Strain Fitness in Shewanella amazonensis SB2B around Sama_1555

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,894,127	+				-0.2
1,894,127	+				-0.5
1,894,267	+				-0.2
1,894,822	-				-0.1
1,894,822	-				+0.4
1,894,857	-				+1.1
1,894,937	+				+1.1
1,894,938	-				+0.0
1,894,972	+				-0.6
1,894,992	+				+1.7
1,895,001	+				+2.0
1,895,001	+				+1.7
1,895,002	-				+1.7
1,895,085	+				+1.4
1,895,085	+				+0.1
1,895,085	+				+0.4
1,895,086	-				-1.4
1,895,086	-				-1.0
1,895,094	+				+1.4
1,895,094	+				-1.3
1,895,094	+				+1.1
1,895,094	+				-0.1
1,895,095	-				-0.8
1,895,095	-				+1.4
1,895,166	+				+0.2
1,895,166	+				-1.2
1,895,167	-				-0.8
1,895,167	-				+0.4
1,895,214	+		Sama_1555	0.12	-0.1
1,895,215	-		Sama_1555	0.13	+0.4
1,895,222	-		Sama_1555	0.13	+0.1
1,895,289	+		Sama_1555	0.17	-0.3
1,895,290	-		Sama_1555	0.17	-0.1
1,895,868	+		Sama_1555	0.49	-0.8
1,895,869	-		Sama_1555	0.49	-0.5
1,895,912	+		Sama_1555	0.52	-0.8
1,895,977	+		Sama_1555	0.55	-1.1
1,895,978	-		Sama_1555	0.55	-0.6
1,896,851	-				+0.7
1,896,964	-		Sama_1556	0.51	-0.1
1,897,052	-				-0.9
1,897,052	-				-1.2
1,897,065	-				-1.3
1,897,110	-				+1.2
1,897,110	-				-1.4
1,897,110	-				+0.1
1,897,110	-				-0.3
1,897,112	-				-0.5
1,897,112	-				-0.1
1,897,112	-				-0.1
1,897,112	-				-0.1
1,897,137	+				+0.1
1,897,138	-				+0.5
1,897,138	-				-1.5
1,897,147	+				-0.8
1,897,147	+				-0.5
1,897,286	+		Sama_1557	0.13	+0.9
1,897,286	+		Sama_1557	0.13	+0.1
1,897,287	-		Sama_1557	0.14	+0.7
1,897,287	-		Sama_1557	0.14	-1.5
1,897,379	+		Sama_1557	0.22	-1.0
1,897,379	+		Sama_1557	0.22	+1.3
1,897,380	-		Sama_1557	0.23	+0.7
1,897,455	-		Sama_1557	0.30	+0.9
1,897,455	-		Sama_1557	0.30	+1.1
1,897,455	-		Sama_1557	0.30	+0.4
1,897,493	+		Sama_1557	0.34	+0.9
1,897,493	+		Sama_1557	0.34	+0.4
1,897,493	+		Sama_1557	0.34	+1.0
1,897,494	-		Sama_1557	0.34	+0.1
1,897,494	-		Sama_1557	0.34	+0.7
1,897,494	-		Sama_1557	0.34	+0.1
1,897,502	-		Sama_1557	0.34	-0.1
1,897,514	+		Sama_1557	0.36	-0.4
1,897,515	-		Sama_1557	0.36	-0.4
1,897,515	-		Sama_1557	0.36	+1.7
1,897,663	+		Sama_1557	0.50	-1.0
1,897,663	+		Sama_1557	0.50	+0.5
1,897,664	-		Sama_1557	0.50	+0.2
1,897,667	+		Sama_1557	0.50	-0.1
1,897,667	+		Sama_1557	0.50	+0.5
1,897,667	+		Sama_1557	0.50	+0.7
1,897,667	+		Sama_1557	0.50	-1.2
1,897,667	+		Sama_1557	0.50	-0.8
1,897,668	-		Sama_1557	0.51	+1.4
1,897,668	-		Sama_1557	0.51	-0.9
1,897,747	+		Sama_1557	0.58	+0.2
1,897,747	+		Sama_1557	0.58	+0.1
1,897,747	+		Sama_1557	0.58	+0.7