Strain Fitness in Shewanella amazonensis SB2B around Sama_1665

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,037,545	+		Sama_1664	0.34	-0.8
2,037,618	+		Sama_1664	0.40	-1.1
2,037,619	-		Sama_1664	0.40	-1.6
2,037,638	+		Sama_1664	0.41	-0.7
2,037,638	+		Sama_1664	0.41	-0.2
2,037,638	+		Sama_1664	0.41	-0.0
2,037,639	-		Sama_1664	0.41	-0.0
2,037,709	+		Sama_1664	0.47	-1.1
2,038,097	+		Sama_1664	0.78	+0.4
2,038,098	-		Sama_1664	0.78	-1.1
2,038,164	-		Sama_1664	0.83	-0.0
2,038,212	+		Sama_1664	0.87	+0.2
2,038,307	+				+2.6
2,038,307	+				-0.4
2,038,307	+				-1.6
2,038,307	+				-0.4
2,038,307	+				-1.0
2,038,307	+				+3.1
2,038,307	+				-0.9
2,038,341	+				+0.2
2,038,391	-				+1.0
2,038,451	+				-0.5
2,038,451	+				+1.4
2,038,478	+				-0.0
2,038,478	+				-0.8
2,038,479	-				-0.9
2,038,479	-				-1.2
2,038,528	+				+1.6
2,038,529	-				-0.2
2,038,550	+				+0.2
2,038,574	+		Sama_1665	0.11	+0.8
2,038,574	+		Sama_1665	0.11	+0.2
2,038,592	-		Sama_1665	0.15	-1.3
2,038,592	-		Sama_1665	0.15	-0.8
2,038,634	+		Sama_1665	0.25	-0.4
2,038,634	+		Sama_1665	0.25	+0.6
2,038,735	-		Sama_1665	0.50	-0.6
2,038,814	+		Sama_1665	0.68	-1.6
2,038,814	+		Sama_1665	0.68	-0.6
2,038,814	+		Sama_1665	0.68	-0.9
2,038,814	+		Sama_1665	0.68	-0.9
2,038,815	-		Sama_1665	0.69	-0.0
2,038,815	-		Sama_1665	0.69	-1.2
2,038,946	+				-0.8
2,038,947	-				-0.8
2,038,976	+				-2.4
2,038,976	+				+1.6
2,038,976	+				+1.6
2,038,976	+				-0.2
2,038,976	+				-1.6
2,038,976	+				-1.2
2,038,977	-				-0.2
2,039,027	+				-2.1
2,039,032	+				-1.4
2,039,086	-				+1.3
2,039,170	+		Sama_1666	0.39	+0.6
2,039,235	+		Sama_1666	0.62	-1.1
2,039,329	+				-1.3
2,039,330	-				-0.4
2,039,348	+				+0.8
2,039,374	-				+0.2
2,039,465	+				-0.4
2,039,603	+		Sama_1667	0.14	+1.6
2,039,604	-		Sama_1667	0.14	-0.8
2,039,635	+		Sama_1667	0.16	-1.5
2,039,636	-		Sama_1667	0.16	-0.7
2,039,636	-		Sama_1667	0.16	-0.0
2,039,636	-		Sama_1667	0.16	-1.9
2,039,636	-		Sama_1667	0.16	-0.1
2,039,638	+		Sama_1667	0.16	-3.1
2,039,638	+		Sama_1667	0.16	+2.0
2,039,638	+		Sama_1667	0.16	-0.0
2,039,638	+		Sama_1667	0.16	-1.1
2,039,638	+		Sama_1667	0.16	+1.2
2,039,638	+		Sama_1667	0.16	-0.2
2,039,638	+		Sama_1667	0.16	+0.2
2,039,639	-		Sama_1667	0.16	-0.2
2,039,639	-		Sama_1667	0.16	-1.7
2,039,639	-		Sama_1667	0.16	+0.8
2,039,639	-		Sama_1667	0.16	+0.2
2,039,639	-		Sama_1667	0.16	+0.6
2,039,639	-		Sama_1667	0.16	+0.6
2,039,648	+		Sama_1667	0.17	-1.8
2,039,648	+		Sama_1667	0.17	-2.0
2,039,649	-		Sama_1667	0.17	+1.0
2,039,649	-		Sama_1667	0.17	-1.0
2,039,649	-		Sama_1667	0.17	-0.2
2,039,701	+		Sama_1667	0.20	-1.3
2,039,702	-		Sama_1667	0.20	-0.0
2,039,702	-		Sama_1667	0.20	-0.6
2,039,840	-		Sama_1667	0.28	-1.3
2,039,840	-		Sama_1667	0.28	-0.8
2,039,840	-		Sama_1667	0.28	+0.6
2,039,863	+		Sama_1667	0.29	-0.8
2,039,863	+		Sama_1667	0.29	-0.6
2,039,863	+		Sama_1667	0.29	+4.8
2,039,864	-		Sama_1667	0.29	+1.2
2,039,879	+		Sama_1667	0.30	+1.0
2,039,899	+		Sama_1667	0.31	-0.6
2,039,900	-		Sama_1667	0.31	+1.6
2,039,900	-		Sama_1667	0.31	-0.4
2,039,910	+		Sama_1667	0.31	-0.0
2,039,910	+		Sama_1667	0.31	+1.0