75	+1.5
2,195,228	+		Sama_1803	0.81	-0.5
2,195,325	-				+0.4
2,195,325	-				+1.7
2,195,493	+				+0.5
2,195,493	+				-0.7
2,195,494	-				-1.3
2,195,495	+				-0.8
2,195,532	-				-0.1
2,195,532	-				-0.3
2,195,532	-				-0.6
2,195,533	+				+0.4
2,195,565	+				-0.3
2,195,565	+				+0.2
2,195,623	+				+0.9
2,195,623	+				+0.5
2,195,993	+		Sama_1804	0.41	-2.3
2,195,993	+		Sama_1804	0.41	-0.9
2,195,999	+		Sama_1804	0.42	-0.1
2,196,020	+		Sama_1804	0.44	-0.1
2,196,020	+		Sama_1804	0.44	-1.3
2,196,053	+		Sama_1804	0.48	+1.2
2,196,316	+		Sama_1804	0.77	+0.4
2,196,316	+		Sama_1804	0.77	-0.5
2,196,352	+		Sama_1804	0.81	+0.4
2,196,352	+		Sama_1804	0.81	-1.1
2,196,359	+		Sama_1804	0.82	-0.5