Strain Fitness in Shewanella amazonensis SB2B around Sama_R0099

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
2,789,540	+		Sama_2326	0.22	-2.2
2,789,540	+		Sama_2326	0.22	-0.0
2,789,541	-		Sama_2326	0.22	+0.6
2,789,541	-		Sama_2326	0.22	-0.2
2,789,583	-		Sama_2326	0.26	+0.4
2,789,632	-		Sama_2326	0.30	-0.2
2,789,632	-		Sama_2326	0.30	-1.7
2,789,705	+		Sama_2326	0.36	-0.5
2,789,727	-		Sama_2326	0.38	-1.9
2,789,757	+		Sama_2326	0.40	+0.2
2,789,757	+		Sama_2326	0.40	+1.3
2,789,758	-		Sama_2326	0.41	-2.2
2,789,878	+		Sama_2326	0.51	+0.1
2,789,879	-		Sama_2326	0.51	-0.5
2,789,879	-		Sama_2326	0.51	+1.1
2,789,879	-		Sama_2326	0.51	+0.1
2,789,932	+		Sama_2326	0.55	-0.2
2,789,933	-		Sama_2326	0.55	-0.2
2,789,945	+		Sama_2326	0.56	-0.6
2,789,946	-		Sama_2326	0.57	+0.7
2,790,013	-		Sama_2326	0.62	+0.1
2,790,060	+		Sama_2326	0.66	+0.2
2,790,060	+		Sama_2326	0.66	-1.5
2,790,123	+		Sama_2326	0.72	-0.5
2,790,124	-		Sama_2326	0.72	+1.4
2,790,134	+		Sama_2326	0.73	-1.2
2,790,143	+		Sama_2326	0.73	+1.1
2,790,144	-		Sama_2326	0.73	-0.7
2,790,300	-		Sama_2326	0.87	+0.2
2,790,330	+		Sama_2326	0.89	-1.2
2,790,331	-		Sama_2326	0.89	-1.2
2,790,347	+				-0.1
2,790,347	+				-0.3
2,790,348	-				+2.1
2,790,416	+				-0.1
2,790,462	+				-0.9
2,790,463	-				+0.1
2,790,466	+				+0.4
2,790,466	+				-0.7
2,790,466	+				+0.6
2,790,489	-				-1.5
2,790,493	+				-0.4
2,790,494	-				-1.8
2,790,498	-				-1.9
2,790,500	-				-1.7
2,790,500	-				-2.7
2,790,516	+				-1.9
2,790,519	-		Sama_R0099	0.11	-2.9
2,790,531	+		Sama_R0099	0.26	-1.2
2,790,547	+		Sama_R0099	0.47	-2.8
2,790,547	+		Sama_R0099	0.47	-3.0
2,790,680	+				+0.4
2,790,711	+				-1.2
2,790,718	+				-0.8
2,790,718	+				-0.3
2,790,718	+				-1.4
2,790,718	+				-0.6
2,790,722	+				-0.0
2,790,723	-				-1.1
2,790,740	+				-1.2
2,790,777	-				-0.2
2,790,777	-				-0.9
2,790,803	+				-0.5
2,790,803	+				+1.1
2,790,803	+				+0.1
2,790,842	+				-1.0
2,790,843	-				+0.1
2,790,888	+				+1.5
2,790,888	+				-0.7
2,790,889	-				+0.5
2,790,889	-				-0.8
2,790,921	+				-0.4
2,790,946	-				+1.2
2,790,951	-				+0.7
2,790,967	+				+0.4
2,790,967	+				+0.3
2,790,968	-				-1.7
2,790,985	+				+0.0
2,790,986	-				+0.4
2,790,986	-				-0.6
2,790,986	-				-1.4
2,791,013	+				+0.5
2,791,014	-				+0.6
2,791,033	+				+0.7
2,791,034	-				-0.6
2,791,063	+				-1.0
2,791,063	+				+1.6
2,791,064	-				+0.2
2,791,064	-				-0.7
2,791,080	+				+0.7
2,791,080	+				-0.2
2,791,080	+				-1.4
2,791,080	+				+1.0
2,791,081	-				+0.1
2,791,081	-				+0.1
2,791,081	-				-1.3
2,791,081	-				-0.2
2,791,081	-				+0.0
2,791,081	-				+1.4
2,791,081	-				+0.1
2,791,081	-				+0.1
2,791,081	-				-2.7
2,791,207	-				+0.1
2,791,213	+				+0.1
2,791,214	-				-0.5
2,791,217	+				-0.1
2,791,412	+		Sama_2327	0.12	-0.5
2,791,412	+		Sama_2327	0.12	+0.1
2,791,412	+		Sama_2327	0.12	+1.4
2,791,413	-		Sama_2327	0.12	+0.6
2,791,413	-		Sama_2327	0.12	+0.9
2,791,424	-		Sama_2327	0.13	-2.1
2,791,424	-		Sama_2327	0.13	+1.1
2,791,464	-		Sama_2327	0.16	+0.1
2,791,468	+		Sama_2327	0.16	+1.1
2,791,468	+		Sama_2327	0.16	+0.2
2,791,469	-		Sama_2327	0.16	+0.3
2,791,469	-		Sama_2327	0.16	-0.4
2,791,469	-		Sama_2327	0.16	-1.5
2,791,469	-		Sama_2327	0.16	+0.6