Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_2151 and Sama_2152 are separated by 178 nucleotides Sama_2152 and Sama_2153 are separated by 5 nucleotides
Sama_2151: Sama_2151 - hypothetical protein (RefSeq), at 2,597,618 to 2,600,431
_2151
Sama_2152: Sama_2152 - aspartate-semialdehyde dehydrogenase (RefSeq), at 2,600,610 to 2,601,626
_2152
Sama_2153: Sama_2153 - erythronate-4-phosphate dehydrogenase (RefSeq), at 2,601,632 to 2,602,759
_2153
Position (kb)
2600
2601
2602 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2599.625 kb on - strand, within Sama_2151 at 2599.630 kb on + strand, within Sama_2151 at 2599.631 kb on - strand, within Sama_2151 at 2599.631 kb on - strand, within Sama_2151 at 2599.631 kb on - strand, within Sama_2151 at 2599.631 kb on - strand, within Sama_2151 at 2599.631 kb on - strand, within Sama_2151 at 2599.631 kb on - strand, within Sama_2151 at 2599.631 kb on - strand, within Sama_2151 at 2599.717 kb on + strand, within Sama_2151 at 2599.838 kb on + strand, within Sama_2151 at 2599.866 kb on - strand, within Sama_2151 at 2599.866 kb on - strand, within Sama_2151 at 2599.866 kb on - strand, within Sama_2151 at 2599.866 kb on - strand, within Sama_2151 at 2599.866 kb on - strand, within Sama_2151 at 2599.866 kb on - strand, within Sama_2151 at 2599.910 kb on + strand, within Sama_2151 at 2599.910 kb on + strand, within Sama_2151 at 2599.911 kb on - strand, within Sama_2151 at 2599.911 kb on - strand, within Sama_2151 at 2599.946 kb on - strand, within Sama_2151 at 2599.991 kb on - strand, within Sama_2151 at 2600.102 kb on + strand, within Sama_2151 at 2600.102 kb on + strand, within Sama_2151 at 2600.102 kb on + strand, within Sama_2151 at 2600.102 kb on + strand, within Sama_2151 at 2600.102 kb on + strand, within Sama_2151 at 2600.103 kb on - strand, within Sama_2151 at 2600.103 kb on - strand, within Sama_2151 at 2600.103 kb on - strand, within Sama_2151 at 2600.103 kb on - strand, within Sama_2151 at 2600.126 kb on + strand, within Sama_2151 at 2600.146 kb on + strand, within Sama_2151 at 2600.147 kb on - strand, within Sama_2151 at 2600.151 kb on + strand at 2600.151 kb on + strand at 2600.151 kb on + strand at 2600.152 kb on - strand at 2600.152 kb on - strand at 2600.152 kb on - strand at 2600.152 kb on - strand at 2600.152 kb on - strand at 2600.187 kb on + strand at 2600.188 kb on - strand at 2600.209 kb on - strand at 2600.273 kb on - strand at 2600.275 kb on + strand at 2600.276 kb on - strand at 2600.276 kb on - strand at 2600.276 kb on - strand at 2600.283 kb on + strand at 2600.283 kb on + strand at 2600.284 kb on - strand at 2600.284 kb on - strand at 2600.412 kb on + strand at 2600.437 kb on - strand at 2600.492 kb on - strand at 2600.508 kb on - strand at 2600.612 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,599,625 - Sama_2151 0.71 +0.7 2,599,630 + Sama_2151 0.71 -0.0 2,599,631 - Sama_2151 0.72 +0.7 2,599,631 - Sama_2151 0.72 +0.5 2,599,631 - Sama_2151 0.72 +1.3 2,599,631 - Sama_2151 0.72 +1.4 2,599,631 - Sama_2151 0.72 -0.6 2,599,631 - Sama_2151 0.72 +1.3 2,599,631 - Sama_2151 0.72 +2.1 2,599,717 + Sama_2151 0.75 +0.4 2,599,838 + Sama_2151 0.79 -0.0 2,599,866 - Sama_2151 0.80 +1.6 2,599,866 - Sama_2151 0.80 +0.1 2,599,866 - Sama_2151 0.80 -0.1 2,599,866 - Sama_2151 0.80 +1.4 2,599,866 - Sama_2151 0.80 +1.2 2,599,866 - Sama_2151 0.80 +1.8 2,599,910 + Sama_2151 0.81 +0.6 2,599,910 + Sama_2151 0.81 +1.2 2,599,911 - Sama_2151 0.81 +0.9 2,599,911 - Sama_2151 0.81 +1.6 2,599,946 - Sama_2151 0.83 +0.8 2,599,991 - Sama_2151 0.84 +0.3 2,600,102 + Sama_2151 0.88 +0.8 2,600,102 + Sama_2151 0.88 +1.2 2,600,102 + Sama_2151 0.88 +1.2 2,600,102 + Sama_2151 0.88 -0.5 2,600,102 + Sama_2151 0.88 +0.4 2,600,103 - Sama_2151 0.88 +1.5 2,600,103 - Sama_2151 0.88 +0.6 2,600,103 - Sama_2151 0.88 -2.5 2,600,103 - Sama_2151 0.88 +0.4 2,600,126 + Sama_2151 0.89 +0.5 2,600,146 + Sama_2151 0.90 +1.1 2,600,147 - Sama_2151 0.90 +0.7 2,600,151 + +1.7 2,600,151 + +0.6 2,600,151 + +0.8 2,600,152 - -0.2 2,600,152 - +0.3 2,600,152 - -0.4 2,600,152 - +0.2 2,600,152 - +1.1 2,600,187 + +1.5 2,600,188 - +1.5 2,600,209 - -1.1 2,600,273 - +1.3 2,600,275 + -0.3 2,600,276 - +0.8 2,600,276 - +1.9 2,600,276 - +2.4 2,600,283 + +0.7 2,600,283 + -2.5 2,600,284 - -0.3 2,600,284 - +2.6 2,600,412 + +1.4 2,600,437 - -0.9 2,600,492 - -0.4 2,600,508 - +0.3 2,600,612 - +0.7
Or see this region's nucleotide sequence