Strain Fitness in Shewanella amazonensis SB2B around Sama_1236

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,520,038	-		Sama_1235	0.48	-0.9
1,520,123	-		Sama_1235	0.53	+2.4
1,520,154	-		Sama_1235	0.55	+2.2
1,520,154	-		Sama_1235	0.55	+2.5
1,520,167	+		Sama_1235	0.56	+3.3
1,520,216	+		Sama_1235	0.59	+4.4
1,520,231	+		Sama_1235	0.60	+2.7
1,520,232	-		Sama_1235	0.60	+1.7
1,520,530	+		Sama_1235	0.78	-0.5
1,520,531	-		Sama_1235	0.78	+3.6
1,520,660	-		Sama_1235	0.86	+2.3
1,520,663	-		Sama_1235	0.86	+1.6
1,520,663	-		Sama_1235	0.86	+1.2
1,520,663	-		Sama_1235	0.86	+2.3
1,520,702	+		Sama_1235	0.88	+3.8
1,520,705	-		Sama_1235	0.89	+0.4
1,520,705	-		Sama_1235	0.89	+3.2
1,520,725	+		Sama_1235	0.90	+1.8
1,520,725	+		Sama_1235	0.90	+2.3
1,520,726	-		Sama_1235	0.90	+2.4
1,520,726	-		Sama_1235	0.90	+2.3
1,520,773	-				+1.5
1,520,787	-				+2.4
1,520,930	-				+0.6
1,520,961	+				+0.2
1,520,961	+				+1.4
1,520,961	+				-0.0
1,520,961	+				-0.9
1,520,961	+				+0.7
1,520,962	-				-0.0
1,520,962	-				+0.8
1,520,962	-				-0.2
1,521,012	+				-3.2
1,521,012	+				-2.6
1,521,013	-				-2.4
1,521,013	-				-3.2
1,521,232	+		Sama_1236	0.25	-1.9
1,521,278	+		Sama_1236	0.30	-3.1
1,521,278	+		Sama_1236	0.30	-3.2
1,521,278	+		Sama_1236	0.30	-3.4
1,521,278	+		Sama_1236	0.30	-1.5
1,521,279	-		Sama_1236	0.30	-0.9
1,521,279	-		Sama_1236	0.30	-3.0
1,521,279	-		Sama_1236	0.30	-3.2
1,521,279	-		Sama_1236	0.30	-4.6
1,521,279	-		Sama_1236	0.30	-0.5
1,521,279	-		Sama_1236	0.30	-2.2
1,521,279	-		Sama_1236	0.30	-2.5
1,521,279	-		Sama_1236	0.30	-3.8
1,521,279	-		Sama_1236	0.30	-0.5
1,521,329	+		Sama_1236	0.34	-2.2
1,521,330	-		Sama_1236	0.34	-0.9
1,521,355	+		Sama_1236	0.37	-1.2
1,521,415	-		Sama_1236	0.42	+0.7
1,521,472	+		Sama_1236	0.48	-1.7
1,521,472	+		Sama_1236	0.48	-2.6
1,521,473	-		Sama_1236	0.48	-2.9
1,521,473	-		Sama_1236	0.48	-4.1
1,521,473	-		Sama_1236	0.48	-3.2
1,521,572	+		Sama_1236	0.57	-3.7
1,521,572	+		Sama_1236	0.57	-4.1
1,521,572	+		Sama_1236	0.57	-4.2
1,521,573	-		Sama_1236	0.57	-1.7
1,521,643	-		Sama_1236	0.64	-1.9
1,521,643	-		Sama_1236	0.64	-1.2
1,521,651	+		Sama_1236	0.64	-2.6
1,521,652	-		Sama_1236	0.64	-1.7
1,521,658	+		Sama_1236	0.65	-2.2
1,521,683	-		Sama_1236	0.67	-3.2
1,521,845	-		Sama_1236	0.82	-3.8
1,521,872	+		Sama_1236	0.85	-3.2
1,521,872	+		Sama_1236	0.85	-1.5
1,521,873	-		Sama_1236	0.85	-2.2
1,521,876	+		Sama_1236	0.85	-3.0
1,521,877	-		Sama_1236	0.85	-2.1
1,521,877	-		Sama_1236	0.85	-0.9
1,521,877	-		Sama_1236	0.85	-2.2
1,521,877	-		Sama_1236	0.85	-3.7
1,521,983	+				-1.2
1,522,001	+				-2.6
1,522,002	-				-3.9
1,522,002	-				-0.9
1,522,002	-				-1.7
1,522,047	+				-2.5
1,522,077	-				-1.2
1,522,077	-				-1.6
1,522,090	+				-2.2
1,522,090	+				-2.2
1,522,167	+				+2.4
1,522,190	+				+0.1
1,522,190	+				-1.3
1,522,190	+				-1.5
1,522,190	+				+0.3
1,522,190	+				+1.7
1,522,191	-				-0.9
1,522,192	+				+0.7
1,522,192	+				-1.1
1,522,192	+				-0.5
1,522,192	+				+0.2
1,522,192	+				+0.0
1,522,192	+				-0.6
1,522,192	+				-0.2
1,522,193	-				-1.7
1,522,241	+				-1.5
1,522,483	+		Sama_1237	0.40	-1.1
1,522,502	+		Sama_1237	0.43	-2.2
1,522,514	+		Sama_1237	0.45	-0.1
1,522,514	+		Sama_1237	0.45	+0.6
1,522,550	+		Sama_1237	0.50	-1.9
1,522,550	+		Sama_1237	0.50	+1.1
1,522,573	+		Sama_1237	0.53	-1.8
1,522,690	+		Sama_1237	0.70	-2.6
1,522,720	-		Sama_1237	0.75	-3.4
1,522,890	+				-0.1
1,522,916	+				-3.7
1,522,916	+				-3.7
1,522,916	+				-0.9
1,522,930	+				-1.3
1,522,930	+				-4.2
1,522,930	+				-4.6
1,522,930	+				-2.7
1,522,930	+				-0.5
1,522,930	+				-2.8
1,522,930	+				-1.5
1,522,930	+				-3.4
1,522,930	+				-2.8
1,522,930	+				-3.0
1,522,930	+				-4.9
1,522,931	-				-1.2
1,522,931	-				-2.9
1,522,931	-				-0.5
1,522,931	-				-2.0
1,522,946	+	pspB	Sama_1238	0.12	-3.2
1,522,949	+	pspB	Sama_1238	0.13	-4.2
1,522,949	+	pspB	Sama_1238	0.13	-2.2
1,522,963	+	pspB	Sama_1238	0.19	-1.2
1,522,964	-	pspB	Sama_1238	0.20	-4.2