Strain Fitness in Shewanella amazonensis SB2B around Sama_3123

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
3,702,223	+				+0.6
3,702,261	-				+0.9
3,702,303	+				+1.3
3,702,304	-				-1.7
3,702,307	+				+1.0
3,702,366	+		Sama_3122	0.14	+0.6
3,702,367	-		Sama_3122	0.14	-2.0
3,702,371	-		Sama_3122	0.15	-0.1
3,702,399	-		Sama_3122	0.19	-2.4
3,702,442	+		Sama_3122	0.25	+1.6
3,702,467	+		Sama_3122	0.29	-2.0
3,702,480	+		Sama_3122	0.31	-1.2
3,702,480	+		Sama_3122	0.31	-0.1
3,702,484	+		Sama_3122	0.31	-0.7
3,702,484	+		Sama_3122	0.31	+0.2
3,702,484	+		Sama_3122	0.31	-0.1
3,702,484	+		Sama_3122	0.31	-0.4
3,702,484	+		Sama_3122	0.31	-0.2
3,702,484	+		Sama_3122	0.31	+2.7
3,702,484	+		Sama_3122	0.31	+0.4
3,702,484	+		Sama_3122	0.31	-0.6
3,702,485	-		Sama_3122	0.31	+0.2
3,702,485	-		Sama_3122	0.31	+0.6
3,702,485	-		Sama_3122	0.31	-1.5
3,702,485	-		Sama_3122	0.31	+0.8
3,702,485	-		Sama_3122	0.31	-0.2
3,702,530	+		Sama_3122	0.38	+0.6
3,702,538	+		Sama_3122	0.39	-0.5
3,702,538	+		Sama_3122	0.39	+2.5
3,702,542	+		Sama_3122	0.40	+1.2
3,702,542	+		Sama_3122	0.40	-0.7
3,702,553	+		Sama_3122	0.41	+0.6
3,702,553	+		Sama_3122	0.41	-0.9
3,702,603	-		Sama_3122	0.48	+1.0
3,702,604	+		Sama_3122	0.48	+0.5
3,702,604	+		Sama_3122	0.48	+0.6
3,702,604	+		Sama_3122	0.48	-1.0
3,702,625	+		Sama_3122	0.51	-0.4
3,702,625	+		Sama_3122	0.51	-1.6
3,702,689	-		Sama_3122	0.61	+1.3
3,702,698	+		Sama_3122	0.62	+1.3
3,702,698	+		Sama_3122	0.62	-1.6
3,702,698	+		Sama_3122	0.62	-1.7
3,702,702	-		Sama_3122	0.62	+0.3
3,702,712	+		Sama_3122	0.64	-0.0
3,702,712	+		Sama_3122	0.64	+0.6
3,702,712	+		Sama_3122	0.64	+0.3
3,702,712	+		Sama_3122	0.64	-0.4
3,702,712	+		Sama_3122	0.64	-1.0
3,702,713	-		Sama_3122	0.64	+0.2
3,702,713	-		Sama_3122	0.64	+0.7
3,702,713	-		Sama_3122	0.64	+0.0
3,702,735	-		Sama_3122	0.67	+0.3
3,702,774	+		Sama_3122	0.73	+0.9
3,702,774	+		Sama_3122	0.73	-2.3
3,702,774	+		Sama_3122	0.73	+0.2
3,702,774	+		Sama_3122	0.73	+0.3
3,702,775	-		Sama_3122	0.73	+0.2
3,702,780	+		Sama_3122	0.74	+0.1
3,702,780	+		Sama_3122	0.74	+2.0
3,702,780	+		Sama_3122	0.74	-1.4
3,702,780	+		Sama_3122	0.74	+1.3
3,702,781	-		Sama_3122	0.74	-0.2
3,702,781	-		Sama_3122	0.74	-1.2
3,702,781	-		Sama_3122	0.74	+0.2
3,702,781	-		Sama_3122	0.74	-1.1
3,702,798	+		Sama_3122	0.76	-1.0
3,702,798	+		Sama_3122	0.76	-0.5
3,702,810	+		Sama_3122	0.78	+0.6
3,702,843	+		Sama_3122	0.83	+0.6
3,702,856	+		Sama_3122	0.85	+0.5
3,702,856	+		Sama_3122	0.85	-0.1
3,702,856	+		Sama_3122	0.85	-0.7
3,702,856	+		Sama_3122	0.85	+0.5
3,702,857	-		Sama_3122	0.85	+1.0
3,702,902	+				-0.2
3,702,902	+				-0.4
3,702,903	-				-0.8
3,702,903	-				-0.6
3,702,917	+				+0.2
3,702,917	+				-0.1
3,702,918	-				-1.7
3,702,918	-				+0.3
3,702,922	+				+2.2
3,702,923	-				-0.7
3,702,940	+				-0.0
3,702,985	-				-0.1
3,702,999	+				+0.6
3,702,999	+				-0.5
3,702,999	+				-0.5
3,702,999	+				-0.7
3,702,999	+				+1.9
3,702,999	+				-0.5
3,703,016	+				-1.5
3,703,094	+				+0.7
3,703,119	-				-1.0
3,703,187	-				+0.7
3,703,212	+				-1.2
3,703,266	+				+1.0
3,703,296	+		Sama_3123	0.11	+1.3
3,703,296	+		Sama_3123	0.11	+1.8
3,703,297	-		Sama_3123	0.11	+0.3
3,703,297	-		Sama_3123	0.11	-0.2
3,703,316	-		Sama_3123	0.13	+1.3
3,703,351	-		Sama_3123	0.18	+0.9
3,703,410	+		Sama_3123	0.26	+0.2
3,703,424	-		Sama_3123	0.28	+1.5
3,703,455	+		Sama_3123	0.32	+0.2
3,703,477	-		Sama_3123	0.35	-0.0
3,703,653	+		Sama_3123	0.58	+0.2
3,703,655	+		Sama_3123	0.58	-0.7
3,703,655	+		Sama_3123	0.58	-0.9
3,703,655	+		Sama_3123	0.58	-2.3
3,703,655	+		Sama_3123	0.58	+1.6
3,703,655	+		Sama_3123	0.58	-1.3
3,703,658	+		Sama_3123	0.59	+0.6
3,703,658	+		Sama_3123	0.59	+0.0
3,703,658	+		Sama_3123	0.59	+0.2
3,703,678	+		Sama_3123	0.61	+0.8
3,703,679	-		Sama_3123	0.62	+0.3
3,703,792	-		Sama_3123	0.77	-0.5
3,703,821	+		Sama_3123	0.81	-0.3
3,703,852	+		Sama_3123	0.85	+0.9
3,703,857	+		Sama_3123	0.85	+1.3
3,703,901	-				+0.4
3,703,926	-				+0.2
3,704,022	+				+2.1
3,704,022	+				-0.4
3,704,022	+				+0.3
3,704,025	-				+0.5
3,704,025	-				-1.5
3,704,025	-				+0.2
3,704,037	-				-0.2
3,704,043	+				+0.6
3,704,082	-				+0.6
3,704,121	+				-0.8
3,704,121	+				-1.0
3,704,122	-				+0.5
3,704,122	-				-0.1
3,704,122	-				-0.2
3,704,145	-				-1.4
3,704,145	-				-0.6
3,704,263	-				-3.6
3,704,263	-				+0.3
3,704,269	-				-1.4
3,704,280	-				-0.7
3,704,280	-				+1.3
3,704,284	+				-0.3
3,704,284	+				-0.1
3,704,284	+				+0.1
3,704,284	+				-1.2
3,704,285	-				-0.6
3,704,285	-				+1.3
3,704,285	-				-0.3
3,704,285	-				-0.8
3,704,285	-				-0.9
3,704,285	-				+0.9
3,704,285	-				-0.8
3,704,285	-				+0.3
3,704,317	+				+2.6
3,704,317	+				-0.1
3,704,317	+				-0.3
3,704,318	-				-0.2
3,704,363	+				+0.4
3,704,386	+				-0.6
3,704,386	+				+0.2
3,704,386	+				-1.7
3,704,386	+				+0.9
3,704,387	-				+0.2
3,704,387	-				+0.0
3,704,387	-				+2.1
3,704,387	-				+0.3
3,704,387	-				+0.3
3,704,387	-				+0.5
3,704,387	-				+0.2
3,704,387	-				+1.6
3,704,387	-				+0.0
3,704,387	-				+1.3
3,704,482	-				+1.5
3,704,500	-				-1.5
3,704,506	-				+1.3
3,704,506	-				-0.5
3,704,506	-				+0.1
3,704,506	-				+0.3
3,704,506	-				+0.9
3,704,506	-				+1.1
3,704,549	-				+2.1