Strain Fitness in Shewanella amazonensis SB2B around Sama_1430

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,741,406	+	sucC	Sama_1429	0.65	+12.1
1,741,406	+	sucC	Sama_1429	0.65	+8.2
1,741,817	+				+9.9
1,741,817	+				-1.1
1,742,099	+		Sama_1430	0.32	+8.4
1,742,100	-		Sama_1430	0.32	+10.4
1,742,100	-		Sama_1430	0.32	+6.8
1,742,689	+				+4.8
1,742,740	+				-0.3
1,742,741	-				-0.1
1,742,741	-				+0.1
1,742,742	+				-1.1
1,742,742	+				-0.7
1,742,742	+				+0.7
1,742,742	+				-1.1
1,742,742	+				+0.4
1,742,742	+				+0.1
1,742,743	-				+0.8
1,742,743	-				-0.3
1,742,743	-				+0.1
1,742,743	-				-2.1
1,742,743	-				+0.7
1,742,743	-				+1.4
1,742,743	-				-0.7
1,742,748	+				-0.1
1,742,748	+				-0.9
1,742,748	+				-0.5
1,742,748	+				-1.0
1,742,748	+				-0.1
1,742,748	+				+0.4
1,742,748	+				+1.7
1,742,748	+				-0.9
1,742,748	+				-0.1
1,742,748	+				+1.1
1,742,748	+				-2.1
1,742,748	+				-1.4
1,742,748	+				-1.1
1,742,748	+				-1.1
1,742,749	-				+0.7
1,742,749	-				+0.4
1,742,749	-				-0.3
1,742,749	-				-1.1
1,742,749	-				-1.0
1,742,749	-				-0.7
1,742,749	-				-0.1
1,742,749	-				+1.1
1,742,749	-				+0.0
1,742,749	-				-0.5
1,742,749	-				+0.1
1,742,749	-				+0.7
1,742,749	-				-0.6
1,742,749	-				-1.5
1,742,749	-				+0.1
1,742,752	+				-0.5
1,742,752	+				-0.6
1,742,752	+				+0.5
1,742,753	-				+1.1
1,742,753	-				+0.3
1,742,753	-				-0.1
1,742,753	-				+1.1
1,742,753	-				-0.0
1,742,753	-				-1.9
1,742,754	+				+0.4
1,742,754	+				-0.7
1,742,755	-				-0.9
1,742,755	-				-0.5
1,742,755	-				+0.4
1,742,755	-				-0.5
1,742,755	-				-0.5
1,742,755	-				+2.0
1,742,761	-				-0.9
1,742,761	-				+0.1
1,742,761	-				+0.4
1,742,761	-				+2.3
1,742,761	-				-0.9
1,742,764	+				-0.9
1,742,764	+				+1.7
1,742,765	-				+0.7
1,742,766	+				+1.3
1,742,766	+				+0.5
1,742,766	+				-0.7
1,742,766	+				-0.3
1,742,766	+				+0.6
1,742,767	-				+1.6
1,742,767	-				+0.2
1,742,767	-				-0.7
1,742,767	-				-1.2
1,742,767	-				+0.7
1,742,767	-				-1.1
1,742,767	-				+0.1
1,742,770	+				-1.0
1,742,770	+				-1.7
1,742,770	+				-0.4
1,742,770	+				+0.7
1,742,770	+				+1.0
1,742,770	+				+0.1
1,742,770	+				+0.9
1,742,770	+				-2.2
1,742,770	+				-0.6
1,742,770	+				+0.1
1,742,770	+				-0.7
1,742,771	-				-0.5
1,742,771	-				+0.1
1,742,771	-				-0.3
1,742,771	-				+2.7
1,742,771	-				+0.5
1,742,771	-				-1.0
1,742,771	-				-1.1
1,742,771	-				-0.5
1,742,771	-				+1.0
1,742,771	-				-1.2
1,742,771	-				+0.5
1,742,791	-				-1.5
1,742,791	-				-0.3
1,742,835	+				+0.1
1,742,851	+				-0.3
1,742,852	-				-0.2
1,742,901	-		Sama_1431	0.11	-0.6
1,742,917	+		Sama_1431	0.13	-1.0
1,742,917	+		Sama_1431	0.13	-0.2
1,742,918	-		Sama_1431	0.13	-0.1
1,742,925	+		Sama_1431	0.14	+1.1
1,742,926	-		Sama_1431	0.14	+0.7
1,742,926	-		Sama_1431	0.14	-0.5
1,742,960	+		Sama_1431	0.17	-0.3
1,742,967	+		Sama_1431	0.18	-0.6
1,742,968	-		Sama_1431	0.18	+0.5
1,742,977	-		Sama_1431	0.19	-0.4
1,743,004	+		Sama_1431	0.22	+0.7
1,743,006	+		Sama_1431	0.22	+1.1
1,743,033	+		Sama_1431	0.25	-0.0
1,743,034	-		Sama_1431	0.25	-1.3
1,743,060	+		Sama_1431	0.28	-0.9
1,743,183	-		Sama_1431	0.42	+0.2
1,743,237	+		Sama_1431	0.48	+0.7
1,743,240	+		Sama_1431	0.48	-0.2
1,743,241	-		Sama_1431	0.48	-0.6
1,743,241	-		Sama_1431	0.48	-1.4
1,743,276	+		Sama_1431	0.52	-0.3
1,743,277	-		Sama_1431	0.52	+2.3
1,743,277	-		Sama_1431	0.52	-0.3
1,743,479	+		Sama_1431	0.74	-0.2
1,743,489	+		Sama_1431	0.75	+0.4
1,743,489	+		Sama_1431	0.75	-1.3
1,743,489	+		Sama_1431	0.75	-1.1
1,743,490	-		Sama_1431	0.75	-0.5
1,743,490	-		Sama_1431	0.75	-0.7
1,743,490	-		Sama_1431	0.75	+1.3
1,743,495	+		Sama_1431	0.76	-1.1
1,743,495	+		Sama_1431	0.76	-1.3
1,743,496	-		Sama_1431	0.76	+2.7
1,743,496	-		Sama_1431	0.76	-1.7
1,743,496	-		Sama_1431	0.76	-0.1
1,743,513	+		Sama_1431	0.78	-1.1
1,743,543	+		Sama_1431	0.81	+0.5
1,743,544	-		Sama_1431	0.81	-1.9
1,743,569	+		Sama_1431	0.84	-2.1
1,743,570	-		Sama_1431	0.84	-0.6
1,743,570	-		Sama_1431	0.84	-0.3