Strain Fitness in Shewanella amazonensis SB2B around Sama_1711

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,089,930	+				+3.5
2,089,931	-				+3.7
2,089,990	-				+5.0
2,090,053	+		Sama_1710	0.14	+3.3
2,090,171	+		Sama_1710	0.26	+3.4
2,090,172	-		Sama_1710	0.26	+5.5
2,090,233	+		Sama_1710	0.32	+2.2
2,090,261	+		Sama_1710	0.35	+1.8
2,090,300	+		Sama_1710	0.39	+3.8
2,090,324	+		Sama_1710	0.42	+4.8
2,090,325	-		Sama_1710	0.42	+2.9
2,090,358	+		Sama_1710	0.45	+2.8
2,090,447	+		Sama_1710	0.54	+4.6
2,090,483	+		Sama_1710	0.58	+3.8
2,090,838	-				+2.6
2,090,838	-				+2.6
2,090,891	+				+3.3
2,090,891	+				+2.0
2,090,903	-				+5.2
2,090,908	+				+4.1
2,090,918	-				+2.7
2,090,989	+				+3.6
2,090,989	+				+3.9
2,090,990	-				+2.6
2,091,040	-				+2.8
2,091,066	+		Sama_1711	0.10	+3.2
2,091,066	+		Sama_1711	0.10	+3.6
2,091,066	+		Sama_1711	0.10	+3.6
2,091,122	+		Sama_1711	0.14	+3.2
2,091,122	+		Sama_1711	0.14	+3.2
2,091,405	+		Sama_1711	0.32	+3.5
2,091,458	+		Sama_1711	0.35	+2.4
2,091,459	-		Sama_1711	0.35	+0.6
2,091,668	+		Sama_1711	0.48	+3.3
2,091,670	+		Sama_1711	0.48	+3.7
2,091,670	+		Sama_1711	0.48	+3.7
2,091,670	+		Sama_1711	0.48	+3.7
2,091,679	+		Sama_1711	0.49	+2.9
2,091,681	+		Sama_1711	0.49	+2.8
2,091,681	+		Sama_1711	0.49	+3.9
2,091,681	+		Sama_1711	0.49	+2.0
2,091,681	+		Sama_1711	0.49	+4.1
2,091,681	+		Sama_1711	0.49	+3.6
2,091,681	+		Sama_1711	0.49	+2.3
2,091,682	-		Sama_1711	0.49	+1.9
2,091,682	-		Sama_1711	0.49	+4.5
2,091,682	-		Sama_1711	0.49	+2.4
2,091,690	-		Sama_1711	0.50	+5.0
2,091,751	-		Sama_1711	0.54	+1.3
2,091,869	+		Sama_1711	0.61	+3.4
2,091,869	+		Sama_1711	0.61	+3.5
2,091,929	+		Sama_1711	0.65	+2.6
2,091,930	-		Sama_1711	0.65	+2.6
2,092,015	+		Sama_1711	0.70	+4.6
2,092,016	-		Sama_1711	0.70	+4.2
2,092,049	+		Sama_1711	0.72	+4.7
2,092,050	-		Sama_1711	0.72	+4.1
2,092,050	-		Sama_1711	0.72	+0.4
2,092,050	-		Sama_1711	0.72	+4.5
2,092,050	-		Sama_1711	0.72	+3.5
2,092,050	-		Sama_1711	0.72	+4.3
2,092,072	+		Sama_1711	0.74	+2.3
2,092,109	-		Sama_1711	0.76	+1.6
2,092,270	+		Sama_1711	0.86	+3.3
2,092,271	-		Sama_1711	0.86	+3.8
2,092,274	-		Sama_1711	0.87	+5.0
2,092,365	+				+1.6
2,092,365	+				+3.5
2,092,374	+				+4.0
2,092,584	+				-1.2
2,092,585	-				+1.9
2,092,606	+				+1.9