Strain Fitness in Shewanella amazonensis SB2B around Sama_0832

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,014,278	-		Sama_0830	0.78	-2.7
1,014,300	+		Sama_0830	0.83	+0.6
1,014,300	+		Sama_0830	0.83	-2.7
1,014,300	+		Sama_0830	0.83	+0.4
1,014,301	-		Sama_0830	0.83	-2.2
1,014,301	-		Sama_0830	0.83	-2.1
1,014,384	+				-0.7
1,014,384	+				-1.4
1,014,384	+				-2.6
1,014,384	+				+0.5
1,014,384	+				+2.2
1,014,387	+				-3.4
1,014,388	-				-3.9
1,014,395	+				-2.2
1,014,395	+				-3.9
1,014,395	+				-1.4
1,014,395	+				-2.1
1,014,395	+				-2.4
1,014,395	+				-4.2
1,014,395	+				-1.9
1,014,398	+				-1.4
1,014,399	-				-2.8
1,014,404	+				-0.8
1,014,419	+				-1.8
1,014,419	+				-4.3
1,014,419	+				-2.7
1,014,420	-				-2.9
1,014,420	-				-3.4
1,014,431	+				-3.2
1,014,746	-		Sama_0831	0.43	-2.6
1,014,755	+		Sama_0831	0.44	-2.5
1,014,764	+		Sama_0831	0.46	-3.2
1,014,764	+		Sama_0831	0.46	-0.8
1,014,822	+		Sama_0831	0.53	-3.9
1,014,822	+		Sama_0831	0.53	-2.8
1,014,905	+		Sama_0831	0.63	-1.4
1,014,905	+		Sama_0831	0.63	+1.2
1,014,906	-		Sama_0831	0.63	-2.1
1,014,906	-		Sama_0831	0.63	-3.1
1,014,906	-		Sama_0831	0.63	-1.8
1,014,908	+		Sama_0831	0.64	-3.0
1,014,908	+		Sama_0831	0.64	-3.1
1,015,090	-		Sama_0831	0.86	-0.4
1,015,090	-		Sama_0831	0.86	-2.6
1,015,097	+		Sama_0831	0.87	-1.1
1,015,097	+		Sama_0831	0.87	-3.8
1,015,101	+		Sama_0831	0.88	-3.3
1,015,102	-		Sama_0831	0.88	-2.9
1,015,118	+		Sama_0831	0.90	-2.1
1,015,171	+				-1.9
1,015,171	+				-4.5
1,015,172	-				-2.8
1,015,172	-				-1.9
1,015,187	+				-2.1
1,015,191	+				-2.5
1,015,200	+				-1.6
1,015,200	+				-3.5
1,015,200	+				-1.7
1,015,200	+				-1.2
1,015,208	+				-1.6
1,015,208	+				-1.0
1,015,209	-				-2.7
1,015,213	-				+0.6
1,015,253	+				+1.2
1,015,254	-				-2.1
1,015,382	+		Sama_0832	0.14	+1.7
1,015,382	+		Sama_0832	0.14	+0.8
1,015,382	+		Sama_0832	0.14	+1.4
1,015,383	-		Sama_0832	0.14	-2.9
1,015,383	-		Sama_0832	0.14	-0.9
1,015,383	-		Sama_0832	0.14	+0.2
1,015,473	+		Sama_0832	0.25	+0.8
1,015,473	+		Sama_0832	0.25	-1.9
1,015,474	-		Sama_0832	0.26	-1.8
1,015,474	-		Sama_0832	0.26	-1.0
1,015,603	+		Sama_0832	0.41	-0.2
1,015,603	+		Sama_0832	0.41	-1.0
1,015,604	-		Sama_0832	0.42	-2.4
1,015,608	+		Sama_0832	0.42	+0.3
1,015,608	+		Sama_0832	0.42	+1.2
1,015,609	-		Sama_0832	0.42	-1.1
1,015,609	-		Sama_0832	0.42	-0.2
1,015,609	-		Sama_0832	0.42	+0.3
1,015,609	-		Sama_0832	0.42	-2.7
1,015,738	+		Sama_0832	0.58	+0.6
1,015,739	-		Sama_0832	0.58	+1.7
1,015,791	+		Sama_0832	0.64	-1.6
1,015,844	+		Sama_0832	0.71	-1.2
1,015,845	-		Sama_0832	0.71	-0.8
1,015,902	+		Sama_0832	0.78	+0.5
1,015,902	+		Sama_0832	0.78	+1.4
1,015,903	-		Sama_0832	0.78	-1.4
1,015,956	+		Sama_0832	0.85	-2.0
1,015,956	+		Sama_0832	0.85	-0.8
1,015,957	-		Sama_0832	0.85	-1.0
1,015,959	+		Sama_0832	0.85	-0.2
1,015,960	-		Sama_0832	0.85	+0.1
1,016,004	+				+0.9
1,016,004	+				+0.9
1,016,078	+				+0.8
1,016,078	+				+0.6
1,016,078	+				-0.1
1,016,166	-				-1.1
1,016,166	-				-0.8
1,016,166	-				+0.0
1,016,166	-				-0.6
1,016,166	-				-0.1
1,016,166	-				+0.4
1,016,166	-				+0.5
1,016,166	-				-1.4
1,016,166	-				-3.2
1,016,175	-				+0.1
1,016,175	-				-0.6
1,016,175	-				-0.4
1,016,175	-				-1.2
1,016,186	-				-1.5
1,016,186	-				-1.8
1,016,186	-				-1.9
1,016,186	-				-0.6
1,016,186	-				-1.3
1,016,186	-				-1.2
1,016,186	-				-2.6
1,016,187	-				-0.4
1,016,300	-		Sama_0833	0.52	-2.9
1,016,300	-		Sama_0833	0.52	-1.9
1,016,300	-		Sama_0833	0.52	-0.5
1,016,440	+				-0.6
1,016,445	+				-0.1
1,016,445	+				+0.2
1,016,446	-				-1.4
1,016,446	-				+0.8
1,016,446	-				+0.6
1,016,446	-				+0.4
1,016,446	-				-0.3
1,016,446	-				-0.9
1,016,446	-				-0.5
1,016,446	-				-0.9
1,016,446	-				-0.9
1,016,446	-				-0.6
1,016,494	-				+0.3
1,016,494	-				-1.6
1,016,494	-				-0.5
1,016,494	-				-1.9
1,016,494	-				+0.6
1,016,494	-				-0.6
1,016,524	-				+0.3
1,016,542	+				+1.2
1,016,548	+				+0.8
1,016,549	-				-0.9
1,016,552	+				+0.9
1,016,552	+				-0.2
1,016,553	-				+1.2
1,016,553	-				-0.4
1,016,619	+				+0.4
1,016,620	-				+1.1
1,016,682	+				+0.2
1,016,682	+				-0.7