Strain Fitness in Shewanella amazonensis SB2B around Sama_1756

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,146,518	+		Sama_1755	0.18	+1.3
2,146,519	-		Sama_1755	0.18	-0.0
2,146,568	-		Sama_1755	0.22	-0.1
2,146,581	+		Sama_1755	0.23	+0.8
2,146,619	+		Sama_1755	0.27	+1.6
2,146,619	+		Sama_1755	0.27	+0.2
2,146,619	+		Sama_1755	0.27	-0.5
2,146,662	-		Sama_1755	0.31	+1.3
2,146,682	+		Sama_1755	0.33	-0.3
2,146,683	-		Sama_1755	0.33	-0.0
2,146,694	+		Sama_1755	0.34	-1.3
2,146,695	-		Sama_1755	0.34	-1.1
2,146,737	-		Sama_1755	0.38	-0.8
2,146,737	-		Sama_1755	0.38	+0.1
2,146,749	+		Sama_1755	0.39	+0.5
2,146,996	+		Sama_1755	0.61	-0.4
2,147,006	+		Sama_1755	0.62	-0.7
2,147,058	+		Sama_1755	0.67	+0.4
2,147,091	-		Sama_1755	0.70	-0.8
2,147,132	+		Sama_1755	0.74	-1.1
2,147,132	+		Sama_1755	0.74	+0.9
2,147,330	+				+0.2
2,147,378	+				+0.2
2,147,438	-				+2.5
2,147,454	+				+0.2
2,147,455	-				+0.9
2,147,455	-				-0.5
2,147,612	+		Sama_1756	0.26	+1.9
2,147,612	+		Sama_1756	0.26	-1.0
2,147,613	-		Sama_1756	0.26	+2.5
2,147,613	-		Sama_1756	0.26	+0.5
2,147,624	-		Sama_1756	0.28	+0.2
2,147,666	+		Sama_1756	0.38	+1.5
2,147,666	+		Sama_1756	0.38	+0.2
2,147,870	+		Sama_1756	0.86	+1.4
2,147,929	-				-0.3
2,147,952	+				+0.5
2,147,952	+				-0.5
2,147,953	-				-2.3
2,147,990	+				-0.5
2,147,991	-				-0.5
2,148,034	+				-0.0
2,148,040	-				+2.1
2,148,060	+				-0.5
2,148,081	+				+0.5
2,148,082	-				-0.6
2,148,131	+				+0.1
2,148,131	+				+1.0
2,148,132	-				-0.2
2,148,244	+				+0.0
2,148,244	+				+0.7
2,148,247	-				+2.0
2,148,328	+		Sama_1757	0.12	+1.0
2,148,328	+		Sama_1757	0.12	-0.3
2,148,330	+		Sama_1757	0.12	-0.0
2,148,367	+		Sama_1757	0.14	+1.0
2,148,391	+		Sama_1757	0.15	+1.5
2,148,392	-		Sama_1757	0.15	+0.3
2,148,396	+		Sama_1757	0.15	+0.0
2,148,408	+		Sama_1757	0.16	+1.5
2,148,501	+		Sama_1757	0.20	-0.5
2,148,501	+		Sama_1757	0.20	-0.4
2,148,501	+		Sama_1757	0.20	+1.6
2,148,503	+		Sama_1757	0.20	-0.3
2,148,503	+		Sama_1757	0.20	-0.7
2,148,503	+		Sama_1757	0.20	-0.6
2,148,503	+		Sama_1757	0.20	-0.0
2,148,503	+		Sama_1757	0.20	-3.0
2,148,503	+		Sama_1757	0.20	+0.7
2,148,504	-		Sama_1757	0.20	-1.0
2,148,504	-		Sama_1757	0.20	-0.9
2,148,504	-		Sama_1757	0.20	-0.1
2,148,504	-		Sama_1757	0.20	-0.4
2,148,575	+		Sama_1757	0.24	+0.7
2,148,899	+		Sama_1757	0.39	+0.4
2,148,900	-		Sama_1757	0.39	+1.0