Strain Fitness in Shewanella amazonensis SB2B around Sama_0840

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,024,577	-				+0.2
1,024,577	-				+0.1
1,024,577	-				-1.1
1,024,577	-				-0.6
1,024,605	-				-0.3
1,024,791	-		Sama_0840	0.21	-2.1
1,024,791	-		Sama_0840	0.21	-1.9
1,024,791	-		Sama_0840	0.21	+2.1
1,024,800	-		Sama_0840	0.22	-3.5
1,024,800	-		Sama_0840	0.22	-3.3
1,024,901	-		Sama_0840	0.32	-3.4
1,024,956	-		Sama_0840	0.37	-1.8
1,025,024	+		Sama_0840	0.44	-2.2
1,025,070	+		Sama_0840	0.49	-2.1
1,025,071	-		Sama_0840	0.49	-2.7
1,025,071	-		Sama_0840	0.49	-1.9
1,025,071	-		Sama_0840	0.49	-3.5
1,025,087	+		Sama_0840	0.50	-1.8
1,025,124	-		Sama_0840	0.54	-1.4
1,025,130	-		Sama_0840	0.54	-3.6
1,025,293	+		Sama_0840	0.70	-3.4
1,025,294	-		Sama_0840	0.70	-1.9
1,025,294	-		Sama_0840	0.70	-2.6
1,025,294	-		Sama_0840	0.70	-2.8
1,025,294	-		Sama_0840	0.70	-2.6
1,025,454	+		Sama_0840	0.86	-1.4
1,025,455	-		Sama_0840	0.86	-3.7
1,025,498	-				-3.9
1,025,507	+				-0.8
1,025,508	-				-3.4
1,025,528	+				-3.2
1,025,529	-				-3.8
1,025,560	-				-1.1
1,025,654	+				-3.3
1,025,655	-				-0.9
1,025,655	-				-0.6
1,025,655	-				-1.0
1,025,658	+				-0.4
1,025,659	-				-1.8
1,025,659	-				-2.9
1,025,680	+				-2.5
1,025,680	+				-2.3
1,025,680	+				-3.7
1,025,681	-				-0.2
1,025,681	-				-0.1
1,025,681	-				+0.7
1,025,681	-				+0.3
1,025,681	-				-0.1
1,025,683	-				+0.5
1,025,683	-				-0.5
1,025,683	-				+1.6
1,025,718	-				-0.6
1,025,723	-				-1.9
1,025,765	+				-1.6
1,025,765	+				+1.7
1,025,804	-				+0.7
1,025,814	+				+1.1
1,025,815	-				+0.9
1,025,856	+				-0.2
1,025,856	+				+0.5
1,025,857	-				+0.9
1,025,857	-				-2.5
1,025,857	-				+0.2
1,025,909	+		Sama_0841	0.10	+0.4
1,025,909	+		Sama_0841	0.10	+0.4
1,025,910	-		Sama_0841	0.10	+1.5
1,025,910	-		Sama_0841	0.10	-0.2
1,025,910	-		Sama_0841	0.10	-0.7
1,025,910	-		Sama_0841	0.10	+0.5
1,026,117	+		Sama_0841	0.22	+1.0
1,026,117	+		Sama_0841	0.22	+0.6
1,026,117	+		Sama_0841	0.22	+0.0
1,026,118	-		Sama_0841	0.22	+2.5
1,026,118	-		Sama_0841	0.22	+0.1
1,026,118	-		Sama_0841	0.22	+1.3
1,026,177	+		Sama_0841	0.26	+0.5
1,026,177	+		Sama_0841	0.26	+1.0
1,026,178	-		Sama_0841	0.26	-0.2
1,026,224	-		Sama_0841	0.28	-0.0
1,026,224	-		Sama_0841	0.28	+1.0
1,026,241	+		Sama_0841	0.29	+1.0
1,026,241	+		Sama_0841	0.29	-0.3
1,026,242	-		Sama_0841	0.30	-1.1
1,026,242	-		Sama_0841	0.30	+2.2
1,026,242	-		Sama_0841	0.30	+2.5
1,026,314	+		Sama_0841	0.34	-0.2
1,026,314	+		Sama_0841	0.34	+1.1
1,026,315	-		Sama_0841	0.34	-1.6
1,026,315	-		Sama_0841	0.34	-0.1
1,026,315	-		Sama_0841	0.34	+1.1
1,026,322	-		Sama_0841	0.34	+1.9
1,026,322	-		Sama_0841	0.34	+0.8
1,026,333	+		Sama_0841	0.35	+1.1
1,026,333	+		Sama_0841	0.35	+1.5
1,026,333	+		Sama_0841	0.35	+0.5
1,026,333	+		Sama_0841	0.35	+0.8
1,026,334	-		Sama_0841	0.35	+1.0
1,026,334	-		Sama_0841	0.35	+1.6
1,026,334	-		Sama_0841	0.35	+0.1
1,026,334	-		Sama_0841	0.35	-0.4
1,026,368	-		Sama_0841	0.37	+0.4
1,026,368	-		Sama_0841	0.37	+0.6
1,026,379	+		Sama_0841	0.38	+0.1
1,026,405	+		Sama_0841	0.39	+0.5
1,026,418	+		Sama_0841	0.40	-0.0
1,026,455	-		Sama_0841	0.42	-0.4
1,026,518	-		Sama_0841	0.46	-0.9
1,026,581	-		Sama_0841	0.49	+0.2
1,026,581	-		Sama_0841	0.49	-0.1
1,026,586	+		Sama_0841	0.50	-0.1
1,026,586	+		Sama_0841	0.50	+1.0