Strain Fitness in Shewanella amazonensis SB2B around Sama_1850

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
2,252,274	+				+0.2
2,252,293	+				+0.9
2,252,293	+				+0.3
2,252,378	+				+1.5
2,252,543	-		Sama_1849	0.26	+0.5
2,252,606	+		Sama_1849	0.32	+0.8
2,252,665	+		Sama_1849	0.38	+0.5
2,252,665	+		Sama_1849	0.38	+0.6
2,252,665	+		Sama_1849	0.38	+0.2
2,252,665	+		Sama_1849	0.38	+0.7
2,252,670	+		Sama_1849	0.39	+1.6
2,252,725	+		Sama_1849	0.45	+0.7
2,252,725	+		Sama_1849	0.45	+0.7
2,252,759	+		Sama_1849	0.48	+1.8
2,252,759	+		Sama_1849	0.48	+0.7
2,252,759	+		Sama_1849	0.48	+0.9
2,252,830	+		Sama_1849	0.56	+0.5
2,252,902	+		Sama_1849	0.63	+1.7
2,252,902	+		Sama_1849	0.63	-2.1
2,252,902	+		Sama_1849	0.63	+1.7
2,253,058	+		Sama_1849	0.80	+0.3
2,253,099	+		Sama_1849	0.84	+0.2
2,253,160	+				+1.6
2,253,160	+				+1.8
2,253,216	-				+1.5
2,253,437	+		Sama_1850	0.13	-1.1
2,253,437	+		Sama_1850	0.13	+0.8
2,253,437	+		Sama_1850	0.13	-0.4
2,253,437	+		Sama_1850	0.13	-1.0
2,253,437	+		Sama_1850	0.13	-1.3
2,253,439	+		Sama_1850	0.13	-2.2
2,253,439	+		Sama_1850	0.13	-0.7
2,253,440	-		Sama_1850	0.13	+0.5
2,253,459	+		Sama_1850	0.15	-0.1
2,253,502	+		Sama_1850	0.17	-2.5
2,253,627	+		Sama_1850	0.25	-1.4
2,253,628	-		Sama_1850	0.25	+0.3
2,253,629	+		Sama_1850	0.25	-1.7
2,254,052	-		Sama_1850	0.50	+0.4
2,254,112	-		Sama_1850	0.54	-0.2
2,254,132	+		Sama_1850	0.55	-2.2
2,254,133	-		Sama_1850	0.55	+0.9
2,254,169	+		Sama_1850	0.57	-1.7
2,254,178	-		Sama_1850	0.58	+0.1
2,254,370	+		Sama_1850	0.69	-0.9
2,254,370	+		Sama_1850	0.69	-1.0
2,254,370	+		Sama_1850	0.69	-2.4
2,254,381	+		Sama_1850	0.70	-1.7
2,254,382	-		Sama_1850	0.70	-2.2
2,254,542	+		Sama_1850	0.80	-0.2
2,254,543	-		Sama_1850	0.80	-0.9
2,254,594	+		Sama_1850	0.83	-1.8
2,254,594	+		Sama_1850	0.83	-0.3
2,254,595	-		Sama_1850	0.83	-0.4
2,254,655	+		Sama_1850	0.86	-0.7
2,254,655	+		Sama_1850	0.86	-1.7
2,254,655	+		Sama_1850	0.86	+0.3
2,254,660	+		Sama_1850	0.87	+0.4
2,254,661	-		Sama_1850	0.87	-0.4
2,254,724	+				-1.8
2,254,725	-				+0.4
2,254,833	+				-0.2
2,254,853	-				-0.6
2,254,853	-				+0.4
2,254,853	-				+0.9
2,254,881	+				-0.2
2,254,881	+				-0.4
2,254,881	+				-0.3
2,254,898	+				-0.1
2,254,898	+				-0.8
2,254,898	+				-0.7
2,254,899	-				+0.5
2,254,917	-				-0.2
2,254,992	+		Sama_1851	0.11	-1.1
2,255,072	-		Sama_1851	0.18	-0.4
2,255,078	+		Sama_1851	0.18	+0.4
2,255,078	+		Sama_1851	0.18	-2.2
2,255,079	-		Sama_1851	0.18	-0.4
2,255,086	+		Sama_1851	0.19	+1.9
2,255,086	+		Sama_1851	0.19	+0.9
2,255,087	-		Sama_1851	0.19	-0.8
2,255,087	-		Sama_1851	0.19	+0.6
2,255,087	-		Sama_1851	0.19	-0.6
2,255,110	+		Sama_1851	0.21	+0.3
2,255,110	+		Sama_1851	0.21	+0.5
2,255,111	-		Sama_1851	0.21	-0.6
2,255,164	+		Sama_1851	0.26	+0.9
2,255,165	-		Sama_1851	0.26	+0.8
2,255,165	-		Sama_1851	0.26	+0.4
2,255,193	+		Sama_1851	0.28	+0.4
2,255,304	-		Sama_1851	0.38	-0.4
2,255,378	+		Sama_1851	0.44	+0.4
2,255,394	+		Sama_1851	0.45	-0.5
2,255,395	-		Sama_1851	0.45	+0.5
2,255,395	-		Sama_1851	0.45	-0.8
2,255,452	+		Sama_1851	0.50	+0.9
2,255,452	+		Sama_1851	0.50	-0.4
2,255,452	+		Sama_1851	0.50	+0.4
2,255,452	+		Sama_1851	0.50	+0.0
2,255,452	+		Sama_1851	0.50	-0.3
2,255,452	+		Sama_1851	0.50	-0.1
2,255,452	+		Sama_1851	0.50	+0.6
2,255,458	+		Sama_1851	0.51	+0.2
2,255,488	+		Sama_1851	0.53	+0.1
2,255,488	+		Sama_1851	0.53	-2.5
2,255,515	-		Sama_1851	0.56	+0.7
2,255,525	-		Sama_1851	0.57	-0.3
2,255,597	+		Sama_1851	0.63	-1.1
2,255,598	-		Sama_1851	0.63	+0.5
2,255,598	-		Sama_1851	0.63	+0.8
2,255,662	+		Sama_1851	0.68	-0.3
2,255,773	-		Sama_1851	0.78	+0.9
2,255,792	+		Sama_1851	0.80	+0.0
2,255,792	+		Sama_1851	0.80	+1.5
2,255,792	+		Sama_1851	0.80	+0.9