Strain Fitness in Shewanella amazonensis SB2B around Sama_1283

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,572,102	-		Sama_1282	0.50	+0.5
1,572,102	-		Sama_1282	0.50	+0.8
1,572,102	-		Sama_1282	0.50	+0.5
1,572,118	+		Sama_1282	0.51	-0.9
1,572,159	-		Sama_1282	0.54	+0.3
1,572,160	+		Sama_1282	0.54	-1.3
1,572,160	+		Sama_1282	0.54	-0.7
1,572,160	+		Sama_1282	0.54	-0.4
1,572,160	+		Sama_1282	0.54	-2.2
1,572,160	+		Sama_1282	0.54	-0.0
1,572,160	+		Sama_1282	0.54	+0.1
1,572,160	+		Sama_1282	0.54	+0.2
1,572,160	+		Sama_1282	0.54	-0.9
1,572,161	-		Sama_1282	0.54	-1.3
1,572,161	-		Sama_1282	0.54	-0.0
1,572,161	-		Sama_1282	0.54	+1.5
1,572,178	+		Sama_1282	0.55	-2.0
1,572,185	-		Sama_1282	0.55	-0.0
1,572,280	+		Sama_1282	0.61	+0.4
1,572,355	+		Sama_1282	0.65	-0.2
1,572,355	+		Sama_1282	0.65	+0.1
1,572,356	-		Sama_1282	0.65	+0.2
1,572,391	+		Sama_1282	0.67	-1.8
1,572,392	-		Sama_1282	0.67	+0.8
1,572,468	+		Sama_1282	0.72	+2.8
1,572,468	+		Sama_1282	0.72	-0.5
1,572,468	+		Sama_1282	0.72	-0.0
1,572,469	-		Sama_1282	0.72	-0.2
1,572,488	+		Sama_1282	0.73	-0.1
1,572,488	+		Sama_1282	0.73	-0.0
1,572,488	+		Sama_1282	0.73	+0.6
1,572,488	+		Sama_1282	0.73	-0.0
1,572,516	+		Sama_1282	0.74	+0.3
1,572,517	-		Sama_1282	0.75	-0.0
1,572,523	+		Sama_1282	0.75	-0.1
1,572,523	+		Sama_1282	0.75	-0.3
1,572,523	+		Sama_1282	0.75	-0.4
1,572,524	-		Sama_1282	0.75	-0.1
1,572,524	-		Sama_1282	0.75	+0.2
1,572,592	+		Sama_1282	0.79	-0.0
1,572,593	-		Sama_1282	0.79	-1.6
1,572,661	+		Sama_1282	0.83	+1.0
1,572,661	+		Sama_1282	0.83	-1.8
1,572,661	+		Sama_1282	0.83	+1.9
1,572,661	+		Sama_1282	0.83	-0.9
1,572,661	+		Sama_1282	0.83	+0.4
1,572,661	+		Sama_1282	0.83	+0.8
1,572,661	+		Sama_1282	0.83	-0.5
1,572,661	+		Sama_1282	0.83	+0.8
1,572,662	-		Sama_1282	0.83	-0.4
1,572,662	-		Sama_1282	0.83	-0.7
1,572,662	-		Sama_1282	0.83	-1.9
1,572,662	-		Sama_1282	0.83	-0.9
1,572,662	-		Sama_1282	0.83	-0.8
1,572,663	+		Sama_1282	0.83	-1.0
1,572,663	+		Sama_1282	0.83	+0.2
1,572,663	+		Sama_1282	0.83	-0.8
1,572,663	+		Sama_1282	0.83	+1.8
1,572,663	+		Sama_1282	0.83	-0.7
1,572,664	-		Sama_1282	0.83	-0.8
1,572,664	-		Sama_1282	0.83	-1.4
1,572,664	-		Sama_1282	0.83	-0.0
1,572,664	-		Sama_1282	0.83	+0.8
1,572,664	-		Sama_1282	0.83	+0.8
1,572,732	-		Sama_1282	0.87	+0.5
1,572,786	+				+0.2
1,572,797	-				+2.5
1,572,817	+				-0.2
1,572,817	+				-0.0
1,572,822	+				+2.8
1,572,822	+				-0.3
1,572,822	+				-0.5
1,572,822	+				-0.4
1,572,822	+				-1.2
1,572,822	+				+1.0
1,572,822	+				+0.1
1,572,822	+				-0.0
1,572,822	+				+0.8
1,572,822	+				-1.2
1,572,822	+				-1.5
1,572,823	-				-1.1
1,572,823	-				+1.2
1,572,823	-				+0.5
1,572,823	-				+1.1
1,572,823	-				+0.5
1,572,823	-				-0.8
1,572,912	+				+1.2
1,572,912	+				-1.5
1,572,912	+				-1.2
1,572,913	-				+1.8
1,572,973	+				-0.7
1,572,976	+				+1.5
1,572,977	-				+0.2
1,573,024	+				+0.8
1,573,025	-				-1.5
1,573,025	-				+1.1
1,573,025	-				-0.5
1,573,058	+				-0.0
1,573,058	+				+0.6
1,573,058	+				-0.8
1,573,058	+				+0.2
1,573,058	+				-0.8
1,573,059	-				-1.0
1,573,059	-				-1.3
1,573,059	-				-2.9
1,573,059	-				-0.3
1,573,124	+		Sama_1283	0.18	+1.3
1,573,125	-		Sama_1283	0.18	-1.5
1,573,223	+		Sama_1283	0.58	+0.3
1,573,238	+		Sama_1283	0.65	-0.1
1,573,238	+		Sama_1283	0.65	+0.3
1,573,239	-		Sama_1283	0.65	+0.9
1,573,239	-		Sama_1283	0.65	+0.8
1,573,242	-		Sama_1283	0.66	-1.4
1,573,321	+				+0.9
1,573,321	+				-0.7
1,573,321	+				-1.5
1,573,321	+				-0.7
1,573,321	+				-0.5
1,573,322	-				-0.0
1,573,322	-				+1.2
1,573,322	-				-1.0
1,573,322	-				+0.5
1,573,322	-				+0.6
1,573,385	-		Sama_1284	0.19	-1.5
1,573,398	-		Sama_1284	0.22	-1.3
1,573,455	-		Sama_1284	0.39	+0.6
1,573,475	+		Sama_1284	0.45	-0.0
1,573,476	-		Sama_1284	0.45	+0.5
1,573,493	-		Sama_1284	0.50	-2.1
1,573,512	-		Sama_1284	0.55	-1.9
1,573,563	-		Sama_1284	0.70	+0.3
1,573,563	-		Sama_1284	0.70	+2.0
1,573,563	-		Sama_1284	0.70	+1.1
1,573,579	+		Sama_1284	0.74	+0.8
1,573,580	-		Sama_1284	0.75	+0.2
1,573,580	-		Sama_1284	0.75	+0.2
1,573,643	+				-0.2
1,573,643	+				-1.5
1,573,651	-				+0.5
1,573,651	-				+1.8
1,573,660	-				-1.0
1,573,784	+		Sama_1285	0.19	+0.1
1,573,784	+		Sama_1285	0.19	-0.7
1,573,784	+		Sama_1285	0.19	+1.8
1,573,785	-		Sama_1285	0.20	+0.7
1,573,785	-		Sama_1285	0.20	+1.0
1,573,836	+		Sama_1285	0.27	-0.5
1,573,836	+		Sama_1285	0.27	+0.4
1,573,836	+		Sama_1285	0.27	+1.2
1,573,836	+		Sama_1285	0.27	-0.8
1,573,837	-		Sama_1285	0.27	+0.2
1,573,837	-		Sama_1285	0.27	-1.1
1,573,837	-		Sama_1285	0.27	+1.0
1,573,935	+		Sama_1285	0.42	-0.7
1,573,935	+		Sama_1285	0.42	-0.7
1,573,935	+		Sama_1285	0.42	+0.6
1,573,936	-		Sama_1285	0.42	+0.9
1,573,942	-		Sama_1285	0.43	+0.3
1,573,942	-		Sama_1285	0.43	-2.3
1,574,012	+		Sama_1285	0.54	+1.4
1,574,012	+		Sama_1285	0.54	+1.2
1,574,012	+		Sama_1285	0.54	+0.5
1,574,013	-		Sama_1285	0.54	+0.5
1,574,013	-		Sama_1285	0.54	-1.1
1,574,127	-		Sama_1285	0.71	-1.3
1,574,127	-		Sama_1285	0.71	-0.1
1,574,250	+		Sama_1285	0.89	-0.6
1,574,251	-		Sama_1285	0.89	-0.1
1,574,251	-		Sama_1285	0.89	+0.5
1,574,262	+				-0.0
1,574,322	+				+1.2