Strain Fitness in Shewanella amazonensis SB2B around Sama_3066

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
3,642,411	+				-0.8
3,642,412	-				-1.3
3,642,438	+				+0.3
3,642,439	-				-1.0
3,642,439	-				+1.5
3,642,439	-				-1.2
3,642,479	+				-1.3
3,642,480	-				+1.7
3,642,494	+				-0.3
3,642,505	+				+1.3
3,642,505	+				+1.3
3,642,511	+				-1.0
3,642,511	+				-0.1
3,642,512	-				-0.9
3,642,512	-				+0.7
3,642,547	+				-0.1
3,642,547	+				+0.3
3,642,547	+				-1.0
3,642,571	+				-1.0
3,642,582	+		Sama_3065	0.10	+1.5
3,642,583	-		Sama_3065	0.10	+1.1
3,642,645	-		Sama_3065	0.18	-2.1
3,642,685	+		Sama_3065	0.24	-1.9
3,642,686	-		Sama_3065	0.24	-0.6
3,642,686	-		Sama_3065	0.24	-0.4
3,642,686	-		Sama_3065	0.24	-0.2
3,642,687	+		Sama_3065	0.24	-1.8
3,642,687	+		Sama_3065	0.24	+0.3
3,642,687	+		Sama_3065	0.24	-0.7
3,642,687	+		Sama_3065	0.24	-0.1
3,642,687	+		Sama_3065	0.24	+0.5
3,642,687	+		Sama_3065	0.24	+0.6
3,642,687	+		Sama_3065	0.24	-0.7
3,642,687	+		Sama_3065	0.24	-0.7
3,642,687	+		Sama_3065	0.24	-0.4
3,642,687	+		Sama_3065	0.24	-1.7
3,642,688	-		Sama_3065	0.24	-0.2
3,642,688	-		Sama_3065	0.24	-0.2
3,642,688	-		Sama_3065	0.24	+0.3
3,642,688	-		Sama_3065	0.24	+0.3
3,642,688	-		Sama_3065	0.24	+1.0
3,642,688	-		Sama_3065	0.24	+1.1
3,642,688	-		Sama_3065	0.24	-0.8
3,642,688	-		Sama_3065	0.24	+0.8
3,642,688	-		Sama_3065	0.24	+0.3
3,642,688	-		Sama_3065	0.24	-0.4
3,642,729	+		Sama_3065	0.30	-0.3
3,642,729	+		Sama_3065	0.30	-0.4
3,642,729	+		Sama_3065	0.30	+2.1
3,642,730	-		Sama_3065	0.30	-1.3
3,642,768	+		Sama_3065	0.35	+0.3
3,642,768	+		Sama_3065	0.35	+0.1
3,642,768	+		Sama_3065	0.35	+0.1
3,642,769	-		Sama_3065	0.35	-0.4
3,642,769	-		Sama_3065	0.35	-0.9
3,642,792	+		Sama_3065	0.38	+0.2
3,642,792	+		Sama_3065	0.38	-2.4
3,642,792	+		Sama_3065	0.38	+3.7
3,642,792	+		Sama_3065	0.38	-0.8
3,642,792	+		Sama_3065	0.38	-1.1
3,642,793	-		Sama_3065	0.38	-1.0
3,642,810	+		Sama_3065	0.41	-1.3
3,642,810	+		Sama_3065	0.41	-0.3
3,642,833	+		Sama_3065	0.44	+1.2
3,642,833	+		Sama_3065	0.44	-0.4
3,642,833	+		Sama_3065	0.44	-2.3
3,642,833	+		Sama_3065	0.44	-1.5
3,642,834	-		Sama_3065	0.44	-0.2
3,642,855	+		Sama_3065	0.47	-1.4
3,642,855	+		Sama_3065	0.47	-0.3
3,642,856	-		Sama_3065	0.47	+0.7
3,642,867	+		Sama_3065	0.48	-1.1
3,642,899	+		Sama_3065	0.52	-0.7
3,642,899	+		Sama_3065	0.52	+0.6
3,642,899	+		Sama_3065	0.52	+0.7
3,642,899	+		Sama_3065	0.52	+0.0
3,642,899	+		Sama_3065	0.52	-1.2
3,642,900	-		Sama_3065	0.53	-0.4
3,642,900	-		Sama_3065	0.53	-1.5
3,642,909	+		Sama_3065	0.54	-0.9
3,642,923	+		Sama_3065	0.56	-1.3
3,642,924	-		Sama_3065	0.56	-0.7
3,642,951	+		Sama_3065	0.59	-1.8
3,642,951	+		Sama_3065	0.59	-1.7
3,642,952	-		Sama_3065	0.60	-1.2
3,642,952	-		Sama_3065	0.60	-1.3
3,643,012	+		Sama_3065	0.68	-0.4
3,643,012	+		Sama_3065	0.68	+0.6
3,643,013	-		Sama_3065	0.68	-0.6
3,643,050	+		Sama_3065	0.73	-0.6
3,643,050	+		Sama_3065	0.73	-1.2
3,643,050	+		Sama_3065	0.73	-1.1
3,643,051	-		Sama_3065	0.73	+0.6
3,643,051	-		Sama_3065	0.73	+1.0
3,643,051	-		Sama_3065	0.73	-0.3
3,643,097	+		Sama_3065	0.79	-1.1
3,643,098	-		Sama_3065	0.79	-2.4
3,643,115	+		Sama_3065	0.81	+0.0
3,643,122	+		Sama_3065	0.82	-0.9
3,643,122	+		Sama_3065	0.82	-1.3
3,643,122	+		Sama_3065	0.82	-0.4
3,643,123	-		Sama_3065	0.82	-0.8
3,643,131	-		Sama_3065	0.84	-0.9
3,643,177	-		Sama_3065	0.90	-1.5
3,643,239	+				-0.8
3,643,239	+				+0.2
3,643,239	+				-0.5
3,643,240	-				-0.2
3,643,240	-				+1.3
3,643,240	-				-0.7
3,643,240	-				+1.1
3,643,240	-				-0.4
3,643,240	-				-0.1
3,643,240	-				-1.1
3,643,240	-				-0.5
3,643,240	-				+0.1
3,643,240	-				-1.0
3,643,240	-				-0.5
3,643,240	-				+1.7
3,643,241	+				-1.0
3,643,242	-				-0.7
3,643,242	-				-0.4
3,643,242	-				-2.1
3,643,242	-				-0.5
3,643,251	+				-1.3
3,643,251	+				+1.0
3,643,258	+				+0.3
3,643,258	+				+0.6
3,643,282	-				+0.5
3,643,311	+				-0.2
3,643,312	-				+0.9
3,643,341	+				-1.6
3,643,341	+				-0.9
3,643,424	-		Sama_3066	0.12	-1.6
3,643,460	+		Sama_3066	0.17	-0.8
3,643,527	+		Sama_3066	0.26	-2.1
3,643,528	-		Sama_3066	0.26	-3.1
3,643,528	-		Sama_3066	0.26	-1.1
3,643,658	-		Sama_3066	0.44	-0.9
3,643,658	-		Sama_3066	0.44	-1.0
3,643,700	+		Sama_3066	0.50	-1.0
3,643,700	+		Sama_3066	0.50	-1.8
3,643,701	-		Sama_3066	0.50	-1.8
3,643,733	-		Sama_3066	0.54	-2.1
3,643,784	+		Sama_3066	0.61	-0.4
3,643,784	+		Sama_3066	0.61	-1.0
3,643,864	+		Sama_3066	0.72	-2.9
3,643,865	-		Sama_3066	0.73	-0.3
3,643,865	-		Sama_3066	0.73	-1.9
3,643,865	-		Sama_3066	0.73	+0.0
3,643,865	-		Sama_3066	0.73	-0.7
3,644,030	+				-0.8
3,644,031	-				-0.5
3,644,082	+				+0.0
3,644,095	+				+0.8
3,644,104	+				-1.7
3,644,466	+		Sama_3067	0.16	-3.0
3,644,466	+		Sama_3067	0.16	-1.5
3,644,467	-		Sama_3067	0.16	-2.8
3,644,467	-		Sama_3067	0.16	-1.2
3,644,507	-		Sama_3067	0.18	-0.9
3,644,593	+		Sama_3067	0.21	-2.3
3,644,593	+		Sama_3067	0.21	-3.0
3,644,594	-		Sama_3067	0.21	-1.4
3,644,605	+		Sama_3067	0.22	-1.8
3,644,605	+		Sama_3067	0.22	-2.5
3,644,605	+		Sama_3067	0.22	-1.7
3,644,605	+		Sama_3067	0.22	+0.0
3,644,605	+		Sama_3067	0.22	-1.1
3,644,606	-		Sama_3067	0.22	-0.4
3,644,606	-		Sama_3067	0.22	-1.6
3,644,606	-		Sama_3067	0.22	-1.3
3,644,606	-		Sama_3067	0.22	-2.4
3,644,606	-		Sama_3067	0.22	+0.1
3,644,698	-		Sama_3067	0.25	-0.5
3,644,698	-		Sama_3067	0.25	-0.7
3,644,703	+		Sama_3067	0.26	-1.3
3,644,704	-		Sama_3067	0.26	-0.8
3,644,813	-		Sama_3067	0.30	-2.7
3,644,823	+		Sama_3067	0.31	-2.3
3,644,824	-		Sama_3067	0.31	+0.7
3,644,824	-		Sama_3067	0.31	-0.3
3,644,824	-		Sama_3067	0.31	-1.7
3,644,824	-		Sama_3067	0.31	-1.3
3,644,868	+		Sama_3067	0.32	-0.8
3,644,868	+		Sama_3067	0.32	-1.5
3,644,869	-		Sama_3067	0.32	-2.2
3,644,956	-		Sama_3067	0.36	-3.3
3,644,956	-		Sama_3067	0.36	-2.4
3,645,019	+		Sama_3067	0.39	-2.5
3,645,020	-		Sama_3067	0.39	-1.8
3,645,020	-		Sama_3067	0.39	+0.3