Strain Fitness in Shewanella amazonensis SB2B around Sama_0913

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,102,774	-	pgi	Sama_0912	0.81	+0.7
1,102,836	-	pgi	Sama_0912	0.85	-1.4
1,104,110	-				+0.2
1,104,110	-				+0.7
1,104,110	-				+0.2
1,104,163	-				-0.3
1,104,199	+				-1.1
1,104,211	+				+0.2
1,104,211	+				-0.9
1,104,211	+				+0.2
1,104,266	-				+0.6
1,104,410	-		Sama_0914	0.13	-0.8
1,104,410	-		Sama_0914	0.13	+0.1
1,104,469	+		Sama_0914	0.19	-2.0
1,104,470	-		Sama_0914	0.19	-1.5
1,104,470	-		Sama_0914	0.19	-0.9
1,104,539	-		Sama_0914	0.25	-0.2
1,104,539	-		Sama_0914	0.25	+0.2
1,104,539	-		Sama_0914	0.25	-1.3
1,104,539	-		Sama_0914	0.25	-0.2
1,104,539	-		Sama_0914	0.25	-1.4
1,104,539	-		Sama_0914	0.25	-0.4
1,104,566	-		Sama_0914	0.27	-0.6
1,104,644	-		Sama_0914	0.34	-1.4
1,104,644	-		Sama_0914	0.34	-1.1
1,104,644	-		Sama_0914	0.34	-2.1
1,104,658	+		Sama_0914	0.36	-1.4
1,104,659	-		Sama_0914	0.36	+0.1
1,104,715	-		Sama_0914	0.41	-3.8
1,104,794	-		Sama_0914	0.48	-0.5
1,104,815	-		Sama_0914	0.50	-0.5
1,104,897	-		Sama_0914	0.57	-2.3
1,104,909	-		Sama_0914	0.58	-3.3
1,104,909	-		Sama_0914	0.58	+0.0
1,104,911	-		Sama_0914	0.58	-1.1
1,104,928	-		Sama_0914	0.60	-1.0
1,104,928	-		Sama_0914	0.60	-1.6
1,104,956	-		Sama_0914	0.63	+1.2
1,104,956	-		Sama_0914	0.63	-1.8
1,104,959	-		Sama_0914	0.63	+0.6
1,104,959	-		Sama_0914	0.63	-0.8
1,104,959	-		Sama_0914	0.63	-1.0
1,104,959	-		Sama_0914	0.63	-2.6
1,104,963	-		Sama_0914	0.63	-0.8
1,104,963	-		Sama_0914	0.63	+0.8
1,104,963	-		Sama_0914	0.63	-1.1
1,104,963	-		Sama_0914	0.63	-0.8
1,104,963	-		Sama_0914	0.63	-1.0
1,104,986	-		Sama_0914	0.65	-0.2
1,104,995	-		Sama_0914	0.66	-1.6
1,104,995	-		Sama_0914	0.66	-1.4
1,104,995	-		Sama_0914	0.66	-0.8
1,104,995	-		Sama_0914	0.66	-1.1
1,104,995	-		Sama_0914	0.66	-2.7