Strain Fitness in Shewanella amazonensis SB2B around Sama_1577

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,919,113	+				+0.7
1,919,164	+				-2.2
1,919,253	+		Sama_1576	0.17	+0.9
1,919,253	+		Sama_1576	0.17	-1.4
1,919,328	+		Sama_1576	0.25	-0.3
1,919,328	+		Sama_1576	0.25	-0.1
1,919,328	+		Sama_1576	0.25	-0.1
1,919,329	-		Sama_1576	0.25	+0.2
1,919,329	-		Sama_1576	0.25	-1.9
1,919,355	+		Sama_1576	0.28	+0.7
1,919,355	+		Sama_1576	0.28	+0.3
1,919,376	+		Sama_1576	0.31	-1.3
1,919,376	+		Sama_1576	0.31	-0.5
1,919,376	+		Sama_1576	0.31	-0.1
1,919,416	+		Sama_1576	0.35	-0.2
1,919,446	-		Sama_1576	0.38	-0.9
1,919,493	+		Sama_1576	0.43	-1.2
1,919,493	+		Sama_1576	0.43	+0.5
1,919,541	-		Sama_1576	0.48	-0.4
1,919,541	-		Sama_1576	0.48	-0.1
1,919,634	+		Sama_1576	0.58	-1.1
1,919,634	+		Sama_1576	0.58	+0.1
1,919,669	+		Sama_1576	0.62	-0.6
1,919,670	-		Sama_1576	0.62	-1.9
1,919,709	+		Sama_1576	0.67	-0.1
1,919,735	-		Sama_1576	0.69	-0.1
1,919,785	-		Sama_1576	0.75	+0.3
1,919,859	+		Sama_1576	0.83	+0.1
1,919,859	+		Sama_1576	0.83	-0.1
1,919,859	+		Sama_1576	0.83	-1.9
1,919,859	+		Sama_1576	0.83	-0.5
1,919,881	+		Sama_1576	0.85	-1.8
1,920,115	+				-0.7
1,920,116	-				-1.5
1,920,116	-				-0.5
1,920,116	-				-0.8
1,920,116	-				+0.3
1,920,116	-				-1.8
1,920,145	+		Sama_1577	0.19	+0.1
1,920,146	-		Sama_1577	0.20	-0.7
1,920,200	-		Sama_1577	0.49	-0.3
1,920,218	-		Sama_1577	0.59	-2.3
1,920,277	-				-1.1
1,920,298	-				-0.5
1,920,316	-				-0.5
1,920,333	-				-0.3
1,920,333	-				+0.7
1,920,343	+				+0.7
1,920,350	-				+0.7
1,920,397	-				-0.9
1,920,418	+				+0.9
1,920,482	+				-1.9
1,920,483	-				+0.4
1,920,483	-				+2.7
1,920,483	-				+0.7
1,920,517	-				+0.7
1,920,517	-				-0.5
1,920,530	+				+0.1
1,920,535	-				-0.5
1,920,616	+				+0.1
1,920,619	+				-0.6
1,920,619	+				+1.9
1,920,620	-				-0.1
1,920,620	-				-0.0
1,920,652	+				+0.3
1,920,652	+				-0.5
1,920,653	-				-0.2
1,920,653	-				+0.5
1,920,666	-				-0.7
1,920,735	-				-0.3
1,920,751	+				-0.1
1,920,751	+				-0.8
1,920,765	+				-0.7
1,920,765	+				+0.1
1,920,797	+				+2.7
1,920,950	+		Sama_1578	0.19	+3.2
1,920,950	+		Sama_1578	0.19	-0.2
1,921,085	-		Sama_1578	0.27	-1.7
1,921,139	-		Sama_1578	0.30	-1.7
1,921,212	+		Sama_1578	0.35	+1.2
1,921,212	+		Sama_1578	0.35	-0.9
1,921,212	+		Sama_1578	0.35	+0.3
1,921,212	+		Sama_1578	0.35	+0.2
1,921,213	-		Sama_1578	0.35	+0.3
1,921,213	-		Sama_1578	0.35	+1.3
1,921,213	-		Sama_1578	0.35	-0.9
1,921,222	+		Sama_1578	0.35	-1.7
1,921,222	+		Sama_1578	0.35	-0.7
1,921,248	+		Sama_1578	0.37	+0.2
1,921,248	+		Sama_1578	0.37	+0.1
1,921,248	+		Sama_1578	0.37	-1.7
1,921,248	+		Sama_1578	0.37	-1.5
1,921,249	-		Sama_1578	0.37	-0.9
1,921,258	+		Sama_1578	0.38	+2.0
1,921,258	+		Sama_1578	0.38	-0.3
1,921,259	-		Sama_1578	0.38	+1.7
1,921,279	+		Sama_1578	0.39	-0.1