Strain Fitness in Shewanella amazonensis SB2B around Sama_1322

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,608,199	+		Sama_1321	0.53	+0.2
1,608,200	-		Sama_1321	0.53	-0.9
1,608,222	+		Sama_1321	0.54	-0.5
1,608,223	-		Sama_1321	0.54	-0.7
1,608,244	+		Sama_1321	0.56	+1.4
1,608,359	-		Sama_1321	0.65	+0.4
1,608,387	+		Sama_1321	0.67	-0.8
1,608,388	-		Sama_1321	0.67	+1.1
1,608,388	-		Sama_1321	0.67	-1.5
1,608,388	-		Sama_1321	0.67	-0.8
1,608,388	-		Sama_1321	0.67	-0.9
1,608,388	-		Sama_1321	0.67	+0.5
1,608,388	-		Sama_1321	0.67	-1.7
1,608,388	-		Sama_1321	0.67	+1.2
1,608,388	-		Sama_1321	0.67	+0.5
1,608,388	-		Sama_1321	0.67	-0.3
1,608,389	+		Sama_1321	0.67	+0.2
1,608,389	+		Sama_1321	0.67	-0.9
1,608,389	+		Sama_1321	0.67	-0.5
1,608,390	-		Sama_1321	0.67	+0.3
1,608,390	-		Sama_1321	0.67	+0.5
1,608,392	+		Sama_1321	0.67	-0.0
1,608,393	-		Sama_1321	0.67	-2.6
1,608,393	-		Sama_1321	0.67	-0.6
1,608,393	-		Sama_1321	0.67	+0.6
1,608,516	-		Sama_1321	0.76	-0.8
1,608,516	-		Sama_1321	0.76	+2.2
1,608,516	-		Sama_1321	0.76	+0.9
1,608,617	+		Sama_1321	0.84	-0.1
1,608,617	+		Sama_1321	0.84	-0.5
1,608,617	+		Sama_1321	0.84	-2.2
1,608,618	-		Sama_1321	0.84	-1.7
1,608,618	-		Sama_1321	0.84	-0.3
1,608,618	-		Sama_1321	0.84	-0.4
1,608,624	-		Sama_1321	0.84	+0.0
1,608,650	+		Sama_1321	0.86	+0.8
1,608,650	+		Sama_1321	0.86	-0.7
1,608,650	+		Sama_1321	0.86	-0.4
1,608,650	+		Sama_1321	0.86	+0.3
1,608,650	+		Sama_1321	0.86	-3.7
1,608,650	+		Sama_1321	0.86	+0.4
1,608,651	-		Sama_1321	0.87	-0.3
1,608,651	-		Sama_1321	0.87	+1.1
1,608,651	-		Sama_1321	0.87	-0.9
1,608,778	+				+0.1
1,608,779	-				+0.6
1,608,779	-				-0.1
1,608,788	+				-1.0
1,608,896	+				-0.9
1,608,897	-				+0.9
1,608,966	+				-0.3
1,608,970	+				+1.6
1,608,970	+				-1.4
1,608,970	+				+0.8
1,608,970	+				+0.1
1,608,971	-				+0.1
1,608,971	-				-0.3
1,608,971	-				+1.1
1,608,971	-				+0.6
1,608,971	-				+1.4
1,609,000	-				+0.1
1,609,000	-				-0.4
1,609,003	-				+0.1
1,609,010	-				-0.1
1,609,046	-				+0.9
1,609,053	-				+1.7
1,609,076	+				-0.0
1,609,076	+				+0.1
1,609,076	+				-1.2
1,609,115	+				-0.2
1,609,115	+				-0.5
1,609,117	+				-2.4
1,609,117	+				-0.5
1,609,117	+				+0.1
1,609,117	+				-1.7
1,609,117	+				-0.4
1,609,117	+				+0.8
1,609,117	+				-0.9
1,609,117	+				-0.7
1,609,117	+				+1.1
1,609,117	+				+0.7
1,609,117	+				-0.9
1,609,117	+				-2.1
1,609,117	+				-0.4
1,609,117	+				-0.9
1,609,117	+				-1.5
1,609,117	+				-0.1
1,609,117	+				+0.4
1,609,117	+				+0.2
1,609,117	+				+0.1
1,609,117	+				+0.1
1,609,117	+				-1.9
1,609,117	+				+1.5
1,609,117	+				-0.5
1,609,117	+				-1.2
1,609,117	+				+0.1
1,609,117	+				-0.9
1,609,117	+				+0.4
1,609,117	+				+0.9
1,609,119	+				-0.4
1,609,119	+				-0.5
1,609,119	+				-0.8
1,609,119	+				+0.7
1,611,410	+		Sama_1322	0.86	-0.5
1,611,455	+		Sama_1322	0.87	-1.9
1,611,455	+		Sama_1322	0.87	-1.7
1,611,455	+		Sama_1322	0.87	-1.7
1,611,455	+		Sama_1322	0.87	-0.9
1,611,783	+				+1.5
1,611,783	+				-0.3
1,611,783	+				-2.4
1,611,783	+				-0.3
1,611,783	+				+1.2
1,611,784	-				-0.1
1,611,784	-				+1.6
1,611,821	+				+2.3
1,611,869	+				-0.9
1,611,869	+				-1.1
1,611,869	+				-1.2
1,611,870	-				+0.1
1,611,870	-				+0.1
1,611,870	-				-0.3
1,611,870	-				+1.1
1,611,870	-				-0.6
1,612,052	-		Sama_1323	0.22	-0.9
1,612,104	+		Sama_1323	0.28	+0.3
1,612,105	-		Sama_1323	0.29	-0.9
1,612,105	-		Sama_1323	0.29	+0.4
1,612,117	-		Sama_1323	0.30	-1.7
1,612,117	-		Sama_1323	0.30	-1.3
1,612,159	+		Sama_1323	0.36	+0.1
1,612,214	+		Sama_1323	0.43	+1.3
1,612,214	+		Sama_1323	0.43	-0.9
1,612,215	-		Sama_1323	0.43	-0.2
1,612,215	-		Sama_1323	0.43	+1.7
1,612,215	-		Sama_1323	0.43	-0.1
1,612,225	+		Sama_1323	0.44	-0.6
1,612,225	+		Sama_1323	0.44	+0.7
1,612,252	+		Sama_1323	0.48	-0.9
1,612,329	-		Sama_1323	0.57	-1.9
1,612,376	+		Sama_1323	0.64	+0.8
1,612,377	-		Sama_1323	0.64	-0.6
1,612,377	-		Sama_1323	0.64	-1.1
1,612,492	+		Sama_1323	0.79	-0.8
1,612,492	+		Sama_1323	0.79	-1.6
1,612,493	-		Sama_1323	0.79	-0.9
1,612,493	-		Sama_1323	0.79	-2.1
1,612,526	+		Sama_1323	0.83	-0.3
1,612,555	+		Sama_1323	0.87	-2.5
1,612,653	-				-0.8
1,612,653	-				-0.2
1,612,657	+				+1.2
1,612,657	+				-1.1
1,612,658	-				-1.1
1,612,658	-				+0.0
1,612,658	-				-0.7
1,612,658	-				+0.2
1,612,658	-				+1.0
1,612,658	-				+0.0
1,612,658	-				-0.5
1,612,693	-				-0.8
1,612,697	+				+0.9
1,612,698	-				+0.4
1,612,710	+				-1.4
1,612,710	+				-0.2
1,612,711	-				-0.7
1,612,711	-				-1.2
1,612,711	-				-0.8
1,612,715	+				+0.1
1,612,715	+				-0.5
1,612,715	+				-0.0
1,612,715	+				-0.8
1,612,716	-				-0.5
1,612,716	-				-0.6
1,612,716	-				-0.0
1,612,716	-				-1.1
1,612,716	-				+0.3
1,612,716	-				-0.2
1,612,716	-				+0.2
1,612,716	-				-0.4
1,612,716	-				-1.5
1,612,716	-				-0.1
1,612,716	-				-0.8
1,612,716	-				-1.5
1,612,716	-				-2.5
1,612,716	-				-0.2
1,612,719	+				-0.7
1,612,719	+				+0.2
1,612,719	+				-0.6
1,612,719	+				-0.3
1,612,720	-				+0.9
1,612,720	-				-1.4
1,612,720	-				-0.3
1,612,720	-				+2.5
1,612,720	-				+0.9
1,612,774	-				-0.9