Strain Fitness in Shewanella amazonensis SB2B around Sama_1407

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,707,936	+				-0.5
1,707,936	+				-0.9
1,707,937	-				-0.3
1,707,937	-				-0.6
1,707,937	-				+0.2
1,708,078	+		Sama_1406	0.21	-1.7
1,708,078	+		Sama_1406	0.21	+0.4
1,708,198	+		Sama_1406	0.34	-0.5
1,708,198	+		Sama_1406	0.34	+0.5
1,708,222	+		Sama_1406	0.37	+0.1
1,708,222	+		Sama_1406	0.37	-1.0
1,708,235	+		Sama_1406	0.38	-0.8
1,708,235	+		Sama_1406	0.38	-0.9
1,708,235	+		Sama_1406	0.38	-1.3
1,708,236	-		Sama_1406	0.38	+0.1
1,708,236	-		Sama_1406	0.38	+0.4
1,708,236	-		Sama_1406	0.38	-2.1
1,708,237	+		Sama_1406	0.38	-0.8
1,708,238	-		Sama_1406	0.38	-0.3
1,708,292	-		Sama_1406	0.44	-1.3
1,708,328	+		Sama_1406	0.48	+1.1
1,708,329	-		Sama_1406	0.48	+0.7
1,708,411	+		Sama_1406	0.57	-1.0
1,708,411	+		Sama_1406	0.57	+0.4
1,708,411	+		Sama_1406	0.57	+0.7
1,708,411	+		Sama_1406	0.57	+0.8
1,708,411	+		Sama_1406	0.57	-1.3
1,708,411	+		Sama_1406	0.57	-0.6
1,708,412	-		Sama_1406	0.57	-0.5
1,708,412	-		Sama_1406	0.57	-0.2
1,708,412	-		Sama_1406	0.57	+1.7
1,708,412	-		Sama_1406	0.57	+1.5
1,708,412	-		Sama_1406	0.57	-1.8
1,708,412	-		Sama_1406	0.57	-0.8
1,708,412	-		Sama_1406	0.57	-0.6
1,708,412	-		Sama_1406	0.57	-0.1
1,708,413	+		Sama_1406	0.57	-1.5
1,708,413	+		Sama_1406	0.57	-0.3
1,708,413	+		Sama_1406	0.57	-0.5
1,708,413	+		Sama_1406	0.57	-0.4
1,708,413	+		Sama_1406	0.57	-1.1
1,708,413	+		Sama_1406	0.57	+0.1
1,708,414	-		Sama_1406	0.57	-0.8
1,708,414	-		Sama_1406	0.57	+0.2
1,708,430	+		Sama_1406	0.59	-2.5
1,708,576	+		Sama_1406	0.74	-0.8
1,708,576	+		Sama_1406	0.74	+3.1
1,708,576	+		Sama_1406	0.74	-0.2
1,708,576	+		Sama_1406	0.74	-0.5
1,708,576	+		Sama_1406	0.74	-0.9
1,708,595	+		Sama_1406	0.76	+0.2
1,708,595	+		Sama_1406	0.76	+0.7
1,708,596	-		Sama_1406	0.76	+1.7
1,708,596	-		Sama_1406	0.76	+1.1
1,708,597	+		Sama_1406	0.77	-0.1
1,708,598	-		Sama_1406	0.77	-0.4
1,708,668	+		Sama_1406	0.84	-1.1
1,708,669	-		Sama_1406	0.84	-0.8
1,708,669	-		Sama_1406	0.84	-1.5
1,708,770	+				-1.2
1,708,771	-				-0.9
1,708,771	-				-0.7
1,708,771	-				-0.1
1,708,771	-				+0.6
1,708,781	+				-1.9
1,708,781	+				+0.7
1,708,814	+				+0.7
1,708,815	-				-0.5
1,708,815	-				+1.5
1,708,988	-		Sama_1407	0.33	-0.6
1,708,991	-		Sama_1407	0.34	+0.7
1,709,019	-		Sama_1407	0.39	+0.4
1,709,061	+		Sama_1407	0.48	-1.1
1,709,062	-		Sama_1407	0.48	-1.8
1,709,184	-		Sama_1407	0.72	-1.0
1,709,184	-		Sama_1407	0.72	-1.5
1,709,313	+				-1.2
1,709,314	-				-1.5
1,709,348	+				-0.1
1,709,348	+				-1.2
1,709,355	+				+0.2
1,709,356	-				+1.4
1,709,395	+				+0.1
1,709,395	+				+0.7
1,709,395	+				+0.0
1,709,395	+				-0.5
1,709,395	+				+0.7
1,709,395	+				-0.8
1,709,395	+				+0.4
1,709,396	-				+1.6
1,709,396	-				+0.9
1,709,396	-				-1.3
1,709,396	-				+0.5
1,709,418	-				+9.1
1,709,429	-				+0.7
1,709,430	+				+0.0
1,709,430	+				-0.9
1,709,467	+				-0.5
1,709,467	+				+0.1
1,709,474	+				+2.7
1,709,579	+				-0.1