Strain Fitness in Shewanella amazonensis SB2B around Sama_1036
Experiment: Fusidic 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,254,890 | + | -0.4 | |||
1,254,890 | + | -0.2 | |||
1,254,963 | + | +0.5 | |||
1,254,964 | - | +2.0 | |||
1,255,000 | + | +0.4 | |||
1,255,042 | + | +0.3 | |||
1,255,057 | + | -0.7 | |||
1,255,085 | + | +0.9 | |||
1,255,085 | + | -2.7 | |||
1,256,415 | + | +0.6 | |||
1,256,423 | - | -1.1 | |||
1,256,432 | + | -0.7 | |||
1,256,446 | + | -1.4 | |||
1,256,447 | - | +1.3 | |||
1,256,448 | + | -1.0 | |||
1,256,448 | + | -1.4 | |||
1,256,448 | + | -1.2 | |||
1,256,448 | + | -0.1 | |||
1,256,448 | + | -0.6 | |||
1,256,449 | - | +0.5 | |||
1,256,449 | - | -0.1 | |||
1,256,449 | - | +0.9 | |||
1,256,484 | + | -1.4 | |||
1,256,485 | - | -1.0 |
Or see this region's nucleotide sequence