Strain Fitness in Shewanella amazonensis SB2B around Sama_1673

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,044,342	+		Sama_1671	0.40	-1.1
2,044,342	+		Sama_1671	0.40	+1.0
2,044,343	-		Sama_1671	0.41	+0.6
2,044,368	+		Sama_1671	0.43	+1.0
2,044,369	-		Sama_1671	0.43	-0.9
2,044,386	-		Sama_1671	0.44	-0.1
2,044,483	+		Sama_1671	0.53	-1.0
2,044,633	-		Sama_1671	0.66	-0.4
2,044,811	-		Sama_1671	0.81	+1.0
2,044,848	+		Sama_1671	0.84	-0.0
2,044,849	-		Sama_1671	0.84	+0.2
2,044,893	+		Sama_1671	0.88	-1.5
2,044,894	-		Sama_1671	0.88	-0.0
2,044,894	-		Sama_1671	0.88	-1.8
2,044,894	-		Sama_1671	0.88	-0.0
2,045,068	+		Sama_1672	0.22	+0.1
2,045,069	-		Sama_1672	0.23	+0.6
2,045,075	+		Sama_1672	0.25	+1.8
2,045,140	+		Sama_1672	0.50	-1.1
2,045,140	+		Sama_1672	0.50	-0.9
2,045,140	+		Sama_1672	0.50	+3.2
2,045,141	-		Sama_1672	0.50	-1.1
2,045,141	-		Sama_1672	0.50	-0.0
2,045,204	+		Sama_1672	0.74	-1.0
2,045,270	+				+2.4
2,045,270	+				+0.2
2,045,270	+				-1.5
2,045,271	-				+0.7
2,045,300	-				-0.5
2,045,462	+		Sama_1673	0.24	-0.1
2,045,501	-		Sama_1673	0.29	-1.1
2,045,535	+		Sama_1673	0.34	-2.1
2,045,535	+		Sama_1673	0.34	-0.0
2,045,535	+		Sama_1673	0.34	-0.6
2,045,535	+		Sama_1673	0.34	+1.6
2,045,546	+		Sama_1673	0.35	-1.6
2,045,568	+		Sama_1673	0.38	+0.4
2,045,569	+		Sama_1673	0.38	-0.6
2,045,569	+		Sama_1673	0.38	+0.2
2,045,569	+		Sama_1673	0.38	-1.3
2,045,569	+		Sama_1673	0.38	-0.2
2,045,569	+		Sama_1673	0.38	-0.8
2,045,569	+		Sama_1673	0.38	-0.4
2,045,569	+		Sama_1673	0.38	+0.7
2,045,569	+		Sama_1673	0.38	-0.0
2,045,570	-		Sama_1673	0.38	-0.4
2,045,570	-		Sama_1673	0.38	-0.0
2,045,570	-		Sama_1673	0.38	-2.1
2,045,570	-		Sama_1673	0.38	+0.1
2,045,573	+		Sama_1673	0.38	-1.4
2,045,660	+		Sama_1673	0.50	+2.6
2,045,660	+		Sama_1673	0.50	-0.5
2,045,773	+		Sama_1673	0.64	+0.6
2,045,773	+		Sama_1673	0.64	+0.3
2,045,773	+		Sama_1673	0.64	-1.2
2,045,788	+		Sama_1673	0.66	-0.9
2,045,847	-		Sama_1673	0.74	+0.4
2,045,848	+		Sama_1673	0.74	-2.3
2,045,848	+		Sama_1673	0.74	-0.0
2,045,848	+		Sama_1673	0.74	-0.8
2,045,849	-		Sama_1673	0.74	-0.2
2,045,849	-		Sama_1673	0.74	-1.2
2,045,857	-		Sama_1673	0.75	-0.4
2,045,857	-		Sama_1673	0.75	+0.2
2,045,921	+		Sama_1673	0.83	-0.9
2,046,052	+				+0.6
2,046,052	+				-0.9
2,046,052	+				-1.3
2,046,052	+				-1.1
2,046,053	-				-0.4
2,046,070	+				-0.0
2,046,070	+				-0.6
2,046,071	-				+0.2
2,046,088	+				-0.8
2,046,088	+				+0.6
2,046,089	-				+1.0
2,046,156	-				-0.4
2,046,215	-				+1.0
2,046,379	-				-1.0
2,046,379	-				+1.2
2,046,408	+		Sama_1674	0.11	-0.7
2,046,408	+		Sama_1674	0.11	-2.6
2,046,435	+		Sama_1674	0.12	+1.4
2,046,435	+		Sama_1674	0.12	-0.0
2,046,435	+		Sama_1674	0.12	-1.2
2,046,475	-		Sama_1674	0.14	+0.6
2,046,532	+		Sama_1674	0.16	-0.8
2,046,533	-		Sama_1674	0.16	-0.6
2,046,643	+		Sama_1674	0.21	+0.6
2,046,643	+		Sama_1674	0.21	+1.6
2,046,643	+		Sama_1674	0.21	-1.2
2,046,868	-		Sama_1674	0.31	+0.4
2,046,868	-		Sama_1674	0.31	+0.1
2,046,868	-		Sama_1674	0.31	-0.2
2,046,946	+		Sama_1674	0.34	+0.6
2,046,946	+		Sama_1674	0.34	+1.6
2,046,946	+		Sama_1674	0.34	-0.9
2,046,946	+		Sama_1674	0.34	-0.6
2,046,946	+		Sama_1674	0.34	+0.6
2,046,946	+		Sama_1674	0.34	-0.4
2,046,947	-		Sama_1674	0.34	-2.1
2,046,947	-		Sama_1674	0.34	+1.2
2,046,947	-		Sama_1674	0.34	-0.2
2,046,947	-		Sama_1674	0.34	-0.9
2,046,947	-		Sama_1674	0.34	+0.2
2,046,947	-		Sama_1674	0.34	-1.7
2,046,947	-		Sama_1674	0.34	-1.6
2,046,947	-		Sama_1674	0.34	+0.6