Strain Fitness in Shewanella amazonensis SB2B around Sama_1784

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,174,846	-				+0.2
2,174,960	+		Sama_1783	0.17	-0.3
2,174,995	-		Sama_1783	0.21	+1.3
2,174,995	-		Sama_1783	0.21	+0.2
2,175,081	-		Sama_1783	0.31	-0.0
2,175,135	+		Sama_1783	0.37	-1.0
2,175,141	-		Sama_1783	0.38	+1.0
2,175,141	-		Sama_1783	0.38	-0.6
2,175,141	-		Sama_1783	0.38	-1.2
2,175,234	+		Sama_1783	0.48	-1.4
2,175,319	-		Sama_1783	0.57	-0.4
2,175,331	-		Sama_1783	0.59	+0.2
2,175,385	-		Sama_1783	0.65	-0.8
2,175,451	-		Sama_1783	0.72	-0.9
2,175,543	-		Sama_1783	0.82	-0.2
2,175,721	+				+1.5
2,175,722	-				+1.0
2,175,722	-				+0.2
2,175,722	-				-0.5
2,175,722	-				-0.6
2,175,722	-				-0.3
2,175,722	-				-0.5
2,175,746	-				+1.5
2,175,796	+				-1.2
2,175,800	-				+1.0
2,175,863	+				+2.3
2,175,864	-				+2.2
2,175,864	-				-1.4
2,175,936	+				+0.3
2,175,937	-				-1.2
2,175,937	-				+0.2
2,175,965	+				+0.5
2,176,004	+		Sama_1784	0.12	+0.9
2,176,084	+		Sama_1784	0.19	-1.2
2,176,085	-		Sama_1784	0.19	+0.8
2,176,085	-		Sama_1784	0.19	-0.9
2,176,103	-		Sama_1784	0.20	+0.4
2,176,103	-		Sama_1784	0.20	+0.5
2,176,112	-		Sama_1784	0.21	-0.3
2,176,112	-		Sama_1784	0.21	-0.3
2,176,142	+		Sama_1784	0.23	+1.8
2,176,268	+		Sama_1784	0.33	-0.9
2,176,269	-		Sama_1784	0.33	+0.3
2,176,375	+		Sama_1784	0.41	-0.1
2,176,378	+		Sama_1784	0.41	-0.8
2,176,439	+		Sama_1784	0.46	-0.8
2,176,439	+		Sama_1784	0.46	-1.3
2,176,563	+		Sama_1784	0.55	-0.2
2,176,593	-		Sama_1784	0.58	+0.5
2,176,613	+		Sama_1784	0.59	-1.2
2,176,613	+		Sama_1784	0.59	-0.6
2,176,668	-		Sama_1784	0.63	-1.6
2,176,784	+		Sama_1784	0.72	+0.7
2,176,995	-		Sama_1784	0.88	-2.6
2,177,018	+				-1.6
2,177,018	+				-1.1
2,177,093	+				-1.2
2,177,174	+				-0.0
2,177,174	+				-0.6
2,177,174	+				-0.3
2,177,193	+				-0.0
2,177,193	+				-0.9
2,177,194	-				-0.8
2,177,195	+				+0.5
2,177,195	+				-1.5
2,177,195	+				-0.5
2,177,195	+				+0.3
2,177,196	-				-1.6
2,177,210	+				-0.6
2,177,210	+				-0.5
2,177,247	+				+0.4
2,177,267	+				-0.3
2,177,268	-				+1.0
2,177,281	-				+0.1
2,177,294	+				+0.2
2,177,294	+				-0.1
2,177,294	+				-0.5
2,177,295	-				-0.6
2,177,309	+				-0.2
2,177,381	+				-1.9
2,177,425	+				-2.5
2,177,426	-				-0.5
2,177,426	-				+0.2
2,177,474	+		Sama_1785	0.20	-1.3
2,177,485	+		Sama_1785	0.23	-0.2
2,177,485	+		Sama_1785	0.23	-0.9
2,177,486	-		Sama_1785	0.23	-0.7
2,177,486	-		Sama_1785	0.23	+0.7
2,177,670	+		Sama_1785	0.68	+1.5
2,177,727	+		Sama_1785	0.82	-1.0
2,177,728	-		Sama_1785	0.83	-0.5
2,177,736	-		Sama_1785	0.85	+0.7
2,177,736	-		Sama_1785	0.85	-1.3
2,177,736	-		Sama_1785	0.85	-0.8
2,177,736	-		Sama_1785	0.85	-0.3
2,177,800	+				-0.5
2,177,820	-				-0.8
2,177,853	+				+0.2
2,177,854	-				-0.2
2,177,862	-				-0.3
2,177,862	-				-1.2
2,177,862	-				+0.3
2,177,871	-				-0.3
2,177,966	+				-1.4
2,177,967	-				-0.2
2,177,967	-				-1.7
2,177,978	+				+0.4
2,177,993	+				+2.0
2,178,120	-		Sama_1786	0.13	-1.4
2,178,122	+		Sama_1786	0.13	-0.3
2,178,123	-		Sama_1786	0.13	+0.5
2,178,142	-		Sama_1786	0.14	-1.9