Strain Fitness in Shewanella amazonensis SB2B around Sama_0110

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
122,578	+		Sama_0109	0.37	-0.3
122,633	+		Sama_0109	0.41	+1.4
122,633	+		Sama_0109	0.41	+0.4
122,633	+		Sama_0109	0.41	+3.0
122,633	+		Sama_0109	0.41	+3.0
122,634	-		Sama_0109	0.41	+2.4
122,634	-		Sama_0109	0.41	+4.5
122,634	-		Sama_0109	0.41	+2.7
122,634	-		Sama_0109	0.41	+4.4
122,634	-		Sama_0109	0.41	+3.4
122,634	-		Sama_0109	0.41	+3.0
122,634	-		Sama_0109	0.41	+3.5
122,634	-		Sama_0109	0.41	+3.3
122,635	+		Sama_0109	0.41	+2.8
122,635	+		Sama_0109	0.41	+2.2
122,635	+		Sama_0109	0.41	+2.2
122,635	+		Sama_0109	0.41	+4.4
122,635	+		Sama_0109	0.41	+4.1
122,636	-		Sama_0109	0.41	+1.8
122,636	-		Sama_0109	0.41	+2.9
122,636	-		Sama_0109	0.41	+1.9
122,692	-		Sama_0109	0.46	+3.2
122,715	+		Sama_0109	0.48	+3.2
122,715	+		Sama_0109	0.48	+2.2
122,715	+		Sama_0109	0.48	+2.3
122,715	+		Sama_0109	0.48	+2.2
122,715	+		Sama_0109	0.48	+2.0
122,716	-		Sama_0109	0.48	+2.5
122,716	-		Sama_0109	0.48	+4.2
122,716	-		Sama_0109	0.48	+3.0
122,716	-		Sama_0109	0.48	+4.0
122,716	-		Sama_0109	0.48	+3.1
122,716	-		Sama_0109	0.48	+2.8
122,718	+		Sama_0109	0.48	+2.7
122,718	+		Sama_0109	0.48	+2.3
122,718	+		Sama_0109	0.48	+2.2
122,719	-		Sama_0109	0.48	+1.4
122,719	-		Sama_0109	0.48	+1.7
122,719	-		Sama_0109	0.48	+2.9
122,719	-		Sama_0109	0.48	+4.4
122,719	-		Sama_0109	0.48	+1.8
122,719	-		Sama_0109	0.48	+3.5
122,785	+		Sama_0109	0.54	+2.2
122,785	+		Sama_0109	0.54	+2.4
122,785	+		Sama_0109	0.54	+2.6
122,786	-		Sama_0109	0.54	+2.5
122,786	-		Sama_0109	0.54	+2.6
122,786	-		Sama_0109	0.54	+3.0
122,798	+		Sama_0109	0.55	+2.0
122,798	+		Sama_0109	0.55	+0.7
122,798	+		Sama_0109	0.55	+2.4
122,798	+		Sama_0109	0.55	+0.2
122,799	-		Sama_0109	0.55	+2.4
122,799	-		Sama_0109	0.55	+2.3
122,799	-		Sama_0109	0.55	+1.7
122,799	-		Sama_0109	0.55	+3.0
122,808	+		Sama_0109	0.56	+1.2
122,808	+		Sama_0109	0.56	+0.2
122,809	-		Sama_0109	0.56	+4.2
122,809	-		Sama_0109	0.56	+4.2
122,809	-		Sama_0109	0.56	+2.3
122,816	-		Sama_0109	0.56	+2.3
122,816	-		Sama_0109	0.56	+2.9
122,816	-		Sama_0109	0.56	+2.9
122,816	-		Sama_0109	0.56	+2.7
122,865	+		Sama_0109	0.60	+2.5
122,865	+		Sama_0109	0.60	+1.3
122,865	+		Sama_0109	0.60	+3.4
122,865	+		Sama_0109	0.60	+1.9
122,865	+		Sama_0109	0.60	+1.3
122,865	+		Sama_0109	0.60	+0.9
122,865	+		Sama_0109	0.60	+1.7
122,866	-		Sama_0109	0.60	+2.7
122,866	-		Sama_0109	0.60	+3.8
122,866	-		Sama_0109	0.60	+3.2
122,885	-		Sama_0109	0.62	+2.4
122,902	+		Sama_0109	0.63	+1.9
122,920	+		Sama_0109	0.65	+1.1
122,920	+		Sama_0109	0.65	+0.1
122,920	+		Sama_0109	0.65	+1.4
122,968	+		Sama_0109	0.69	+2.7
122,968	+		Sama_0109	0.69	+1.1
122,968	+		Sama_0109	0.69	+2.1
122,969	-		Sama_0109	0.69	+3.0
123,041	-		Sama_0109	0.75	+3.2
123,041	-		Sama_0109	0.75	+1.8
123,041	-		Sama_0109	0.75	+2.2
123,079	+		Sama_0109	0.78	+2.6
123,079	+		Sama_0109	0.78	+3.2
123,079	+		Sama_0109	0.78	+1.4
123,080	-		Sama_0109	0.78	+2.0
123,080	-		Sama_0109	0.78	+2.0
123,080	-		Sama_0109	0.78	+3.9
123,080	-		Sama_0109	0.78	+2.8
123,139	+		Sama_0109	0.83	+1.9
123,139	+		Sama_0109	0.83	+1.9
123,139	+		Sama_0109	0.83	+2.7
123,139	+		Sama_0109	0.83	+1.9
123,139	+		Sama_0109	0.83	+3.1
123,139	+		Sama_0109	0.83	+1.9
123,140	-		Sama_0109	0.83	+2.2
123,140	-		Sama_0109	0.83	+1.5
123,140	-		Sama_0109	0.83	+3.2
123,140	-		Sama_0109	0.83	+3.0
123,140	-		Sama_0109	0.83	+3.0
123,140	-		Sama_0109	0.83	+3.7
123,140	-		Sama_0109	0.83	+3.3
123,140	-		Sama_0109	0.83	+0.9
123,140	-		Sama_0109	0.83	+2.8
123,140	-		Sama_0109	0.83	+1.7
123,140	-		Sama_0109	0.83	+3.6
123,140	-		Sama_0109	0.83	+2.6
123,140	-		Sama_0109	0.83	+2.3
123,140	-		Sama_0109	0.83	+2.9
123,140	-		Sama_0109	0.83	+3.2
123,142	-		Sama_0109	0.83	+2.9
123,142	-		Sama_0109	0.83	+3.8
123,161	+		Sama_0109	0.85	+2.3
123,161	+		Sama_0109	0.85	+2.0
123,162	-		Sama_0109	0.85	+2.9
123,275	-				+2.9
123,283	+				+2.0
123,283	+				+1.9
123,284	-				+3.8
123,284	-				+2.5
123,307	+				-0.8
123,308	-				+1.8
123,327	+				+2.8
123,327	+				+1.9
123,327	+				+3.1
123,327	+				+2.7
123,328	-				+2.3
123,328	-				+3.4
123,328	-				+3.7
123,379	+				+3.5
123,380	-				+3.2
123,380	-				+2.9
123,380	-				+1.5
123,382	+				+2.0
123,484	+				-0.4
123,484	+				-0.7
123,485	-				-0.8
123,485	-				-1.1
123,488	+				+1.6
123,488	+				+1.8
123,488	+				+2.5
123,488	+				+2.1
123,489	-				+0.5
123,563	+				-1.1
123,563	+				-0.5
123,563	+				+0.9
123,563	+				+0.4
123,563	+				-1.1
123,563	+				+1.7
123,564	-				-1.3
123,564	-				+0.1
123,564	-				+0.4
123,564	-				+1.3
123,607	+		Sama_0110	0.10	-1.0
123,630	+		Sama_0110	0.14	+4.3
123,630	+		Sama_0110	0.14	+1.1
123,630	+		Sama_0110	0.14	+8.1
123,630	+		Sama_0110	0.14	+8.4
123,630	+		Sama_0110	0.14	+8.6
123,630	+		Sama_0110	0.14	+7.2
123,630	+		Sama_0110	0.14	+1.1
123,630	+		Sama_0110	0.14	+3.0
123,630	+		Sama_0110	0.14	+3.8
123,630	+		Sama_0110	0.14	-0.1
123,630	+		Sama_0110	0.14	+5.9
123,630	+		Sama_0110	0.14	+4.8
123,630	+		Sama_0110	0.14	+2.2
123,630	+		Sama_0110	0.14	+6.0
123,630	+		Sama_0110	0.14	+7.2
123,632	+		Sama_0110	0.15	+10.9
123,632	+		Sama_0110	0.15	+6.7
123,632	+		Sama_0110	0.15	+12.2
123,632	+		Sama_0110	0.15	+9.8
123,632	+		Sama_0110	0.15	+7.6
123,632	+		Sama_0110	0.15	+9.1
123,632	+		Sama_0110	0.15	+8.1
124,093	+				+0.2
124,093	+				+1.3
124,094	-				-1.4
124,110	-				+1.5
124,124	+				+1.1
124,124	+				-0.4
124,124	+				+0.2
124,124	+				-1.6
124,124	+				-0.8
124,124	+				+1.2
124,125	-				+0.2
124,136	+				-0.3
124,143	+				+0.1
124,143	+				+0.1
124,143	+				+0.4
124,143	+				+0.1
124,143	+				+1.7
124,143	+				-0.8
124,143	+				+0.4
124,153	+				+1.7
124,153	+				+0.6