Strain Fitness in Shewanella amazonensis SB2B around Sama_1696

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,075,006	+		Sama_1695	0.30	-0.0
2,075,006	+		Sama_1695	0.30	+0.4
2,075,030	-		Sama_1695	0.32	-0.4
2,075,055	-		Sama_1695	0.34	+0.5
2,075,066	+		Sama_1695	0.35	-0.1
2,075,066	+		Sama_1695	0.35	-0.4
2,075,066	+		Sama_1695	0.35	+1.2
2,075,066	+		Sama_1695	0.35	-0.0
2,075,067	-		Sama_1695	0.35	+1.2
2,075,088	-		Sama_1695	0.36	-0.2
2,075,165	+		Sama_1695	0.42	+0.6
2,075,278	+		Sama_1695	0.51	-1.2
2,075,324	+		Sama_1695	0.54	-1.7
2,075,325	-		Sama_1695	0.54	-1.4
2,075,367	-		Sama_1695	0.57	-0.4
2,075,435	-		Sama_1695	0.62	-1.0
2,075,457	+		Sama_1695	0.64	-0.6
2,075,458	-		Sama_1695	0.64	+0.6
2,075,514	+		Sama_1695	0.68	+2.0
2,075,587	-		Sama_1695	0.74	-1.6
2,075,587	-		Sama_1695	0.74	-0.8
2,075,630	+		Sama_1695	0.77	-1.1
2,075,630	+		Sama_1695	0.77	+2.6
2,075,630	+		Sama_1695	0.77	+1.0
2,075,630	+		Sama_1695	0.77	+0.2
2,075,631	-		Sama_1695	0.77	-0.5
2,075,631	-		Sama_1695	0.77	-1.0
2,075,631	-		Sama_1695	0.77	+2.0
2,075,632	+		Sama_1695	0.77	-1.0
2,075,633	-		Sama_1695	0.77	+0.2
2,075,708	-		Sama_1695	0.83	-0.3
2,075,798	+		Sama_1695	0.90	+1.6
2,075,799	-		Sama_1695	0.90	+0.2
2,075,799	-		Sama_1695	0.90	-0.2
2,075,799	-		Sama_1695	0.90	+0.2
2,075,799	-		Sama_1695	0.90	-0.3
2,075,875	+				-0.0
2,075,876	-				+0.6
2,075,931	+				-1.6
2,075,932	-				+0.8
2,075,932	-				+0.2
2,075,932	-				-0.9
2,075,932	-				-1.9
2,075,937	+				+0.2
2,075,937	+				-0.7
2,075,938	-				-0.4
2,075,938	-				-0.2
2,075,954	-				-1.8
2,075,961	-				-0.8
2,075,994	+				-0.2
2,075,994	+				-0.9
2,075,994	+				+2.6
2,076,005	-		Sama_1696	0.10	-0.9
2,076,009	+		Sama_1696	0.11	+0.1
2,076,110	-		Sama_1696	0.28	-1.1
2,076,110	-		Sama_1696	0.28	+0.7
2,076,110	-		Sama_1696	0.28	+0.9
2,076,110	-		Sama_1696	0.28	-0.8
2,076,110	-		Sama_1696	0.28	+1.7
2,076,203	-		Sama_1696	0.44	-0.0
2,076,288	+		Sama_1696	0.58	-0.0
2,076,289	-		Sama_1696	0.59	-0.0
2,076,301	+		Sama_1696	0.61	+1.0
2,076,302	-		Sama_1696	0.61	-2.2
2,076,305	+		Sama_1696	0.61	+1.0
2,076,363	+		Sama_1696	0.71	+0.2
2,076,363	+		Sama_1696	0.71	-0.9
2,076,364	-		Sama_1696	0.71	-0.1
2,076,364	-		Sama_1696	0.71	+0.9
2,076,364	-		Sama_1696	0.71	+1.0
2,076,379	+		Sama_1696	0.74	-0.6
2,076,380	-		Sama_1696	0.74	-2.1
2,076,469	+		Sama_1696	0.89	-0.6
2,076,475	+				-0.4
2,076,475	+				+1.2
2,076,476	-				-0.5
2,076,476	-				+1.3
2,076,476	-				-1.5
2,076,476	-				-0.0
2,076,476	-				+1.6
2,076,533	-				+1.0
2,076,568	+				-0.8
2,076,569	-				-1.0
2,076,569	-				-0.6
2,076,589	+				-0.7
2,076,644	+				-0.6
2,076,697	+				-1.3
2,076,697	+				+0.8
2,076,697	+				-0.4
2,076,698	-				-1.4
2,076,723	-				+1.0
2,076,787	+				-1.4
2,076,820	-				-2.1
2,076,897	+		Sama_1697	0.15	+1.7
2,076,898	-		Sama_1697	0.15	+0.1
2,076,929	+		Sama_1697	0.18	+2.6
2,076,930	-		Sama_1697	0.18	-0.2
2,076,930	-		Sama_1697	0.18	-0.2
2,076,930	-		Sama_1697	0.18	+0.1
2,076,951	+		Sama_1697	0.20	+0.8
2,076,951	+		Sama_1697	0.20	+0.4
2,076,952	-		Sama_1697	0.20	-0.0
2,076,980	+		Sama_1697	0.22	+2.6
2,076,986	+		Sama_1697	0.23	-0.0
2,076,986	+		Sama_1697	0.23	-0.0
2,076,987	-		Sama_1697	0.23	-3.2
2,076,987	-		Sama_1697	0.23	+0.2
2,077,030	+		Sama_1697	0.26	-0.4
2,077,039	-		Sama_1697	0.27	+2.0
2,077,039	-		Sama_1697	0.27	-0.7
2,077,039	-		Sama_1697	0.27	+0.2
2,077,041	+		Sama_1697	0.27	-2.2
2,077,042	-		Sama_1697	0.27	-1.0
2,077,042	-		Sama_1697	0.27	-2.4
2,077,042	-		Sama_1697	0.27	-0.3
2,077,042	-		Sama_1697	0.27	+1.4
2,077,135	-		Sama_1697	0.35	-1.0
2,077,152	+		Sama_1697	0.36	-0.0
2,077,152	+		Sama_1697	0.36	-0.4
2,077,234	-		Sama_1697	0.43	+2.4
2,077,234	-		Sama_1697	0.43	+0.8
2,077,283	+		Sama_1697	0.47	-1.3
2,077,293	+		Sama_1697	0.48	-0.6
2,077,322	-		Sama_1697	0.50	+0.6
2,077,348	-		Sama_1697	0.52	-0.1
2,077,373	+		Sama_1697	0.54	+1.1
2,077,374	-		Sama_1697	0.54	-0.6
2,077,374	-		Sama_1697	0.54	+1.6
2,077,447	-		Sama_1697	0.60	+0.1
2,077,496	-		Sama_1697	0.65	+0.2
2,077,496	-		Sama_1697	0.65	-1.4