Strain Fitness in Shewanella amazonensis SB2B around Sama_1452

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,762,678	+		Sama_1451	0.60	-0.4
1,762,679	-		Sama_1451	0.60	-1.1
1,762,679	-		Sama_1451	0.60	-1.1
1,762,723	-		Sama_1451	0.62	-2.1
1,762,778	+		Sama_1451	0.64	+0.2
1,762,811	+		Sama_1451	0.66	-0.1
1,762,811	+		Sama_1451	0.66	+1.0
1,762,811	+		Sama_1451	0.66	-1.5
1,762,812	-		Sama_1451	0.66	-1.5
1,762,812	-		Sama_1451	0.66	+1.8
1,762,857	-		Sama_1451	0.68	+0.6
1,762,914	+		Sama_1451	0.70	+1.8
1,762,914	+		Sama_1451	0.70	-0.6
1,762,914	+		Sama_1451	0.70	-1.7
1,762,934	+		Sama_1451	0.71	-1.4
1,762,935	-		Sama_1451	0.71	+0.0
1,762,935	-		Sama_1451	0.71	+0.7
1,762,935	-		Sama_1451	0.71	-1.8
1,763,086	-		Sama_1451	0.78	+0.0
1,763,152	-		Sama_1451	0.81	+0.4
1,763,175	+		Sama_1451	0.82	-0.3
1,763,175	+		Sama_1451	0.82	-1.0
1,763,175	+		Sama_1451	0.82	-0.7
1,763,182	-		Sama_1451	0.83	-1.1
1,763,189	+		Sama_1451	0.83	-0.9
1,763,194	-		Sama_1451	0.83	-1.6
1,763,325	+		Sama_1451	0.89	+0.5
1,763,326	-		Sama_1451	0.89	-2.3
1,763,328	+		Sama_1451	0.89	+0.4
1,763,328	+		Sama_1451	0.89	-0.6
1,763,329	-		Sama_1451	0.89	+0.6
1,763,329	-		Sama_1451	0.89	-0.7
1,763,361	+				-1.2
1,763,361	+				-0.3
1,763,361	+				+0.0
1,763,361	+				-1.7
1,763,362	-				-2.0
1,763,399	+				-0.6
1,763,412	+				+1.7
1,763,412	+				-3.5
1,763,412	+				-1.4
1,763,412	+				+1.7
1,763,412	+				-1.7
1,763,412	+				-0.2
1,763,413	-				-1.5
1,763,445	+				+2.4
1,763,505	+				-0.1
1,763,505	+				+2.2
1,763,505	+				-1.9
1,763,505	+				-2.4
1,763,505	+				+0.3
1,763,505	+				-2.7
1,763,505	+				-0.7
1,763,507	+				-2.4
1,763,507	+				+0.4
1,763,563	-				-0.4
1,763,624	+				+0.6
1,763,624	+				-0.8
1,763,624	+				+1.4
1,763,624	+				-2.6
1,763,624	+				-1.3
1,763,624	+				+0.4
1,763,624	+				-1.7
1,763,625	-				-1.3
1,763,625	-				-0.7
1,763,625	-				-0.7
1,763,625	-				+0.7
1,763,656	+		Sama_1452	0.11	-2.1
1,763,656	+		Sama_1452	0.11	+0.0
1,763,656	+		Sama_1452	0.11	-0.6
1,763,657	-		Sama_1452	0.12	-2.3
1,763,657	-		Sama_1452	0.12	+1.0
1,763,657	-		Sama_1452	0.12	-1.5
1,763,671	-		Sama_1452	0.17	+0.0
1,763,671	-		Sama_1452	0.17	+0.0
1,763,674	+		Sama_1452	0.18	+0.0
1,763,674	+		Sama_1452	0.18	-0.7
1,763,674	+		Sama_1452	0.18	+0.7
1,763,675	-		Sama_1452	0.19	-2.3
1,763,675	-		Sama_1452	0.19	-0.6
1,763,697	+		Sama_1452	0.27	+1.9
1,763,759	+		Sama_1452	0.50	-1.0
1,763,759	+		Sama_1452	0.50	+0.8
1,763,770	+		Sama_1452	0.55	-1.4
1,763,770	+		Sama_1452	0.55	+0.4
1,763,771	-		Sama_1452	0.55	-0.4
1,763,868	+				-0.9
1,763,887	+				-1.6
1,764,001	+		Sama_1453	0.17	+0.7
1,764,005	+		Sama_1453	0.17	+0.4
1,764,005	+		Sama_1453	0.17	-3.3
1,764,006	-		Sama_1453	0.17	-1.7
1,764,006	-		Sama_1453	0.17	-0.1
1,764,067	+		Sama_1453	0.27	-0.6
1,764,067	+		Sama_1453	0.27	-0.1
1,764,067	+		Sama_1453	0.27	-1.1
1,764,068	-		Sama_1453	0.27	+0.8
1,764,068	-		Sama_1453	0.27	-2.1
1,764,121	+		Sama_1453	0.35	+1.4
1,764,121	+		Sama_1453	0.35	+0.3
1,764,121	+		Sama_1453	0.35	-0.9
1,764,122	-		Sama_1453	0.35	-1.0
1,764,124	+		Sama_1453	0.36	-2.0
1,764,124	+		Sama_1453	0.36	-0.3
1,764,124	+		Sama_1453	0.36	-2.0
1,764,125	-		Sama_1453	0.36	+0.2
1,764,125	-		Sama_1453	0.36	-1.3
1,764,142	+		Sama_1453	0.38	+0.5
1,764,142	+		Sama_1453	0.38	-1.3
1,764,143	-		Sama_1453	0.39	-1.8
1,764,183	+		Sama_1453	0.45	-1.3
1,764,183	+		Sama_1453	0.45	-0.5
1,764,183	+		Sama_1453	0.45	+0.0
1,764,183	+		Sama_1453	0.45	-0.6
1,764,183	+		Sama_1453	0.45	-1.4
1,764,184	-		Sama_1453	0.45	+0.7
1,764,204	+		Sama_1453	0.48	-0.4
1,764,225	+		Sama_1453	0.51	-0.2
1,764,226	-		Sama_1453	0.51	-0.9
1,764,276	+		Sama_1453	0.59	-1.1
1,764,373	+		Sama_1453	0.74	-1.0
1,764,373	+		Sama_1453	0.74	-1.3
1,764,374	-		Sama_1453	0.74	-1.6
1,764,386	+		Sama_1453	0.76	-0.6
1,764,386	+		Sama_1453	0.76	-0.6
1,764,386	+		Sama_1453	0.76	-1.3
1,764,386	+		Sama_1453	0.76	-1.0
1,764,386	+		Sama_1453	0.76	-2.6
1,764,386	+		Sama_1453	0.76	+0.3
1,764,386	+		Sama_1453	0.76	-1.4
1,764,386	+		Sama_1453	0.76	-1.5
1,764,387	-		Sama_1453	0.76	-0.7
1,764,387	-		Sama_1453	0.76	-0.9
1,764,403	+		Sama_1453	0.79	+0.0
1,764,403	+		Sama_1453	0.79	-0.7
1,764,404	-		Sama_1453	0.79	-0.7
1,764,404	-		Sama_1453	0.79	-0.7
1,764,409	+		Sama_1453	0.80	+0.8
1,764,455	-		Sama_1453	0.87	-0.8
1,764,486	-				-0.1
1,764,531	+				+0.1
1,764,689	+		Sama_1454	0.15	+0.6
1,764,852	+		Sama_1454	0.31	-0.7
1,764,853	-		Sama_1454	0.31	-1.9
1,764,865	+		Sama_1454	0.32	+0.2
1,764,865	+		Sama_1454	0.32	-2.4
1,764,866	-		Sama_1454	0.32	-0.1