Strain Fitness in Shewanella amazonensis SB2B around Sama_1599

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,951,855	-				-0.8
1,951,855	-				-0.8
1,951,862	-				+0.6
1,951,872	+				-1.2
1,951,872	+				+1.1
1,951,872	+				-0.3
1,951,872	+				+1.1
1,951,872	+				-0.5
1,951,873	-				-1.3
1,951,873	-				-1.2
1,951,873	-				-0.2
1,951,873	-				-0.4
1,951,873	-				-1.5
1,951,875	-				-0.5
1,951,930	+				-0.7
1,951,990	+				+2.0
1,951,991	-				+1.6
1,952,046	+				-0.9
1,952,047	-				-0.6
1,952,071	+				-1.7
1,952,253	+		Sama_1598	0.35	+1.1
1,952,253	+		Sama_1598	0.35	+0.3
1,952,292	+		Sama_1598	0.41	-1.2
1,952,427	+		Sama_1598	0.60	-1.3
1,952,427	+		Sama_1598	0.60	+0.6
1,952,428	-		Sama_1598	0.60	-0.7
1,952,455	+		Sama_1598	0.64	+2.2
1,952,455	+		Sama_1598	0.64	+0.3
1,952,456	-		Sama_1598	0.64	+1.2
1,952,621	+		Sama_1598	0.88	-0.3
1,952,621	+		Sama_1598	0.88	+0.3
1,952,621	+		Sama_1598	0.88	+2.6
1,952,622	-		Sama_1598	0.89	-1.2
1,952,623	+		Sama_1598	0.89	+0.1
1,952,623	+		Sama_1598	0.89	-0.1
1,952,623	+		Sama_1598	0.89	-0.2
1,952,623	+		Sama_1598	0.89	+0.4
1,952,623	+		Sama_1598	0.89	+0.8
1,952,624	-		Sama_1598	0.89	-0.6
1,952,624	-		Sama_1598	0.89	-1.5
1,952,796	+				-1.8
1,952,823	-				-0.4
1,952,937	+		Sama_1599	0.23	+0.6
1,952,970	+		Sama_1599	0.28	-1.2
1,952,975	+		Sama_1599	0.29	-0.0
1,952,975	+		Sama_1599	0.29	+0.1
1,952,976	-		Sama_1599	0.29	+0.3
1,952,978	-		Sama_1599	0.30	-0.8
1,953,072	-		Sama_1599	0.46	+0.3
1,953,110	+		Sama_1599	0.53	+0.1
1,953,154	+		Sama_1599	0.60	-1.5
1,953,154	+		Sama_1599	0.60	+1.6
1,953,154	+		Sama_1599	0.60	-0.2
1,953,155	-		Sama_1599	0.61	-1.9
1,953,155	-		Sama_1599	0.61	+0.3
1,953,155	-		Sama_1599	0.61	-0.4
1,953,231	-		Sama_1599	0.74	-0.2
1,953,245	+		Sama_1599	0.76	-1.1
1,953,245	+		Sama_1599	0.76	-1.2
1,953,250	+		Sama_1599	0.77	+0.1
1,953,250	+		Sama_1599	0.77	-0.7
1,953,250	+		Sama_1599	0.77	-0.1
1,953,250	+		Sama_1599	0.77	-0.4
1,953,250	+		Sama_1599	0.77	+1.1
1,953,251	-		Sama_1599	0.77	-0.9
1,953,251	-		Sama_1599	0.77	-0.2
1,953,251	-		Sama_1599	0.77	-0.5
1,953,280	+		Sama_1599	0.82	-0.1
1,953,280	+		Sama_1599	0.82	-1.7
1,953,281	-		Sama_1599	0.83	-0.4
1,953,284	+		Sama_1599	0.83	-2.6
1,953,284	+		Sama_1599	0.83	-1.3
1,953,284	+		Sama_1599	0.83	+0.3
1,953,361	-				+0.9
1,953,362	+				+2.1
1,953,362	+				-0.7
1,953,501	+				-0.4
1,953,502	-				-0.6
1,953,529	+				-2.1
1,953,530	-				+0.1
1,953,530	-				-1.5
1,953,539	-				+0.3
1,953,590	+				+1.1
1,953,591	-				+0.6
1,953,603	-				+0.6
1,953,611	-				+0.1
1,953,631	-				-0.5
1,953,635	+				+1.5
1,953,635	+				+0.8
1,953,636	-				-1.2
1,953,636	-				+1.6
1,953,636	-				+0.3
1,953,742	-				-2.5
1,953,748	+				-0.7
1,953,749	-				+1.3
1,953,756	+				-0.4
1,953,766	+				-2.0
1,953,766	+				-0.2
1,953,766	+				-1.1
1,953,794	-				-0.2
1,953,812	+				-1.8
1,953,813	-				-0.9
1,953,813	-				+0.3
1,953,813	-				-0.5
1,953,937	+				-1.2
1,953,938	-				-0.0
1,953,938	-				+0.3
1,953,978	-				+1.1
1,954,065	-				-0.9
1,954,068	-				-0.6
1,954,068	-				-0.4
1,954,068	-				+0.3
1,954,069	+				-0.7
1,954,106	-				+1.4
1,954,106	-				-2.2