Strain Fitness in Shewanella amazonensis SB2B around Sama_2306

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
2,770,193	-		Sama_2304	0.74	+1.8
2,770,210	+		Sama_2304	0.75	+1.3
2,770,217	-		Sama_2304	0.76	+1.4
2,770,263	+		Sama_2304	0.79	+0.1
2,770,264	-		Sama_2304	0.79	+0.9
2,770,401	-		Sama_2304	0.89	+0.4
2,770,406	-		Sama_2304	0.89	+1.1
2,770,406	-		Sama_2304	0.89	+0.4
2,770,410	-		Sama_2304	0.90	+1.2
2,770,410	-		Sama_2304	0.90	+1.7
2,770,410	-		Sama_2304	0.90	+1.7
2,770,520	-				-0.5
2,770,542	-				-0.9
2,770,542	-				+1.1
2,770,564	-				-1.6
2,770,564	-				-0.1
2,770,568	-				+1.2
2,770,568	-				-1.7
2,770,568	-				-0.4
2,770,568	-				-1.4
2,770,568	-				-0.2
2,770,631	+		Sama_2305	0.14	-1.4
2,770,678	-		Sama_2305	0.25	-1.7
2,770,679	+		Sama_2305	0.25	+0.2
2,770,679	+		Sama_2305	0.25	+1.1
2,770,680	-		Sama_2305	0.26	-0.9
2,770,680	-		Sama_2305	0.26	+0.5
2,770,748	+		Sama_2305	0.42	+0.4
2,770,748	+		Sama_2305	0.42	+0.4
2,770,749	-		Sama_2305	0.43	-0.6
2,770,749	-		Sama_2305	0.43	-0.1
2,770,749	-		Sama_2305	0.43	-0.1
2,770,749	-		Sama_2305	0.43	-1.1
2,770,757	+		Sama_2305	0.45	-1.4
2,770,757	+		Sama_2305	0.45	-1.6
2,770,757	+		Sama_2305	0.45	+0.7
2,770,758	-		Sama_2305	0.45	-0.8
2,770,758	-		Sama_2305	0.45	-1.3
2,770,758	-		Sama_2305	0.45	+1.3
2,770,758	-		Sama_2305	0.45	+0.2
2,770,758	-		Sama_2305	0.45	-0.7
2,770,758	-		Sama_2305	0.45	+0.6
2,770,758	-		Sama_2305	0.45	-1.6
2,770,855	-		Sama_2305	0.69	+1.6
2,770,855	-		Sama_2305	0.69	+0.9
2,770,881	-		Sama_2305	0.75	+0.3
2,770,881	-		Sama_2305	0.75	-0.8
2,770,895	+		Sama_2305	0.78	+1.1
2,770,896	-		Sama_2305	0.79	+0.9
2,770,896	-		Sama_2305	0.79	+0.8
2,770,896	-		Sama_2305	0.79	-0.7
2,770,977	-				+0.4
2,770,977	-				-0.5
2,770,977	-				-1.1
2,770,983	-				-0.5
2,770,983	-				+0.3
2,770,994	+				+0.5
2,770,994	+				-0.1
2,771,181	-				+1.1
2,771,201	-		Sama_2306	0.11	+0.4
2,771,201	-		Sama_2306	0.11	-0.5
2,771,348	-		Sama_2306	0.29	-0.3
2,771,377	+		Sama_2306	0.33	+2.7
2,771,378	-		Sama_2306	0.33	+0.6
2,771,393	-		Sama_2306	0.35	+0.5
2,771,393	-		Sama_2306	0.35	+0.7
2,771,393	-		Sama_2306	0.35	+0.2
2,771,393	-		Sama_2306	0.35	-0.2
2,771,393	-		Sama_2306	0.35	+1.4
2,771,447	-		Sama_2306	0.41	-0.3
2,771,447	-		Sama_2306	0.41	+1.1
2,771,453	-		Sama_2306	0.42	+0.8
2,771,601	-		Sama_2306	0.60	+1.1
2,771,601	-		Sama_2306	0.60	-0.5
2,771,601	-		Sama_2306	0.60	+0.5
2,771,639	-		Sama_2306	0.65	+0.9
2,771,714	-		Sama_2306	0.74	+0.4
2,771,714	-		Sama_2306	0.74	-0.2
2,771,735	-		Sama_2306	0.77	+0.5
2,771,913	-				+0.9
2,771,918	-				+0.1
2,771,918	-				+1.0
2,771,959	+				+0.1
2,771,959	+				+0.4
2,771,960	-				+0.6
2,771,987	+				+0.8
2,771,988	-				+0.8
2,771,988	-				+0.1
2,771,995	-				-0.1
2,771,999	+				-0.8
2,771,999	+				+0.2
2,772,000	-				+0.4
2,772,000	-				-0.6
2,772,000	-				+0.0
2,772,000	-				+0.4
2,772,000	-				+0.7
2,772,000	-				-0.2
2,772,001	+				-1.2
2,772,002	-				+0.6
2,772,002	-				-1.9
2,772,005	+				+1.8
2,772,006	-				+0.8
2,772,023	-				+2.1
2,772,029	+				+1.5
2,772,175	-				-2.2
2,772,175	-				-0.5
2,772,251	+				+0.5
2,772,304	+		Sama_2307	0.16	+0.0
2,772,356	-		Sama_2307	0.22	+0.1
2,772,356	-		Sama_2307	0.22	+1.7
2,772,356	-		Sama_2307	0.22	-1.4
2,772,356	-		Sama_2307	0.22	-0.1
2,772,463	+		Sama_2307	0.35	+0.2
2,772,464	-		Sama_2307	0.35	-2.3
2,772,464	-		Sama_2307	0.35	+0.1
2,772,464	-		Sama_2307	0.35	-0.3
2,772,464	-		Sama_2307	0.35	+0.9
2,772,464	-		Sama_2307	0.35	+0.2
2,772,464	-		Sama_2307	0.35	-1.5
2,772,467	+		Sama_2307	0.35	+1.1
2,772,467	+		Sama_2307	0.35	-1.4
2,772,467	+		Sama_2307	0.35	+0.1
2,772,468	-		Sama_2307	0.36	-2.0
2,772,468	-		Sama_2307	0.36	+0.3
2,772,468	-		Sama_2307	0.36	-0.8
2,772,468	-		Sama_2307	0.36	-0.3
2,772,468	-		Sama_2307	0.36	-1.5
2,772,468	-		Sama_2307	0.36	+1.3
2,772,468	-		Sama_2307	0.36	-2.8
2,772,473	+		Sama_2307	0.36	+0.4
2,772,474	-		Sama_2307	0.36	+0.9
2,772,474	-		Sama_2307	0.36	+0.7
2,772,474	-		Sama_2307	0.36	-0.9
2,772,474	-		Sama_2307	0.36	-0.7
2,772,520	+		Sama_2307	0.42	-0.8
2,772,521	-		Sama_2307	0.42	-0.9
2,772,521	-		Sama_2307	0.42	+0.5
2,772,524	-		Sama_2307	0.42	+0.4
2,772,524	-		Sama_2307	0.42	-0.1
2,772,599	-		Sama_2307	0.51	+1.1
2,772,599	-		Sama_2307	0.51	+1.2
2,772,617	-		Sama_2307	0.54	+1.6
2,772,617	-		Sama_2307	0.54	-0.3
2,772,785	-		Sama_2307	0.74	-0.3
2,772,799	+		Sama_2307	0.76	-1.1
2,772,800	-		Sama_2307	0.76	-0.9
2,772,800	-		Sama_2307	0.76	+0.2