Strain Fitness in Shewanella amazonensis SB2B around Sama_2725

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
3,259,453	-				+2.9
3,259,453	-				+2.6
3,259,453	-				+2.7
3,259,453	-				+3.5
3,259,453	-				+2.5
3,259,487	+				+6.1
3,259,488	-				+2.4
3,259,501	-				+1.1
3,259,501	-				+2.0
3,259,501	-				+0.9
3,259,501	-				-1.8
3,259,583	-		Sama_2724	0.19	+1.4
3,259,583	-		Sama_2724	0.19	+1.7
3,259,791	-		Sama_2724	0.55	+0.7
3,259,791	-		Sama_2724	0.55	+0.9
3,259,791	-		Sama_2724	0.55	-0.3
3,259,836	+		Sama_2724	0.62	+5.8
3,259,837	-		Sama_2724	0.63	-0.6
3,259,837	-		Sama_2724	0.63	+0.5
3,259,837	-		Sama_2724	0.63	-0.0
3,259,837	-		Sama_2724	0.63	+1.1
3,259,837	-		Sama_2724	0.63	+1.0
3,259,837	-		Sama_2724	0.63	+0.8
3,259,837	-		Sama_2724	0.63	+0.5
3,259,908	-		Sama_2724	0.75	+0.3
3,259,908	-		Sama_2724	0.75	+0.7
3,259,933	-		Sama_2724	0.79	+0.9
3,260,052	-				+1.6
3,260,071	-				+0.5
3,260,091	-				+0.7
3,260,162	+				+1.5
3,260,261	+				-0.1
3,260,261	+				+1.2
3,260,261	+				-0.0
3,260,261	+				-1.5
3,260,261	+				+0.1
3,260,261	+				+0.1
3,260,261	+				-0.5
3,260,262	-				+1.7
3,260,262	-				-1.0
3,260,262	-				-2.2
3,260,262	-				-3.1
3,260,262	-				+0.3
3,260,262	-				+0.2
3,260,262	-				-2.3
3,260,263	+				-2.9
3,260,263	+				-2.2
3,260,263	+				+1.2
3,260,263	+				-2.1
3,260,263	+				-1.3
3,260,263	+				-1.3
3,260,263	+				-0.3
3,260,263	+				-1.3
3,260,263	+				+0.0
3,260,263	+				+1.2
3,260,263	+				-0.5
3,260,263	+				-0.3
3,260,263	+				-0.3
3,260,263	+				-0.0
3,260,263	+				-1.3
3,260,264	-				-0.3
3,260,264	-				-3.3
3,260,264	-				-2.1
3,260,264	-				-2.5
3,260,264	-				-2.2
3,260,264	-				-1.4
3,260,265	+				-0.2
3,260,265	+				-0.8
3,260,265	+				-2.1
3,260,266	-				+1.0
3,260,266	-				-2.8
3,260,266	-				-3.0
3,260,266	-				-1.3
3,260,266	-				-0.6
3,260,266	-				-1.0
3,260,277	+				-0.8
3,260,277	+				-2.2
3,260,278	-				+0.9
3,260,278	-				-2.5
3,260,278	-				-1.9
3,260,309	+				-1.4
3,260,309	+				-1.6
3,260,321	+				+0.1
3,260,321	+				-0.6
3,260,321	+				-2.9
3,260,321	+				+0.7
3,260,321	+				-1.7
3,260,322	-				-1.1
3,260,343	+		Sama_2725	0.14	-0.1
3,260,343	+		Sama_2725	0.14	-1.7
3,260,344	-		Sama_2725	0.14	-0.8
3,260,344	-		Sama_2725	0.14	-0.3
3,260,476	+		Sama_2725	0.57	-2.9
3,260,476	+		Sama_2725	0.57	-1.5
3,260,477	-		Sama_2725	0.57	-0.5
3,260,523	+		Sama_2725	0.72	-0.2
3,260,523	+		Sama_2725	0.72	-1.1
3,260,523	+		Sama_2725	0.72	+0.2
3,260,523	+		Sama_2725	0.72	-1.0
3,260,523	+		Sama_2725	0.72	-1.8
3,260,523	+		Sama_2725	0.72	-1.6
3,260,523	+		Sama_2725	0.72	-0.8
3,260,523	+		Sama_2725	0.72	-2.9
3,260,523	+		Sama_2725	0.72	-2.8
3,260,523	+		Sama_2725	0.72	-1.0
3,260,523	+		Sama_2725	0.72	-2.3
3,260,524	-		Sama_2725	0.72	-2.2
3,260,525	+		Sama_2725	0.72	+0.1
3,260,525	+		Sama_2725	0.72	-0.8
3,260,525	+		Sama_2725	0.72	-1.3
3,260,525	+		Sama_2725	0.72	-3.0
3,260,525	+		Sama_2725	0.72	+0.7
3,260,525	+		Sama_2725	0.72	-2.0
3,260,525	+		Sama_2725	0.72	-1.4
3,260,525	+		Sama_2725	0.72	-1.4
3,260,525	+		Sama_2725	0.72	-2.9
3,260,525	+		Sama_2725	0.72	+2.2
3,260,525	+		Sama_2725	0.72	-0.8
3,260,525	+		Sama_2725	0.72	-0.3
3,260,526	-		Sama_2725	0.73	-2.1
3,260,634	+				-0.2
3,260,647	+				-0.6
3,260,647	+				-1.8
3,260,647	+				+1.2
3,260,647	+				-1.1
3,260,647	+				-0.7
3,260,647	+				-1.6
3,260,647	+				-1.3
3,260,647	+				-0.3
3,260,688	+				-0.6
3,260,688	+				+0.7
3,260,688	+				+0.1
3,260,705	+				+0.1
3,260,770	+				-0.0
3,260,770	+				-0.6
3,260,770	+				-1.7
3,260,770	+				-0.2
3,260,850	+				-0.3
3,260,850	+				-0.5
3,260,850	+				-0.9
3,260,851	-				-0.5
3,260,851	-				-1.1
3,260,898	+				+0.2
3,260,951	+		Sama_2726	0.15	+0.1
3,260,952	-		Sama_2726	0.15	-0.4
3,260,952	-		Sama_2726	0.15	+0.4
3,261,062	+		Sama_2726	0.31	-0.6
3,261,062	+		Sama_2726	0.31	+0.2
3,261,062	+		Sama_2726	0.31	-2.3
3,261,085	-		Sama_2726	0.34	+0.2
3,261,097	+		Sama_2726	0.36	-0.5
3,261,098	-		Sama_2726	0.36	+1.2
3,261,170	-		Sama_2726	0.46	+0.7
3,261,170	-		Sama_2726	0.46	+0.1
3,261,170	-		Sama_2726	0.46	+1.5
3,261,206	+		Sama_2726	0.52	+0.1
3,261,206	+		Sama_2726	0.52	-0.9
3,261,206	+		Sama_2726	0.52	-0.3
3,261,207	-		Sama_2726	0.52	+0.7
3,261,207	-		Sama_2726	0.52	-0.8
3,261,207	-		Sama_2726	0.52	+1.7
3,261,301	+		Sama_2726	0.66	+0.1
3,261,318	+		Sama_2726	0.68	+0.4
3,261,318	+		Sama_2726	0.68	-0.4
3,261,318	+		Sama_2726	0.68	-1.0
3,261,318	+		Sama_2726	0.68	+0.6
3,261,319	-		Sama_2726	0.68	+0.1
3,261,319	-		Sama_2726	0.68	-0.1
3,261,319	-		Sama_2726	0.68	+0.4
3,261,319	-		Sama_2726	0.68	-1.8
3,261,320	+		Sama_2726	0.68	+0.4
3,261,320	+		Sama_2726	0.68	+0.0
3,261,321	-		Sama_2726	0.68	+0.3
3,261,379	+		Sama_2726	0.77	+0.1
3,261,380	-		Sama_2726	0.77	-2.5
3,261,494	+				+0.5
3,261,495	-				-0.0
3,261,495	-				+0.2
3,261,532	-				+0.2
3,261,532	-				+0.5
3,261,532	-				-1.2
3,261,532	-				-0.4
3,261,535	+				-0.7
3,261,535	+				+0.5
3,261,535	+				-1.9
3,261,576	+				+0.3
3,261,589	-				+0.9
3,261,589	-				+1.5