Strain Fitness in Shewanella amazonensis SB2B around Sama_3185

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
3,775,876	-				-0.2
3,775,908	+				+0.0
3,775,908	+				+1.4
3,775,908	+				-0.6
3,775,908	+				-1.4
3,775,908	+				-0.5
3,775,908	+				+1.5
3,775,909	-				-0.1
3,775,909	-				-2.1
3,775,909	-				+0.3
3,775,909	-				+1.4
3,775,953	+				-0.0
3,775,954	-				+0.4
3,775,954	-				-0.1
3,775,971	+				-1.3
3,776,005	-				+1.4
3,776,005	-				+0.9
3,776,006	+				-1.3
3,776,007	-				+0.6
3,776,007	-				+1.9
3,776,104	-				+0.1
3,776,104	-				-0.9
3,776,104	-				-1.4
3,776,104	-				-0.2
3,776,118	-				-0.8
3,776,152	+				-0.2
3,776,152	+				+0.1
3,776,161	+				-1.1
3,776,162	-				+0.5
3,776,162	-				+0.9
3,776,162	-				-1.9
3,776,201	+		Sama_3184	0.12	-2.1
3,776,201	+		Sama_3184	0.12	-1.0
3,776,202	-		Sama_3184	0.12	+0.0
3,776,202	-		Sama_3184	0.12	-3.0
3,776,202	-		Sama_3184	0.12	-1.0
3,776,213	+		Sama_3184	0.15	-0.4
3,776,213	+		Sama_3184	0.15	+0.1
3,776,213	+		Sama_3184	0.15	-1.5
3,776,214	-		Sama_3184	0.15	+0.3
3,776,235	+		Sama_3184	0.19	+0.4
3,776,236	-		Sama_3184	0.19	-0.2
3,776,236	-		Sama_3184	0.19	-1.2
3,776,255	+		Sama_3184	0.23	+2.1
3,776,255	+		Sama_3184	0.23	+1.2
3,776,255	+		Sama_3184	0.23	+0.2
3,776,255	+		Sama_3184	0.23	-0.2
3,776,256	-		Sama_3184	0.24	+0.0
3,776,439	+		Sama_3184	0.61	-0.1
3,776,439	+		Sama_3184	0.61	+1.6
3,776,440	-		Sama_3184	0.61	+0.6
3,776,440	-		Sama_3184	0.61	-0.6
3,776,468	+		Sama_3184	0.67	-0.0
3,776,468	+		Sama_3184	0.67	+0.5
3,776,469	-		Sama_3184	0.67	-1.3
3,776,469	-		Sama_3184	0.67	-1.1
3,776,469	-		Sama_3184	0.67	+2.4
3,776,469	-		Sama_3184	0.67	+0.4
3,776,469	-		Sama_3184	0.67	+0.6
3,776,469	-		Sama_3184	0.67	-1.5
3,776,502	+		Sama_3184	0.74	-0.4
3,776,502	+		Sama_3184	0.74	-0.2
3,776,502	+		Sama_3184	0.74	+0.4
3,776,502	+		Sama_3184	0.74	-0.3
3,776,502	+		Sama_3184	0.74	+0.5
3,776,502	+		Sama_3184	0.74	+0.1
3,776,502	+		Sama_3184	0.74	-1.2
3,776,503	-		Sama_3184	0.74	+0.3
3,776,503	-		Sama_3184	0.74	-0.4
3,776,503	-		Sama_3184	0.74	-1.2
3,776,503	-		Sama_3184	0.74	+0.7
3,776,503	-		Sama_3184	0.74	-0.0
3,776,503	-		Sama_3184	0.74	+2.4
3,776,572	+		Sama_3184	0.88	+0.2
3,776,572	+		Sama_3184	0.88	+0.8
3,776,582	-				-0.5
3,776,601	-				-0.2
3,776,662	+				+0.5
3,776,662	+				-0.6
3,776,662	+				-0.5
3,776,663	-				+1.1
3,776,663	-				+0.4
3,776,663	-				-2.5
3,776,663	-				+0.9
3,776,663	-				-0.1
3,776,663	-				-2.1
3,776,663	-				+0.8
3,776,663	-				-0.4
3,776,664	+				-0.8
3,776,665	-				-0.4
3,776,665	-				-0.4
3,776,665	-				-0.7
3,776,683	+				-1.2
3,776,683	+				+1.7
3,776,683	+				+0.4
3,776,684	-				+0.0
3,776,684	-				+0.2
3,776,701	-				+1.2
3,776,728	-				-0.2
3,776,737	-				+0.4
3,776,835	-				+0.1
3,776,852	-				-0.0
3,776,872	+				-1.2
3,776,873	-				-1.4
3,777,021	-		Sama_3185	0.17	+0.0
3,777,047	+		Sama_3185	0.20	+0.1
3,777,047	+		Sama_3185	0.20	+0.9
3,777,047	+		Sama_3185	0.20	+2.1
3,777,048	-		Sama_3185	0.20	-1.0
3,777,048	-		Sama_3185	0.20	-1.0
3,777,048	-		Sama_3185	0.20	+0.3
3,777,054	+		Sama_3185	0.20	-0.1
3,777,054	+		Sama_3185	0.20	+0.4
3,777,054	+		Sama_3185	0.20	-0.7
3,777,054	+		Sama_3185	0.20	+0.6
3,777,055	-		Sama_3185	0.20	-1.5
3,777,072	+		Sama_3185	0.22	+0.5
3,777,072	+		Sama_3185	0.22	+0.7
3,777,072	+		Sama_3185	0.22	+0.3
3,777,072	+		Sama_3185	0.22	-0.2
3,777,073	-		Sama_3185	0.22	-0.6
3,777,073	-		Sama_3185	0.22	-0.8
3,777,073	-		Sama_3185	0.22	-2.2
3,777,073	-		Sama_3185	0.22	-1.6
3,777,119	+		Sama_3185	0.26	-1.2
3,777,120	-		Sama_3185	0.27	+0.2
3,777,123	+		Sama_3185	0.27	-1.0
3,777,219	+		Sama_3185	0.36	-2.1
3,777,220	-		Sama_3185	0.36	+0.7
3,777,220	-		Sama_3185	0.36	-1.0
3,777,220	-		Sama_3185	0.36	-0.4
3,777,220	-		Sama_3185	0.36	+1.3
3,777,220	-		Sama_3185	0.36	-0.3
3,777,223	+		Sama_3185	0.36	-1.0
3,777,223	+		Sama_3185	0.36	+0.3
3,777,223	+		Sama_3185	0.36	+0.5
3,777,223	+		Sama_3185	0.36	-1.3
3,777,223	+		Sama_3185	0.36	+0.2
3,777,223	+		Sama_3185	0.36	+0.4
3,777,223	+		Sama_3185	0.36	-1.4
3,777,223	+		Sama_3185	0.36	-0.8
3,777,224	-		Sama_3185	0.36	-0.1
3,777,224	-		Sama_3185	0.36	-0.2
3,777,224	-		Sama_3185	0.36	-0.1
3,777,224	-		Sama_3185	0.36	-1.8
3,777,224	-		Sama_3185	0.36	-2.4
3,777,224	-		Sama_3185	0.36	-1.0
3,777,224	-		Sama_3185	0.36	-0.0
3,777,224	-		Sama_3185	0.36	+0.6
3,777,224	-		Sama_3185	0.36	+0.2
3,777,224	-		Sama_3185	0.36	-0.3
3,777,265	+		Sama_3185	0.40	+0.2
3,777,265	+		Sama_3185	0.40	+0.6
3,777,265	+		Sama_3185	0.40	+1.2
3,777,265	+		Sama_3185	0.40	+0.3
3,777,266	-		Sama_3185	0.40	+0.8
3,777,266	-		Sama_3185	0.40	+0.1
3,777,298	-		Sama_3185	0.43	-0.4
3,777,349	+		Sama_3185	0.48	-1.6
3,777,349	+		Sama_3185	0.48	-1.0
3,777,459	+		Sama_3185	0.58	-0.9
3,777,489	+		Sama_3185	0.61	-0.1
3,777,528	+		Sama_3185	0.64	-2.0
3,777,528	+		Sama_3185	0.64	+0.9
3,777,528	+		Sama_3185	0.64	-0.2
3,777,528	+		Sama_3185	0.64	+0.6
3,777,528	+		Sama_3185	0.64	-0.4
3,777,528	+		Sama_3185	0.64	-2.2
3,777,528	+		Sama_3185	0.64	+0.0
3,777,529	-		Sama_3185	0.64	+0.6
3,777,529	-		Sama_3185	0.64	+0.3
3,777,529	-		Sama_3185	0.64	+0.2
3,777,529	-		Sama_3185	0.64	+0.1
3,777,531	+		Sama_3185	0.64	-1.0
3,777,531	+		Sama_3185	0.64	+1.2
3,777,531	+		Sama_3185	0.64	+0.7
3,777,531	+		Sama_3185	0.64	+1.6
3,777,531	+		Sama_3185	0.64	-0.7
3,777,531	+		Sama_3185	0.64	+1.5
3,777,531	+		Sama_3185	0.64	-1.4
3,777,531	+		Sama_3185	0.64	+0.5
3,777,532	-		Sama_3185	0.65	+0.4
3,777,532	-		Sama_3185	0.65	+0.1
3,777,532	-		Sama_3185	0.65	+0.2
3,777,532	-		Sama_3185	0.65	+0.5
3,777,532	-		Sama_3185	0.65	+0.9
3,777,532	-		Sama_3185	0.65	+1.4
3,777,532	-		Sama_3185	0.65	-0.2
3,777,532	-		Sama_3185	0.65	-0.3
3,777,765	-		Sama_3185	0.86	-0.1
3,777,765	-		Sama_3185	0.86	+0.6
3,777,765	-		Sama_3185	0.86	-0.8
3,777,765	-		Sama_3185	0.86	+1.4
3,777,765	-		Sama_3185	0.86	-2.9
3,777,765	-		Sama_3185	0.86	+0.3
3,777,781	+		Sama_3185	0.88	-0.1
3,777,819	+				-0.3
3,777,819	+				+0.0
3,777,820	-				+0.1
3,777,830	-				-0.6
3,777,830	-				+1.0
3,777,862	-				+0.6
3,777,915	+				-0.2
3,777,915	+				-0.2
3,777,915	+				+0.4
3,777,916	-				+0.2
3,777,916	-				-0.6
3,777,916	-				+0.2
3,777,916	-				-0.1
3,777,916	-				-1.0
3,777,941	+				+0.5
3,777,942	-				+0.9
3,777,961	-				+1.1
3,777,997	+				+0.4
3,778,073	+				-0.4
3,778,073	+				+0.6
3,778,073	+				-0.3
3,778,073	+				+0.2
3,778,209	+				+0.8
3,778,209	+				-1.0
3,778,209	+				+0.7
3,778,210	-				+0.6
3,778,267	+				-0.5
3,778,299	+				-0.4
3,778,300	-				-1.4
3,778,381	-				+1.8
3,778,410	+		Sama_3186	0.14	+1.1
3,778,410	+		Sama_3186	0.14	+0.2
3,778,410	+		Sama_3186	0.14	+0.4
3,778,410	+		Sama_3186	0.14	+1.5
3,778,411	-		Sama_3186	0.15	-1.5
3,778,411	-		Sama_3186	0.15	-0.1
3,778,411	-		Sama_3186	0.15	+0.6
3,778,411	-		Sama_3186	0.15	+1.1
3,778,411	-		Sama_3186	0.15	+0.5
3,778,438	+		Sama_3186	0.20	+1.4
3,778,438	+		Sama_3186	0.20	-0.6
3,778,439	-		Sama_3186	0.20	+0.1
3,778,566	-		Sama_3186	0.43	+0.1
3,778,570	-		Sama_3186	0.44	+1.8
3,778,570	-		Sama_3186	0.44	-1.8
3,778,633	+		Sama_3186	0.56	+0.5
3,778,633	+		Sama_3186	0.56	-0.5
3,778,633	+		Sama_3186	0.56	-0.6
3,778,634	-		Sama_3186	0.56	+0.1
3,778,634	-		Sama_3186	0.56	+0.5
3,778,634	-		Sama_3186	0.56	-1.8
3,778,649	-		Sama_3186	0.59	+1.4
3,778,823	+				-0.4
3,778,823	+				+1.0
3,778,823	+				+0.3
3,778,830	+				+0.9
3,778,843	-				+0.4
3,778,855	-				+1.8
3,778,855	-				+1.4