Strain Fitness in Shewanella oneidensis MR-1 around SO2137

Experiment: Uridine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (C)
2,244,304	+	adhE	SO2136	0.80	+1.2
2,244,304	+	adhE	SO2136	0.80	+0.1
2,244,304	+	adhE	SO2136	0.80	-0.6
2,244,312	-	adhE	SO2136	0.80	-0.6
2,244,440	+	adhE	SO2136	0.85	-0.2
2,244,583	+				+0.4
2,244,584	-				-0.6
2,244,779	-				-0.1
2,244,803	+				-0.4
2,244,845	-				-0.2
2,244,908	+				+0.0
2,244,913	+				+0.9
2,244,981	-				-0.1
2,244,993	+				-0.1
2,245,077	+				+0.2
2,245,077	+				-0.3
2,245,085	-				-0.6
2,245,211	-		SO2137	0.11	-1.3
2,245,211	-		SO2137	0.11	-0.2
2,245,215	+		SO2137	0.11	-1.7
2,245,259	+		SO2137	0.18	-0.8
2,245,320	+		SO2137	0.28	-1.2
2,245,446	+		SO2137	0.48	-0.7
2,245,460	+		SO2137	0.50	-1.2
2,245,467	+		SO2137	0.51	-0.7
2,245,467	+		SO2137	0.51	-1.6
2,245,475	+		SO2137	0.52	-0.5
2,245,481	+		SO2137	0.53	-1.1
2,245,490	+		SO2137	0.55	+1.4
2,245,516	+		SO2137	0.59	-0.5
2,245,516	+		SO2137	0.59	-0.8
2,245,516	+		SO2137	0.59	-1.8
2,245,516	+		SO2137	0.59	-1.1
2,245,516	+		SO2137	0.59	-0.5
2,245,516	+		SO2137	0.59	-1.1
2,245,517	+		SO2137	0.59	-0.3
2,245,521	+		SO2137	0.60	-1.1
2,245,524	-		SO2137	0.60	-0.9
2,245,524	-		SO2137	0.60	-0.0
2,245,524	-		SO2137	0.60	+0.2
2,245,524	-		SO2137	0.60	-0.7
2,245,524	-		SO2137	0.60	-0.3
2,245,524	-		SO2137	0.60	-0.7
2,245,524	-		SO2137	0.60	-0.2
2,245,524	-		SO2137	0.60	-0.3
2,245,525	-		SO2137	0.60	-0.7
2,245,539	-		SO2137	0.63	-0.5
2,245,539	-		SO2137	0.63	-0.9
2,245,544	-		SO2137	0.63	+0.3
2,245,544	-		SO2137	0.63	-0.3
2,245,544	-		SO2137	0.63	-0.2
2,245,594	-		SO2137	0.71	-0.8
2,245,618	+		SO2137	0.75	-0.6
2,245,618	+		SO2137	0.75	-2.2
2,245,626	-		SO2137	0.76	-0.9
2,245,626	-		SO2137	0.76	+0.9
2,245,626	-		SO2137	0.76	-0.8
2,245,626	-		SO2137	0.76	-0.2
2,245,628	+		SO2137	0.77	-0.8
2,245,628	+		SO2137	0.77	-0.4
2,245,628	+		SO2137	0.77	-0.7
2,245,628	+		SO2137	0.77	-2.5
2,245,628	+		SO2137	0.77	-1.0
2,245,628	+		SO2137	0.77	-0.8
2,245,628	+		SO2137	0.77	-0.0
2,245,628	+		SO2137	0.77	-0.2
2,245,628	+		SO2137	0.77	-0.7
2,245,628	+		SO2137	0.77	-0.8
2,245,628	+		SO2137	0.77	-1.4
2,245,628	+		SO2137	0.77	+0.4
2,245,628	+		SO2137	0.77	+0.0
2,245,628	+		SO2137	0.77	-0.1
2,245,628	+		SO2137	0.77	-0.9
2,245,628	+		SO2137	0.77	-0.7
2,245,628	+		SO2137	0.77	-0.6
2,245,628	+		SO2137	0.77	-3.6
2,245,628	+		SO2137	0.77	-0.2
2,245,628	+		SO2137	0.77	-1.0
2,245,628	+		SO2137	0.77	-1.0
2,245,628	+		SO2137	0.77	-0.7
2,245,628	+		SO2137	0.77	-1.2
2,245,628	+		SO2137	0.77	-1.1
2,245,628	+		SO2137	0.77	-0.5
2,245,628	+		SO2137	0.77	-0.1
2,245,628	+		SO2137	0.77	-1.1
2,245,628	+		SO2137	0.77	-0.5
2,245,636	-		SO2137	0.78	-0.4
2,245,636	-		SO2137	0.78	-0.4
2,245,636	-		SO2137	0.78	-0.2
2,245,636	-		SO2137	0.78	-0.7
2,245,636	-		SO2137	0.78	-0.3
2,245,636	-		SO2137	0.78	-0.4
2,245,636	-		SO2137	0.78	-0.4
2,245,636	-		SO2137	0.78	-1.3
2,245,636	-		SO2137	0.78	+0.8
2,245,636	-		SO2137	0.78	-0.7
2,245,636	-		SO2137	0.78	-0.3
2,245,636	-		SO2137	0.78	+0.1
2,245,636	-		SO2137	0.78	-0.7
2,245,636	-		SO2137	0.78	-0.3
2,245,636	-		SO2137	0.78	-0.7
2,245,636	-		SO2137	0.78	-0.4
2,245,636	-		SO2137	0.78	-0.4
2,245,636	-		SO2137	0.78	-0.5
2,245,636	-		SO2137	0.78	-0.6
2,245,636	-		SO2137	0.78	-1.0
2,245,636	-		SO2137	0.78	-0.4
2,245,669	-		SO2137	0.83	-0.2
2,245,681	-		SO2137	0.85	-0.4
2,245,706	-		SO2137	0.89	-1.3
2,245,728	-				+0.2
2,245,728	-				+0.1
2,245,749	+				+0.8
2,245,759	-				-0.8
2,245,778	+				-1.4
2,245,796	+				+0.0
2,245,798	+				+0.9
2,245,870	+				-0.4
2,245,901	+				-0.6
2,245,909	-				+0.1
2,245,909	-				+0.3
2,245,909	-				-0.4
2,245,909	-				+0.3
2,245,909	-				-0.5
2,245,909	-				-0.1
2,245,924	+				-0.1
2,245,932	-				-0.2
2,245,932	-				-0.0
2,246,003	-				-0.1
2,246,015	-				-0.9
2,246,015	-				+0.5
2,246,015	-				+0.6
2,246,018	+				-0.1
2,246,026	-				+1.3
2,246,029	+				+0.5
2,246,037	+				+0.4
2,246,037	+				+1.3
2,246,037	+				+0.4
2,246,037	+				+1.2
2,246,037	+				-0.3
2,246,037	+				+0.2
2,246,037	+				+0.2
2,246,037	-				+0.1
2,246,037	-				+0.4
2,246,045	-				+0.2
2,246,045	-				+1.4
2,246,045	-				+0.0
2,246,045	-				+0.3
2,246,045	-				-0.8
2,246,045	-				+2.0
2,246,045	-				-0.4
2,246,045	-				+1.1
2,246,046	-				+0.7
2,246,048	+				+0.1
2,246,052	+				-0.4
2,246,055	-				-0.6
2,246,055	-				+0.4
2,246,060	-				-0.2
2,246,060	-				-0.2
2,246,071	-				-0.1
2,246,071	-				-0.4
2,246,084	-				+0.3
2,246,093	+				+0.2
2,246,093	+				+1.0
2,246,101	-				+0.1
2,246,101	-				+0.6
2,246,110	+				+0.4
2,246,110	+				-1.1
2,246,120	+				+1.1
2,246,120	+				-0.8
2,246,120	+				-0.5
2,246,128	-				+0.2
2,246,128	-				-0.3
2,246,128	-				+0.7
2,246,128	-				+0.1
2,246,128	-				+0.5
2,246,128	-				+0.4
2,246,128	-				-0.3
2,246,128	-				-1.0
2,246,128	-				+0.6
2,246,132	+				+0.6
2,246,138	-				+0.9
2,246,138	-				-0.2
2,246,138	-				-0.0
2,246,140	+				+1.9
2,246,141	-				+0.9
2,246,141	-				+0.6
2,246,141	-				+0.6
2,246,148	-				+0.3
2,246,148	-				+0.7
2,246,148	-				-0.6
2,246,148	-				+0.6
2,246,148	-				-0.9
2,246,148	-				+0.2
2,246,232	-				-0.0
2,246,262	+				+0.2
2,246,270	-				+0.0
2,246,289	-				+0.5
2,246,325	-				+0.8
2,246,356	+				+0.5
2,246,438	+				+0.8
2,246,446	-				+0.6
2,246,446	-				+1.7
2,246,456	-				+0.5
2,246,456	-				+0.7
2,246,470	+				+0.8
2,246,490	+				-0.3
2,246,495	+				+0.6
2,246,496	-				+0.5
2,246,512	+				+0.4
2,246,512	+				-0.5
2,246,512	+				-0.8
2,246,512	+				+0.0
2,246,512	+				+0.5
2,246,512	+				-0.1
2,246,512	+				-1.8
2,246,512	+				+0.4
2,246,512	+				-1.4
2,246,512	+				+0.1
2,246,512	+				-0.3
2,246,512	+				+0.9
2,246,512	+				-0.3
2,246,520	-				+0.2
2,246,520	-				-0.4
2,246,520	-				+0.6
2,246,520	-				+1.6
2,246,520	-				-1.6
2,246,520	-				+0.8
2,246,528	+				+0.5
2,246,528	+				-0.1
2,246,528	+				+0.9
2,246,528	+				+0.3
2,246,528	+				+0.1
2,246,528	+				+0.7
2,246,528	+				+0.4
2,246,528	+				-0.0
2,246,528	+				+0.3
2,246,528	+				+0.6
2,246,528	+				+1.1
2,246,528	+				-0.5
2,246,528	+				+0.5
2,246,528	+				-1.0
2,246,528	+				-0.4
2,246,528	+				-0.1
2,246,528	+				+1.0
2,246,534	+				-0.0
2,246,534	+				-0.2
2,246,534	+				+0.8
2,246,534	+				-0.2
2,246,534	+				+0.4
2,246,536	-				-0.1
2,246,536	-				+0.5
2,246,536	-				+0.3
2,246,536	-				+0.1
2,246,536	-				+0.4
2,246,536	-				+0.6
2,246,536	-				+0.2
2,246,536	-				+0.0
2,246,536	-				-0.0
2,246,536	-				+1.0
2,246,536	-				+1.4
2,246,536	-				+0.6
2,246,536	-				+0.3
2,246,542	-				+1.3
2,246,542	-				+1.0
2,246,542	-				-0.3
2,246,542	-				+1.0
2,246,542	-				-0.1
2,246,542	-				+0.1
2,246,542	-				-0.1
2,246,542	-				-0.0
2,246,558	+				+0.1
2,246,558	+				-0.4
2,246,558	+				-1.2
2,246,558	+				+0.1
2,246,558	+				+0.3
2,246,563	+				+0.5
2,246,571	-				+1.0
2,246,582	+				-0.1
2,246,582	+				+1.8
2,246,582	+				-0.2
2,246,582	+				-0.5
2,246,582	+				-0.6
2,246,582	+				-0.3
2,246,590	-				+1.1
2,246,590	-				+0.4
2,246,590	-				-0.1
2,246,590	-				+0.1
2,246,590	-				-0.0
2,246,590	-				+0.1
2,246,590	-				+0.4
2,246,590	-				+0.5
2,246,592	+				+0.2
2,246,592	+				-0.2
2,246,592	+				-0.2
2,246,592	+				-0.1
2,246,592	+				-0.9
2,246,592	+				-0.5
2,246,592	+				+0.4
2,246,592	+				-0.2
2,246,592	+				+0.6
2,246,592	+				+0.8
2,246,592	+				+0.2
2,246,592	+				-0.2
2,246,592	+				+0.5
2,246,592	+				+0.0
2,246,592	+				-0.1
2,246,592	+				+0.4
2,246,600	-				-0.2
2,246,600	-				-0.5
2,246,600	-				-1.1
2,246,600	-				-0.3
2,246,600	-				+0.6
2,246,600	-				+0.6
2,246,600	-				+0.6
2,246,636	+				-1.9
2,246,638	-				+0.8
2,246,638	-				-0.3
2,246,639	+				-0.0
2,246,644	+				-0.1
2,246,660	+				+0.0
2,246,663	+				-0.7
2,246,663	+				-0.3
2,246,664	+				+0.1
2,246,668	-				+0.4
2,246,668	-				+0.8
2,246,673	+				-0.5
2,246,673	+				-0.0
2,246,673	+				-0.7
2,246,681	-				+0.4
2,246,681	-				+0.7
2,246,681	-				+0.7
2,246,681	-				+0.5
2,246,686	-				-0.3
2,246,689	-				+0.4
2,246,689	-				+0.4
2,246,696	+				+1.0
2,246,696	+				+0.5
2,246,696	+				+0.4
2,246,696	+				-0.9
2,246,702	-				-0.4
2,246,704	-				-0.1
2,246,704	-				-0.3
2,246,711	-				+0.4
2,246,719	+				+0.1
2,246,719	+				-0.5
2,246,719	+				-0.0
2,246,720	-				-1.0
2,246,721	-				+0.6
2,246,727	+				+0.2
2,246,727	+				+0.4
2,246,727	-				+0.8
2,246,727	-				-0.1
2,246,729	+				+0.0
2,246,735	+				+0.2
2,246,737	-				+0.6
2,246,768	+				+0.1