Strain Fitness in Shewanella amazonensis SB2B around Sama_2191

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
2,648,134	-				-0.4
2,648,143	-				-0.2
2,648,143	-				-1.5
2,648,151	+				-0.2
2,648,151	+				-0.3
2,648,152	-				-0.0
2,648,152	-				+0.3
2,648,254	-	secF	Sama_2190	0.11	-0.5
2,648,254	-	secF	Sama_2190	0.11	-1.2
2,648,266	-	secF	Sama_2190	0.12	-2.9
2,648,266	-	secF	Sama_2190	0.12	-0.5
2,648,381	-	secF	Sama_2190	0.24	-2.1
2,648,480	-	secF	Sama_2190	0.35	-1.7
2,648,480	-	secF	Sama_2190	0.35	-1.9
2,648,644	-	secF	Sama_2190	0.52	+0.1
2,649,138	-				-1.5
2,649,386	-	secD	Sama_2191	0.15	-1.9
2,649,545	-	secD	Sama_2191	0.23	-1.1
2,649,548	-	secD	Sama_2191	0.24	-0.9
2,649,548	-	secD	Sama_2191	0.24	-1.5
2,649,780	-	secD	Sama_2191	0.36	-2.2
2,649,780	-	secD	Sama_2191	0.36	-3.0
2,649,822	-	secD	Sama_2191	0.38	-2.2
2,649,842	-	secD	Sama_2191	0.39	-2.7
2,649,842	-	secD	Sama_2191	0.39	-1.2
2,649,842	-	secD	Sama_2191	0.39	-0.9
2,650,304	-	secD	Sama_2191	0.64	-0.1
2,650,304	-	secD	Sama_2191	0.64	-1.9
2,650,330	-	secD	Sama_2191	0.66	-2.7
2,650,476	-	secD	Sama_2191	0.74	+1.1
2,650,895	-				-2.5
2,651,344	-				-1.4
2,651,344	-				+0.1
2,651,352	-				+0.8
2,651,383	-				-1.9
2,651,383	-				-1.9
2,651,383	-				-1.1
2,651,383	-				-0.7
2,651,383	-				-0.2
2,651,406	-				-2.8
2,651,458	-	tgt	Sama_2193	0.10	-1.5
2,651,477	-	tgt	Sama_2193	0.12	-3.5
2,651,551	+	tgt	Sama_2193	0.19	-1.5
2,651,554	-	tgt	Sama_2193	0.19	+1.7
2,651,567	-	tgt	Sama_2193	0.20	-1.7
2,651,670	-	tgt	Sama_2193	0.29	-1.2
2,651,742	+	tgt	Sama_2193	0.36	-0.9
2,651,839	-	tgt	Sama_2193	0.44	-1.5
2,651,895	+	tgt	Sama_2193	0.49	-1.7
2,651,896	-	tgt	Sama_2193	0.49	-2.2
2,651,896	-	tgt	Sama_2193	0.49	-2.6