Strain Fitness in Shewanella amazonensis SB2B around Sama_1228

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,510,591	+		Sama_1226	0.90	-0.5
1,510,591	+		Sama_1226	0.90	-2.4
1,510,591	+		Sama_1226	0.90	-1.9
1,510,591	+		Sama_1226	0.90	-2.7
1,510,844	+				-1.1
1,510,901	+				-2.2
1,510,902	-				-2.7
1,510,967	+				-0.7
1,511,017	+				-1.1
1,511,039	+				-3.3
1,511,358	+				-2.8
1,511,358	+				-3.4
1,511,361	+				-3.4
1,511,377	+				-2.7
1,511,494	+				-1.7
1,511,494	+				-0.5
1,512,264	-		Sama_1228	0.38	-2.4
1,512,626	+		Sama_1228	0.58	-2.9
1,512,626	+		Sama_1228	0.58	-0.9
1,512,700	+		Sama_1228	0.62	-2.6
1,512,790	+		Sama_1228	0.67	-0.5
1,513,189	+		Sama_1228	0.88	-1.7
1,513,334	+				-1.5
1,513,336	+				-2.8
1,513,412	+				-0.5
1,513,413	-				-0.2
1,513,413	-				+0.8
1,513,425	+				-0.4
1,513,425	+				+0.0
1,513,426	-				+0.4
1,513,426	-				+2.1
1,513,426	-				-0.2
1,513,495	+				+0.9
1,513,496	-				+0.5
1,513,505	+				+0.4
1,513,505	+				-0.7
1,513,506	-				+0.7
1,513,506	-				+0.0
1,513,506	-				+1.8
1,513,542	+				-0.2
1,513,650	+		Sama_1229	0.19	-0.3
1,513,650	+		Sama_1229	0.19	+0.6
1,513,650	+		Sama_1229	0.19	-1.1
1,513,650	+		Sama_1229	0.19	-0.2
1,513,650	+		Sama_1229	0.19	-1.1
1,513,651	-		Sama_1229	0.19	-0.9
1,513,651	-		Sama_1229	0.19	-0.1
1,513,716	+		Sama_1229	0.29	-0.4
1,513,717	-		Sama_1229	0.29	-1.2
1,513,737	-		Sama_1229	0.32	-0.9
1,513,749	+		Sama_1229	0.34	-1.2
1,513,749	+		Sama_1229	0.34	-1.4
1,513,749	+		Sama_1229	0.34	-0.7
1,513,750	-		Sama_1229	0.34	-0.2
1,513,750	-		Sama_1229	0.34	-2.4
1,513,750	-		Sama_1229	0.34	+0.8
1,513,750	-		Sama_1229	0.34	-0.9
1,513,750	-		Sama_1229	0.34	-1.5
1,513,750	-		Sama_1229	0.34	+1.7
1,513,750	-		Sama_1229	0.34	-0.0
1,513,750	-		Sama_1229	0.34	+0.1
1,513,750	-		Sama_1229	0.34	-0.5
1,513,750	-		Sama_1229	0.34	-0.9
1,513,750	-		Sama_1229	0.34	+0.1
1,513,752	+		Sama_1229	0.34	-0.2
1,513,752	+		Sama_1229	0.34	-0.6
1,513,752	+		Sama_1229	0.34	-0.7
1,513,753	-		Sama_1229	0.34	+0.1
1,513,753	-		Sama_1229	0.34	-0.9
1,513,821	+		Sama_1229	0.45	+1.7
1,513,821	+		Sama_1229	0.45	+0.1
1,513,823	+		Sama_1229	0.45	+0.2
1,513,823	+		Sama_1229	0.45	+1.4
1,513,823	+		Sama_1229	0.45	-0.7
1,513,824	-		Sama_1229	0.45	+0.3
1,513,824	-		Sama_1229	0.45	-1.1
1,513,824	-		Sama_1229	0.45	+0.5
1,513,824	-		Sama_1229	0.45	-1.2
1,513,824	-		Sama_1229	0.45	-0.9
1,513,824	-		Sama_1229	0.45	-0.6
1,513,826	+		Sama_1229	0.46	-1.4
1,513,826	+		Sama_1229	0.46	+0.5
1,513,826	+		Sama_1229	0.46	-1.5
1,513,827	-		Sama_1229	0.46	-1.6
1,513,827	-		Sama_1229	0.46	+0.6
1,513,834	-		Sama_1229	0.47	+0.4
1,513,863	+		Sama_1229	0.51	-0.3
1,513,864	-		Sama_1229	0.51	-1.7
1,513,887	-		Sama_1229	0.55	+2.1
1,513,959	+		Sama_1229	0.66	+0.7
1,514,017	-		Sama_1229	0.75	+1.1
1,514,028	-		Sama_1229	0.76	+0.4
1,514,083	+		Sama_1229	0.85	-0.5
1,514,103	+		Sama_1229	0.88	+1.3
1,514,119	+				+1.1
1,514,119	+				+0.4
1,514,119	+				-0.7
1,514,119	+				+0.1
1,514,120	-				-1.1
1,514,120	-				+0.2
1,514,123	+				+0.2
1,514,123	+				-0.4
1,514,123	+				-0.6
1,514,124	-				-1.1
1,514,124	-				-0.6
1,514,124	-				-0.7
1,514,140	+				-2.0
1,514,216	-				-1.5
1,514,219	-				-0.1
1,514,219	-				+0.3
1,514,219	-				-1.2
1,514,219	-				+0.7
1,514,280	-				-0.2