Strain Fitness in Shewanella amazonensis SB2B around Sama_1383

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,673,000	-	fabG	Sama_1381	0.34	+0.3
1,673,012	+	fabG	Sama_1381	0.35	-1.1
1,673,012	+	fabG	Sama_1381	0.35	+0.8
1,673,066	+	fabG	Sama_1381	0.43	-1.1
1,673,066	+	fabG	Sama_1381	0.43	-0.9
1,673,066	+	fabG	Sama_1381	0.43	-1.7
1,673,066	+	fabG	Sama_1381	0.43	+0.1
1,673,066	+	fabG	Sama_1381	0.43	-0.0
1,673,066	+	fabG	Sama_1381	0.43	+1.0
1,673,066	+	fabG	Sama_1381	0.43	-0.1
1,673,067	-	fabG	Sama_1381	0.43	-0.9
1,673,067	-	fabG	Sama_1381	0.43	+0.1
1,673,067	-	fabG	Sama_1381	0.43	-0.2
1,673,067	-	fabG	Sama_1381	0.43	+0.5
1,673,067	-	fabG	Sama_1381	0.43	+0.5
1,673,067	-	fabG	Sama_1381	0.43	-1.3
1,673,183	+	fabG	Sama_1381	0.58	-0.1
1,673,184	-	fabG	Sama_1381	0.58	+0.4
1,673,226	+	fabG	Sama_1381	0.64	+0.7
1,673,291	+	fabG	Sama_1381	0.72	+1.1
1,673,292	-	fabG	Sama_1381	0.72	+0.3
1,673,438	+				+2.2
1,673,454	+				+1.3
1,673,454	+				+0.1
1,673,454	+				+1.2
1,673,455	-				-0.1
1,673,455	-				-2.4
1,673,499	+				+0.1
1,673,500	-				-1.4
1,673,557	+				-2.0
1,673,558	-				+0.5
1,673,581	+				-1.3
1,673,581	+				-0.4
1,673,582	-				-3.1
1,673,582	-				-1.9
1,673,582	-				-2.0
1,673,582	-				-3.3
1,673,582	-				-4.0
1,673,815	+		Sama_1382	0.69	+0.1
1,673,815	+		Sama_1382	0.69	-0.9
1,673,815	+		Sama_1382	0.69	+1.2
1,673,815	+		Sama_1382	0.69	-0.3
1,673,815	+		Sama_1382	0.69	-1.0
1,673,815	+		Sama_1382	0.69	-1.5
1,673,815	+		Sama_1382	0.69	-1.3
1,673,815	+		Sama_1382	0.69	-0.5
1,673,815	+		Sama_1382	0.69	+0.5
1,673,816	-		Sama_1382	0.69	-3.7
1,673,816	-		Sama_1382	0.69	-2.2
1,673,879	+		Sama_1382	0.89	-2.3
1,673,899	-				-2.4
1,674,008	+				-2.4
1,674,094	+				-2.3
1,674,133	+				-2.8
1,674,133	+				-1.3
1,674,134	-				+0.4
1,674,184	+		Sama_1383	0.10	-2.3
1,674,251	+		Sama_1383	0.14	-2.1
1,674,251	+		Sama_1383	0.14	-1.7
1,674,260	+		Sama_1383	0.14	-2.5
1,674,260	+		Sama_1383	0.14	-3.6
1,674,261	-		Sama_1383	0.14	-0.9
1,674,263	+		Sama_1383	0.14	-3.3
1,674,264	-		Sama_1383	0.14	-2.3
1,674,276	+		Sama_1383	0.15	-3.5
1,674,276	+		Sama_1383	0.15	-1.5
1,674,276	+		Sama_1383	0.15	-1.7
1,674,276	+		Sama_1383	0.15	-1.7
1,674,277	-		Sama_1383	0.15	-2.6
1,674,301	+		Sama_1383	0.16	-3.3
1,674,302	-		Sama_1383	0.16	-2.7
1,674,326	+		Sama_1383	0.17	+0.1
1,674,327	-		Sama_1383	0.17	-3.9
1,674,462	+		Sama_1383	0.24	-2.0
1,674,462	+		Sama_1383	0.24	-2.0
1,674,462	+		Sama_1383	0.24	-1.8
1,674,463	-		Sama_1383	0.24	-1.6
1,674,589	-		Sama_1383	0.30	-2.3
1,674,603	+		Sama_1383	0.31	-1.9
1,674,604	-		Sama_1383	0.31	-2.6
1,674,604	-		Sama_1383	0.31	+0.2
1,674,639	+		Sama_1383	0.33	-1.8
1,674,710	+		Sama_1383	0.36	-1.9
1,674,775	+		Sama_1383	0.39	-1.8
1,674,776	-		Sama_1383	0.39	-1.8
1,674,776	-		Sama_1383	0.39	-2.4
1,674,780	+		Sama_1383	0.39	-2.9
1,674,780	+		Sama_1383	0.39	-1.5
1,674,781	-		Sama_1383	0.39	-2.1
1,674,791	-		Sama_1383	0.40	-1.9
1,674,897	+		Sama_1383	0.45	-1.3
1,674,897	+		Sama_1383	0.45	-2.8
1,674,897	+		Sama_1383	0.45	-1.3
1,674,897	+		Sama_1383	0.45	-2.8
1,674,898	-		Sama_1383	0.45	-1.3
1,674,898	-		Sama_1383	0.45	-1.3
1,674,898	-		Sama_1383	0.45	-0.7
1,674,898	-		Sama_1383	0.45	-0.9
1,674,898	-		Sama_1383	0.45	-0.8
1,674,898	-		Sama_1383	0.45	-2.5
1,674,898	-		Sama_1383	0.45	-1.8
1,674,898	-		Sama_1383	0.45	-3.2
1,674,898	-		Sama_1383	0.45	-1.1
1,674,901	+		Sama_1383	0.45	-1.9
1,674,901	+		Sama_1383	0.45	-1.9
1,674,901	+		Sama_1383	0.45	-3.5
1,674,902	-		Sama_1383	0.45	-2.1
1,674,918	+		Sama_1383	0.46	-0.5
1,674,937	+		Sama_1383	0.47	-2.3
1,674,937	+		Sama_1383	0.47	-2.3
1,674,937	+		Sama_1383	0.47	-2.8
1,674,937	+		Sama_1383	0.47	-1.3
1,674,937	+		Sama_1383	0.47	-1.1
1,674,937	+		Sama_1383	0.47	-1.6
1,674,937	+		Sama_1383	0.47	-1.9
1,674,938	-		Sama_1383	0.47	-2.0
1,674,938	-		Sama_1383	0.47	-2.5
1,674,938	-		Sama_1383	0.47	-1.3
1,674,941	+		Sama_1383	0.47	-0.7
1,674,941	+		Sama_1383	0.47	+0.3
1,674,941	+		Sama_1383	0.47	-3.6
1,674,941	+		Sama_1383	0.47	-2.8
1,674,941	+		Sama_1383	0.47	-2.9
1,674,941	+		Sama_1383	0.47	-1.5
1,674,941	+		Sama_1383	0.47	+0.5
1,674,941	+		Sama_1383	0.47	-2.9
1,674,941	+		Sama_1383	0.47	-1.4
1,674,941	+		Sama_1383	0.47	-3.6
1,674,941	+		Sama_1383	0.47	-2.4
1,674,941	+		Sama_1383	0.47	-0.9
1,674,941	+		Sama_1383	0.47	-1.6
1,674,942	-		Sama_1383	0.47	-3.2
1,674,942	-		Sama_1383	0.47	-2.9
1,674,942	-		Sama_1383	0.47	-3.4
1,674,942	-		Sama_1383	0.47	-1.8
1,674,942	-		Sama_1383	0.47	+1.1
1,674,942	-		Sama_1383	0.47	-1.4
1,674,945	+		Sama_1383	0.47	-2.9
1,674,945	+		Sama_1383	0.47	-2.9
1,674,945	+		Sama_1383	0.47	-1.8
1,674,945	+		Sama_1383	0.47	-1.3
1,674,945	+		Sama_1383	0.47	-2.1
1,674,946	-		Sama_1383	0.47	-4.5
1,674,946	-		Sama_1383	0.47	-1.1
1,674,946	-		Sama_1383	0.47	-2.9
1,674,978	-		Sama_1383	0.49	-3.4
1,675,042	-		Sama_1383	0.52	-2.1
1,675,059	+		Sama_1383	0.53	-2.9
1,675,073	+		Sama_1383	0.54	+0.1
1,675,073	+		Sama_1383	0.54	-1.8
1,675,074	-		Sama_1383	0.54	-0.9
1,675,093	+		Sama_1383	0.55	-1.9
1,675,093	+		Sama_1383	0.55	-1.8
1,675,093	+		Sama_1383	0.55	-2.6
1,675,094	-		Sama_1383	0.55	-1.9
1,675,095	+		Sama_1383	0.55	-2.4
1,675,161	+		Sama_1383	0.58	-1.5
1,675,161	+		Sama_1383	0.58	-0.2
1,675,204	-		Sama_1383	0.60	-2.7
1,675,220	-		Sama_1383	0.61	-2.6
1,675,225	+		Sama_1383	0.61	-2.3
1,675,248	+		Sama_1383	0.62	-1.5
1,675,325	-		Sama_1383	0.66	-2.4
1,675,342	+		Sama_1383	0.67	-0.5
1,675,412	-		Sama_1383	0.70	-2.5
1,675,427	-		Sama_1383	0.71	-0.9
1,675,567	+		Sama_1383	0.78	-0.8
1,675,581	+		Sama_1383	0.78	-2.5
1,675,581	+		Sama_1383	0.78	-1.1
1,675,607	+		Sama_1383	0.80	-1.9
1,675,617	-		Sama_1383	0.80	-1.9
1,675,617	-		Sama_1383	0.80	-2.1
1,675,641	+		Sama_1383	0.81	-4.0
1,675,740	+		Sama_1383	0.86	-2.3
1,675,740	+		Sama_1383	0.86	-1.3
1,675,741	-		Sama_1383	0.86	-2.7
1,675,741	-		Sama_1383	0.86	-2.7
1,675,741	-		Sama_1383	0.86	-1.0
1,675,751	+		Sama_1383	0.87	-1.3
1,675,751	+		Sama_1383	0.87	-3.5
1,675,752	-		Sama_1383	0.87	-0.1
1,675,787	+		Sama_1383	0.88	-1.1
1,675,913	-				-1.8
1,675,927	+				-2.3
1,676,019	+				+1.0
1,676,026	+				-0.5
1,676,026	+				-1.5
1,676,026	+				+0.4
1,676,027	-				-1.9
1,676,027	-				-0.5
1,676,027	-				-1.0
1,676,039	-				-0.6
1,676,051	-				-0.5
1,676,124	+				+1.0
1,676,124	+				-1.8
1,676,124	+				+1.6
1,676,125	-				+0.3
1,676,296	-		Sama_1384	0.25	-0.5
1,676,303	+		Sama_1384	0.26	+1.4
1,676,303	+		Sama_1384	0.26	-1.0
1,676,303	+		Sama_1384	0.26	-1.1
1,676,304	-		Sama_1384	0.27	+0.6
1,676,304	-		Sama_1384	0.27	-0.5
1,676,304	-		Sama_1384	0.27	+0.3
1,676,304	-		Sama_1384	0.27	-0.3
1,676,358	-		Sama_1384	0.35	-0.7
1,676,368	+		Sama_1384	0.36	+1.0
1,676,368	+		Sama_1384	0.36	+0.2
1,676,369	-		Sama_1384	0.36	-1.0
1,676,369	-		Sama_1384	0.36	-0.3
1,676,382	+		Sama_1384	0.38	-2.4
1,676,383	-		Sama_1384	0.38	-1.3
1,676,422	+		Sama_1384	0.44	+0.6
1,676,422	+		Sama_1384	0.44	-1.1
1,676,423	-		Sama_1384	0.44	+1.2
1,676,423	-		Sama_1384	0.44	+0.3
1,676,424	+		Sama_1384	0.44	+0.2
1,676,424	+		Sama_1384	0.44	-0.6
1,676,424	+		Sama_1384	0.44	+0.0
1,676,425	-		Sama_1384	0.44	-1.4
1,676,425	-		Sama_1384	0.44	+1.1
1,676,425	-		Sama_1384	0.44	-0.3
1,676,425	-		Sama_1384	0.44	-0.2
1,676,425	-		Sama_1384	0.44	+1.0
1,676,429	+		Sama_1384	0.45	+1.4
1,676,430	-		Sama_1384	0.45	-1.5
1,676,430	-		Sama_1384	0.45	-0.5
1,676,487	+		Sama_1384	0.53	+0.7
1,676,601	+		Sama_1384	0.70	-1.9
1,676,647	-		Sama_1384	0.77	-0.6
1,676,649	+		Sama_1384	0.77	+0.6
1,676,649	+		Sama_1384	0.77	+0.8
1,676,649	+		Sama_1384	0.77	+1.0
1,676,650	-		Sama_1384	0.77	-2.8
1,676,650	-		Sama_1384	0.77	+0.2
1,676,650	-		Sama_1384	0.77	+1.5
1,676,655	+		Sama_1384	0.78	-0.5
1,676,655	+		Sama_1384	0.78	-2.3
1,676,737	+				+1.0
1,676,803	+				+0.6
1,676,804	-				-1.0
1,676,820	-				-0.8
1,676,820	-				+0.6
1,676,894	+				+1.6
1,676,950	-		Sama_1385	0.14	-0.2
1,676,966	+		Sama_1385	0.17	-0.8