Strain Fitness in Shewanella amazonensis SB2B around Sama_1623

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,987,411	+		Sama_1622	0.65	-0.1
1,987,411	+		Sama_1622	0.65	+1.1
1,987,411	+		Sama_1622	0.65	+1.6
1,987,515	+		Sama_1622	0.69	+1.0
1,987,564	+		Sama_1622	0.71	+0.4
1,987,564	+		Sama_1622	0.71	+1.0
1,987,582	+		Sama_1622	0.71	-0.8
1,987,582	+		Sama_1622	0.71	-1.8
1,987,583	-		Sama_1622	0.71	+0.0
1,987,594	+		Sama_1622	0.72	+0.6
1,987,594	+		Sama_1622	0.72	+2.0
1,987,595	-		Sama_1622	0.72	-0.4
1,987,610	+		Sama_1622	0.73	+1.6
1,987,610	+		Sama_1622	0.73	-0.6
1,987,645	+		Sama_1622	0.74	-1.5
1,987,646	-		Sama_1622	0.74	-0.3
1,987,646	-		Sama_1622	0.74	-1.4
1,987,646	-		Sama_1622	0.74	-1.0
1,987,678	+		Sama_1622	0.75	-1.0
1,987,679	-		Sama_1622	0.75	-2.5
1,987,679	-		Sama_1622	0.75	-0.1
1,987,682	+		Sama_1622	0.75	+1.2
1,987,705	+		Sama_1622	0.76	+0.9
1,987,756	+		Sama_1622	0.78	+0.0
1,987,756	+		Sama_1622	0.78	+0.8
1,987,757	-		Sama_1622	0.78	-0.5
1,987,837	+		Sama_1622	0.82	+2.6
1,987,838	-		Sama_1622	0.82	-1.3
1,987,838	-		Sama_1622	0.82	+0.4
1,987,943	-		Sama_1622	0.86	-1.1
1,987,947	+		Sama_1622	0.86	+1.1
1,987,948	-		Sama_1622	0.86	-2.0
1,987,970	+		Sama_1622	0.87	+0.6
1,987,971	-		Sama_1622	0.87	-0.2
1,988,009	+		Sama_1622	0.89	+0.2
1,988,021	-		Sama_1622	0.89	+0.6
1,988,049	+				-0.8
1,988,131	-				-0.6
1,988,467	+		Sama_1623	0.34	-0.2
1,988,467	+		Sama_1623	0.34	-0.5
1,988,467	+		Sama_1623	0.34	+0.5
1,988,468	-		Sama_1623	0.34	-2.1
1,988,468	-		Sama_1623	0.34	-0.7
1,988,468	-		Sama_1623	0.34	-1.4
1,988,481	-		Sama_1623	0.37	+1.2
1,988,484	+		Sama_1623	0.37	+1.6
1,988,526	+		Sama_1623	0.46	+0.8
1,988,526	+		Sama_1623	0.46	-0.6
1,988,527	-		Sama_1623	0.46	-1.1
1,988,545	+		Sama_1623	0.50	+1.3
1,988,546	-		Sama_1623	0.50	+1.0
1,988,555	+		Sama_1623	0.52	+0.2
1,988,580	-		Sama_1623	0.58	+1.4
1,988,619	+		Sama_1623	0.66	-0.7
1,988,619	+		Sama_1623	0.66	+1.6
1,988,619	+		Sama_1623	0.66	-0.4
1,988,633	+		Sama_1623	0.69	-0.3
1,988,636	+		Sama_1623	0.69	-1.5
1,988,636	+		Sama_1623	0.69	-1.6
1,988,636	+		Sama_1623	0.69	-0.5
1,988,636	+		Sama_1623	0.69	-2.6
1,988,636	+		Sama_1623	0.69	+1.5
1,988,636	+		Sama_1623	0.69	-1.0
1,988,637	-		Sama_1623	0.70	-1.4
1,988,667	+		Sama_1623	0.76	-0.4
1,988,772	-				+1.4
1,988,779	-				-0.6
1,988,788	+				-0.7
1,988,788	+				+1.6
1,988,789	-				-0.6
1,988,906	-		Sama_1624	0.20	+0.6
1,988,975	+		Sama_1624	0.32	+0.2
1,988,975	+		Sama_1624	0.32	-0.1
1,988,975	+		Sama_1624	0.32	+0.4
1,988,975	+		Sama_1624	0.32	-0.4
1,988,975	+		Sama_1624	0.32	+0.4
1,989,068	-		Sama_1624	0.47	+0.3
1,989,109	+		Sama_1624	0.54	-1.2
1,989,121	+		Sama_1624	0.56	+0.6
1,989,236	+		Sama_1624	0.76	-0.9
1,989,236	+		Sama_1624	0.76	-1.1
1,989,236	+		Sama_1624	0.76	-0.0
1,989,313	+		Sama_1624	0.89	-0.0
1,989,467	+				-1.2
1,989,512	+				-0.2
1,989,587	-				+1.2
1,989,631	-		Sama_1625	0.15	+0.4