Strain Fitness in Shewanella amazonensis SB2B around Sama_1670

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,041,886	+		Sama_1668	0.63	-0.2
2,041,937	-		Sama_1668	0.68	-0.6
2,041,969	+		Sama_1668	0.71	-1.5
2,042,083	+		Sama_1668	0.81	-0.8
2,042,083	+		Sama_1668	0.81	+1.6
2,042,083	+		Sama_1668	0.81	+0.2
2,042,157	+		Sama_1668	0.88	+0.6
2,042,205	+				-0.9
2,042,318	+				-0.8
2,042,319	-				+0.6
2,042,363	+				-0.0
2,042,368	+				+0.2
2,042,431	+				-0.6
2,042,518	-				+1.6
2,042,566	+		Sama_1669	0.14	+0.6
2,042,567	-		Sama_1669	0.15	+0.2
2,042,567	-		Sama_1669	0.15	-1.2
2,042,681	+		Sama_1669	0.46	-0.9
2,042,681	+		Sama_1669	0.46	-1.6
2,042,682	-		Sama_1669	0.46	+1.6
2,042,682	-		Sama_1669	0.46	-2.7
2,042,682	-		Sama_1669	0.46	+1.6
2,042,726	-		Sama_1669	0.58	-0.9
2,042,726	-		Sama_1669	0.58	-0.4
2,042,731	+		Sama_1669	0.60	-1.9
2,042,802	-		Sama_1669	0.79	+0.2
2,042,897	-				-0.2
2,043,130	+		Sama_1670	0.25	-0.9
2,043,206	-		Sama_1670	0.33	-0.0
2,043,370	+		Sama_1670	0.49	-1.0
2,043,370	+		Sama_1670	0.49	+0.8
2,043,371	-		Sama_1670	0.49	-0.8
2,043,371	-		Sama_1670	0.49	-0.0
2,043,560	-		Sama_1670	0.68	-0.8
2,043,560	-		Sama_1670	0.68	-1.4
2,043,560	-		Sama_1670	0.68	-0.2
2,043,560	-		Sama_1670	0.68	-1.4
2,043,614	-		Sama_1670	0.73	+0.7
2,043,614	-		Sama_1670	0.73	-0.0
2,043,614	-		Sama_1670	0.73	-2.5
2,043,679	+		Sama_1670	0.80	-0.6
2,043,680	-		Sama_1670	0.80	-1.3
2,043,680	-		Sama_1670	0.80	+1.2
2,043,680	-		Sama_1670	0.80	-1.3
2,043,680	-		Sama_1670	0.80	-1.0
2,043,709	+		Sama_1670	0.83	-1.0
2,043,710	-		Sama_1670	0.83	-1.9
2,043,730	-		Sama_1670	0.85	-1.0
2,043,793	-				-1.4
2,043,793	-				-0.9
2,043,828	+				+1.0
2,043,867	+				+2.0
2,043,873	+				-0.6
2,043,904	-				-0.2
2,043,906	+				+0.6
2,043,906	+				-1.3
2,043,906	+				-0.5
2,043,907	-				-0.4
2,044,105	-		Sama_1671	0.20	-0.4
2,044,240	-		Sama_1671	0.32	+1.2
2,044,342	+		Sama_1671	0.40	-1.1
2,044,342	+		Sama_1671	0.40	+1.0
2,044,343	-		Sama_1671	0.41	+0.6
2,044,368	+		Sama_1671	0.43	+1.0
2,044,369	-		Sama_1671	0.43	-0.9
2,044,386	-		Sama_1671	0.44	-0.1
2,044,483	+		Sama_1671	0.53	-1.0
2,044,633	-		Sama_1671	0.66	-0.4
2,044,811	-		Sama_1671	0.81	+1.0
2,044,848	+		Sama_1671	0.84	-0.0
2,044,849	-		Sama_1671	0.84	+0.2